| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92115271
Identifier: 92115271
GI number: 92115271
Start: 3521569
End: 3522066
Strand: Direct
Name: 92115271
Synonym: Csal_3156
Alternate gene names: NA
Gene position: 3521569-3522066 (Clockwise)
Preceding gene: 92115270
Following gene: 92115272
Centisome position: 95.26
GC content: 70.08
Gene sequence:
>498_bases ATGAGCCGGCACCGCGTGCGTCCTCGCGTCTGGCTCCTTGCGCTCTGCCTGTCGCTGGCGGGGTGCGCGGGTCTCGATGA AGAACCGCGCAACATGCGCCAGGCCGTGTACGGCATGAGCAGCCAGGCCGCCGAGGCGCTGCTTGCCTCGCCCCCCTGGT CGGGGATGTCGCAGGACATGGTCGTGATGCTCGCGCCGCCGACGGTCGACGCGACGCTCGGCATCAGTGCGGGAAGGCTC ACCGAGACGCTGGGCCGCGCACTGCTGGCACTGGAGGACGGTCCCCAGGTCCTCGACTGGACACCCTCGATGATGGCCGA CGACGCGCCGGCCAATCACTGGATCCTCGAAAGCCGCCTGGACGGCAACGGCGTGATCCGGCTGTCGGATCGCGAGCTGC TGCCCTATCAGTGGGAAATCACGCTACGCCGCCCCGGTGAGGAGGCCCCCAGCTGGCGGGCCACCCTCGCCGGGGCACTG GATGCCAGCGCGTTGTAG
Upstream 100 bases:
>100_bases ATACGCTTTTCGAGGAATTGGCCGCCTTTCTGGCACGCTACGAGCGGCAGGCCGGCACCTCGCGGGGCACGTCCGCCGAC GCCTGCTCACGGGAATCGCC
Downstream 100 bases:
>100_bases CCGGCACGGGCCCGGCCACGTTGTTTCAGGCCCGTCACGGTCGCACAATGCGCCTTTTGCCCTCAGGAGTCTTGCATGTC CCGCTATGCTCGCCACCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSRHRVRPRVWLLALCLSLAGCAGLDEEPRNMRQAVYGMSSQAAEALLASPPWSGMSQDMVVMLAPPTVDATLGISAGRL TETLGRALLALEDGPQVLDWTPSMMADDAPANHWILESRLDGNGVIRLSDRELLPYQWEITLRRPGEEAPSWRATLAGAL DASAL
Sequences:
>Translated_165_residues MSRHRVRPRVWLLALCLSLAGCAGLDEEPRNMRQAVYGMSSQAAEALLASPPWSGMSQDMVVMLAPPTVDATLGISAGRL TETLGRALLALEDGPQVLDWTPSMMADDAPANHWILESRLDGNGVIRLSDRELLPYQWEITLRRPGEEAPSWRATLAGAL DASAL >Mature_164_residues SRHRVRPRVWLLALCLSLAGCAGLDEEPRNMRQAVYGMSSQAAEALLASPPWSGMSQDMVVMLAPPTVDATLGISAGRLT ETLGRALLALEDGPQVLDWTPSMMADDAPANHWILESRLDGNGVIRLSDRELLPYQWEITLRRPGEEAPSWRATLAGALD ASAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17932; Mature: 17801
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRHRVRPRVWLLALCLSLAGCAGLDEEPRNMRQAVYGMSSQAAEALLASPPWSGMSQDM CCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE VVMLAPPTVDATLGISAGRLTETLGRALLALEDGPQVLDWTPSMMADDAPANHWILESRL EEEEECCCCCEECCCCCHHHHHHHHHHEEEECCCCCEEECCCHHHCCCCCCCCEEEEEEE DGNGVIRLSDRELLPYQWEITLRRPGEEAPSWRATLAGALDASAL CCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure SRHRVRPRVWLLALCLSLAGCAGLDEEPRNMRQAVYGMSSQAAEALLASPPWSGMSQDM CCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCE VVMLAPPTVDATLGISAGRLTETLGRALLALEDGPQVLDWTPSMMADDAPANHWILESRL EEEEECCCCCEECCCCCHHHHHHHHHHEEEECCCCCEEECCCHHHCCCCCCCCEEEEEEE DGNGVIRLSDRELLPYQWEITLRRPGEEAPSWRATLAGALDASAL CCCCEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA