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The map label for this gene is yigB [H]

Identifier: 92115231

GI number: 92115231

Start: 3470824

End: 3471573

Strand: Direct

Name: yigB [H]

Synonym: Csal_3116

Alternate gene names: 92115231

Gene position: 3470824-3471573 (Clockwise)

Preceding gene: 92115230

Following gene: 92115233

Centisome position: 93.89

GC content: 69.2

Gene sequence:

>750_bases
ATGGCGATCACCGCCCTCACTTTCGATCTCGACGACACCCTCTGGGACAACCGCCCCATTCTCGAACGCGCCGAGGCCGA
ACATTACCAGTGGCTCAGCGAGGCCATCGCCGCCGCCCAGACGTCACCGCAGACATCCTTCGGGGACTGCTATCCCCTGA
GCGCTTACCAGCAGCATCGCGCCGACGTGGCGCGTCGTCATCCGCTCAAGCGCGGTGATTTCACGTGGATTCGCGAACGT
GCGCTGTTCGAGCTTGTAGAGGCCTACGGGCTACCCCGACTCCAGGCCCGCCTCTGGGCCGCGCATGCCATCGCCCACTT
CCTCGACCTGCGTCACGACCTCACGCCCTACCCGGACGTCGTGCCCCTGCTCGACGCCCTGCGGCAGCGCTATCGTCTCG
CCGCAATCACCAACGGCAACGCCGACCTCAAACGGCTGGCGCTGGCCGAACACTTTCCGGTGATGATCGCGGCGGGAGAA
CTGCACGCTCCCAAGCCCGACCCGCGTGCCTTTCTCGCGGCGCTGGCACGCCTCGGCGCCACGCCATCGCGCGCCCTGCA
TGTCGGAGACTCCTGGCGGGAAGACGTGCTGCCGGCGCAGCGCCTGGGCATGCAGGTGGCCTGGGTCGATGCCAAGGACG
AGGGCCCCCGCGCGCTGCCGCCCGGGGTCCACCGTCTCGCCCATGTACGCGAGCTGCCGGCCCTGCTCGACCGCCTGACC
ACGCAGGACAGCGCGCGCCAGGGGGGCTGA

Upstream 100 bases:

>100_bases
CTGGCAGCATCTGGCCGATGCCTACGATCAGGCGCACCCCCGCGCCCGGCGTCGCGCGCCACCGGACGACACCTGACACC
GCCGCCCCGGAGAATGCCCC

Downstream 100 bases:

>100_bases
CGCTCACTGCGCCTGGTGCAACAGCCATGCATCCATGCGCGCCCGCGCTTCATCGACGCCTTGTCGCTTGAGTGCCGAGA
ACAGCTGCACGCTGACCAGG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MAITALTFDLDDTLWDNRPILERAEAEHYQWLSEAIAAAQTSPQTSFGDCYPLSAYQQHRADVARRHPLKRGDFTWIRER
ALFELVEAYGLPRLQARLWAAHAIAHFLDLRHDLTPYPDVVPLLDALRQRYRLAAITNGNADLKRLALAEHFPVMIAAGE
LHAPKPDPRAFLAALARLGATPSRALHVGDSWREDVLPAQRLGMQVAWVDAKDEGPRALPPGVHRLAHVRELPALLDRLT
TQDSARQGG

Sequences:

>Translated_249_residues
MAITALTFDLDDTLWDNRPILERAEAEHYQWLSEAIAAAQTSPQTSFGDCYPLSAYQQHRADVARRHPLKRGDFTWIRER
ALFELVEAYGLPRLQARLWAAHAIAHFLDLRHDLTPYPDVVPLLDALRQRYRLAAITNGNADLKRLALAEHFPVMIAAGE
LHAPKPDPRAFLAALARLGATPSRALHVGDSWREDVLPAQRLGMQVAWVDAKDEGPRALPPGVHRLAHVRELPALLDRLT
TQDSARQGG
>Mature_248_residues
AITALTFDLDDTLWDNRPILERAEAEHYQWLSEAIAAAQTSPQTSFGDCYPLSAYQQHRADVARRHPLKRGDFTWIRERA
LFELVEAYGLPRLQARLWAAHAIAHFLDLRHDLTPYPDVVPLLDALRQRYRLAAITNGNADLKRLALAEHFPVMIAAGEL
HAPKPDPRAFLAALARLGATPSRALHVGDSWREDVLPAQRLGMQVAWVDAKDEGPRALPPGVHRLAHVRELPALLDRLTT
QDSARQGG

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Escherichia coli, GI2367295, Length=207, Percent_Identity=31.4009661835749, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27896; Mature: 27765

Theoretical pI: Translated: 7.14; Mature: 7.14

Prosite motif: PS00139 THIOL_PROTEASE_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITALTFDLDDTLWDNRPILERAEAEHYQWLSEAIAAAQTSPQTSFGDCYPLSAYQQHR
CEEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ADVARRHPLKRGDFTWIRERALFELVEAYGLPRLQARLWAAHAIAHFLDLRHDLTPYPDV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VPLLDALRQRYRLAAITNGNADLKRLALAEHFPVMIAAGELHAPKPDPRAFLAALARLGA
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCC
TPSRALHVGDSWREDVLPAQRLGMQVAWVDAKDEGPRALPPGVHRLAHVRELPALLDRLT
CCCCEEECCCCHHHHCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TQDSARQGG
HHCHHCCCC
>Mature Secondary Structure 
AITALTFDLDDTLWDNRPILERAEAEHYQWLSEAIAAAQTSPQTSFGDCYPLSAYQQHR
EEEEEEECCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
ADVARRHPLKRGDFTWIRERALFELVEAYGLPRLQARLWAAHAIAHFLDLRHDLTPYPDV
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH
VPLLDALRQRYRLAAITNGNADLKRLALAEHFPVMIAAGELHAPKPDPRAFLAALARLGA
HHHHHHHHHHHHHHEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHCC
TPSRALHVGDSWREDVLPAQRLGMQVAWVDAKDEGPRALPPGVHRLAHVRELPALLDRLT
CCCCEEECCCCHHHHCCCHHHHCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
TQDSARQGG
HHCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]