| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is yigA [C]
Identifier: 92115229
GI number: 92115229
Start: 3469200
End: 3469919
Strand: Direct
Name: yigA [C]
Synonym: Csal_3114
Alternate gene names: 92115229
Gene position: 3469200-3469919 (Clockwise)
Preceding gene: 92115228
Following gene: 92115230
Centisome position: 93.85
GC content: 66.67
Gene sequence:
>720_bases ATGTCCCAAGCCCAGGCGCCCGAACCGCGTACCACGCTCGATCCCGAGCGTGTCGCGCATTGGCTGGCCCGCCATCCCGA CTTCTTCGTCGGTCGAGAGGGACTGCTTCAACAGCTGAAGGTACCGCACCCCCAGACCCAAGGCGCTATCTCGCTGCTCG AGCGCCTGGTCCATGACTTGCGCGAACGCGCCGAGACCGCCGAATGGCGGCTCGAGCACTTGCTGGAAACGGCGCGGCAC AACGAAGCTCAGTATCAGCGCACAAGGTCGTTGATCCTGGCACTGCTGGAGTCGGAAAGCGTCGACGCGCTAGGCGAAGC ACTGTCGACGCAACTCAGTGAACGCTTCCGCACCCAAGCGGTCGCGCTGTGGCTGGAACCCGGCACCGACGGCGCCACGC TGCAACCGCCTCGCTTCGCGCTCGATACGCCGACCCGGGCCGCCTTCGATGAGCTGCTCGACGGTCACAACAGTCGCTGC ACCCGGCTCCCGCGGGACACCTGGCAACACTTGCTGCCCCACACCACGCCGCCCGACCAGCACGGCTCCTGCGCCGTGAC CCGGCTGACCGTGGGCGAACCGCTCGGCTACTTGCTGCTCGCCAGCCAGGAGAGCGAACACTTCCGCGCCACGCTCGATA CGCTATTCACCGATTACCTCGGGGAAATCGTCGGGCGACTCCTCGTGCGCCTGGATGCTGCGCATGCACGCCGCGGTTGA
Upstream 100 bases:
>100_bases TCGCCCGCGGGCAAGCGAAAAACAACACGCTAGGCGTCCCTGAAAAGCCGGCTGCGCGACGGCGCTTTTCAGGCCTTAGG CAAGATAGGAGAACCAACGC
Downstream 100 bases:
>100_bases ACGCTTCCTGCACAGCCTGTCGGGGCATGCCAGCCCCGCGACGCTGGATGCCTACCGGCGCGACCTGACCGCGCTGGCAC GCTTTCTCGAGGCGAGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MSQAQAPEPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETAEWRLEHLLETARH NEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEPGTDGATLQPPRFALDTPTRAAFDELLDGHNSRC TRLPRDTWQHLLPHTTPPDQHGSCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRLDAAHARRG
Sequences:
>Translated_239_residues MSQAQAPEPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETAEWRLEHLLETARH NEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEPGTDGATLQPPRFALDTPTRAAFDELLDGHNSRC TRLPRDTWQHLLPHTTPPDQHGSCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRLDAAHARRG >Mature_238_residues SQAQAPEPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDLRERAETAEWRLEHLLETARHN EAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQAVALWLEPGTDGATLQPPRFALDTPTRAAFDELLDGHNSRCT RLPRDTWQHLLPHTTPPDQHGSCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRLDAAHARRG
Specific function: Unknown
COG id: COG3159
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26973; Mature: 26842
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAQAPEPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDL CCCCCCCCCCCCCCHHHHHHHHHHCCCHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RERAETAEWRLEHLLETARHNEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VALWLEPGTDGATLQPPRFALDTPTRAAFDELLDGHNSRCTRLPRDTWQHLLPHTTPPDQ HEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCC HGSCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRLDAAHARRG CCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQAQAPEPRTTLDPERVAHWLARHPDFFVGREGLLQQLKVPHPQTQGAISLLERLVHDL CCCCCCCCCCCCCHHHHHHHHHHCCCHHHCHHHHHHHHCCCCCCCHHHHHHHHHHHHHH RERAETAEWRLEHLLETARHNEAQYQRTRSLILALLESESVDALGEALSTQLSERFRTQA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH VALWLEPGTDGATLQPPRFALDTPTRAAFDELLDGHNSRCTRLPRDTWQHLLPHTTPPDQ HEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCC HGSCAVTRLTVGEPLGYLLLASQESEHFRATLDTLFTDYLGEIVGRLLVRLDAAHARRG CCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA