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The map label for this gene is oppA [H]

Identifier: 92115114

GI number: 92115114

Start: 3336863

End: 3338512

Strand: Direct

Name: oppA [H]

Synonym: Csal_2999

Alternate gene names: 92115114

Gene position: 3336863-3338512 (Clockwise)

Preceding gene: 92115107

Following gene: 92115115

Centisome position: 90.27

GC content: 63.52

Gene sequence:

>1650_bases
ATGTCGCCACTCGCGGCATCCGACACAACAACAAGCGGAACAGACGACATGCTTCGACACTCGCACACTCGGCTTGCCAC
GACACTGCTATCCTCCCTGTCGCTGGCGTCACTGGCCCTGGCGGCGCCGGCCCAGGCCGACACGCTGAACATCGGCGTCA
TGGGGGAGCTGGCCTCGTTCGATACCTCGCAGGTTTCCGGCGGTGTCTGGGAATCGCAGATCCTCATGGACGTCTACGAA
GGCCTGCTCAAGGAAAACCCCGAGGGCGAGGTGATGCCCGGCATGGCCACCGACTGGGACATCTCCGAGGACGGCAGGAC
CTATACCTTTCATCTGCGCGAAGGCGCCAAATGGTCCGACGGCGCGCCGGTCACCGCCGAAGACTTCGTGTTCGGCTGGC
AGCATCTGCTCGACCCGGCCAGCGCTTCGAAATACGCCTACCTGCTCTATCCGATAAAGAATGCCGAAGCCGTCAACACG
GGCGACAGGCCGCTCGACGCACTCGGCGTCGAATCGCTGGACGATGGCAAGACGCTCAAGGTGACACTCGATGCCCCCAC
GCCCTACTTCCTGCAGCTGCTGACCCACTACACGGCCTACCCGGTCCCCAAGCACGCCGTCGAGAAATACGGCAAGCAGT
GGGTCAAGATGGACAACATCGTCACCAACGGCGCCTTCACGCCCGTCGAGTGGGTCTCGCAATCGCGCATCAGCGTCGAG
AAGAATCCCGACTACTACGAGGCCGACGAGGTCGAACTCGACGGCGTCAACTACTTCAACACCGAGGATCGCAATGCCGC
CATCTCGCGCTTCCGCGCCGGCGAGCTGGACATCGTCCGCGATTACCCCTCGAGCCGTTACCAGTGGCTCGAGGACAACC
TCCCCGAGGCCACCCACCTGAGCCCGATGCTGGGGTCCTACTACTACGTGCTCAATACCCGCGAGGGGCGCCCGACCGCC
GACAAGCGGGTCCGCGAGGCCCTGAACCTGGTCGCGCGCCGCAAGGTACTTTCCGAGCAGATCATGGCCGGCAGTTTCAA
GGATGCCTACTCGCTGGTCCCGCCGGGCACCAGCCATTACGACGTCCAGCGCATGGACGGTGTCGATGGCGACTACCAGA
AGCGCCTGGCCAGGGCCAAGCAACTGATCGAGGAGGCCGGCTACGGCCCCGACAACCCGCTGCACCTGCAACTGCGCTAC
AACACGTCCGATGAGCACAAGAAGATCGCCATCGCCCTGGCCGCGATGTGGAAGCCGCTGGGTGTCGACGTCGAGATGAC
CAATGCCGAGGCCACCGTGCACTACCAGACCATCCAGCAAGGCGACTTCGATATCGCCCGTGCCGGCTGGATCGCCGACT
ACAACGATGCCGAGAACTTCCTGACCTTGCTGCGCAGCGGCGTCGGCAACAACTACGGCGGCTACGCCAATCCCGAGTAC
GACGCGCTGCTCGCTCAAGCCGCCACCGTTCGGGACCTCGACGAGCGCGAGGCACTGCTCGAAAAAGCCGAGAACGTCGC
CCTCGACGACTACGCCCTCGTGCCGCTGCTCTATTACGTCACTCGCAATCTGGTCAATCCCGATATCAGCGGCTGGCAGG
ACAACGCCGAGGACGACCATCCATCGCGCTGGGTGACGTTCACCGAGTAA

Upstream 100 bases:

>100_bases
TCGACCTCACTCATGAGCTCCCTATCGAATATCTGAAACGGTATATACGAAATTTGCAATGGACAGCTTTCGTCGCACGG
AGAGATGGTAACGACACGTT

Downstream 100 bases:

>100_bases
CGAAACGCCTTTTCACGACATAAAGCGATGGGGGACGCCGGCAGCAGGCAAAAGCGAGGGCCATTCGTCACGGGCGACGA
ATGTCGCACCCGGAGAGGGG

Product: extracellular solute-binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MSPLAASDTTTSGTDDMLRHSHTRLATTLLSSLSLASLALAAPAQADTLNIGVMGELASFDTSQVSGGVWESQILMDVYE
GLLKENPEGEVMPGMATDWDISEDGRTYTFHLREGAKWSDGAPVTAEDFVFGWQHLLDPASASKYAYLLYPIKNAEAVNT
GDRPLDALGVESLDDGKTLKVTLDAPTPYFLQLLTHYTAYPVPKHAVEKYGKQWVKMDNIVTNGAFTPVEWVSQSRISVE
KNPDYYEADEVELDGVNYFNTEDRNAAISRFRAGELDIVRDYPSSRYQWLEDNLPEATHLSPMLGSYYYVLNTREGRPTA
DKRVREALNLVARRKVLSEQIMAGSFKDAYSLVPPGTSHYDVQRMDGVDGDYQKRLARAKQLIEEAGYGPDNPLHLQLRY
NTSDEHKKIAIALAAMWKPLGVDVEMTNAEATVHYQTIQQGDFDIARAGWIADYNDAENFLTLLRSGVGNNYGGYANPEY
DALLAQAATVRDLDEREALLEKAENVALDDYALVPLLYYVTRNLVNPDISGWQDNAEDDHPSRWVTFTE

Sequences:

>Translated_549_residues
MSPLAASDTTTSGTDDMLRHSHTRLATTLLSSLSLASLALAAPAQADTLNIGVMGELASFDTSQVSGGVWESQILMDVYE
GLLKENPEGEVMPGMATDWDISEDGRTYTFHLREGAKWSDGAPVTAEDFVFGWQHLLDPASASKYAYLLYPIKNAEAVNT
GDRPLDALGVESLDDGKTLKVTLDAPTPYFLQLLTHYTAYPVPKHAVEKYGKQWVKMDNIVTNGAFTPVEWVSQSRISVE
KNPDYYEADEVELDGVNYFNTEDRNAAISRFRAGELDIVRDYPSSRYQWLEDNLPEATHLSPMLGSYYYVLNTREGRPTA
DKRVREALNLVARRKVLSEQIMAGSFKDAYSLVPPGTSHYDVQRMDGVDGDYQKRLARAKQLIEEAGYGPDNPLHLQLRY
NTSDEHKKIAIALAAMWKPLGVDVEMTNAEATVHYQTIQQGDFDIARAGWIADYNDAENFLTLLRSGVGNNYGGYANPEY
DALLAQAATVRDLDEREALLEKAENVALDDYALVPLLYYVTRNLVNPDISGWQDNAEDDHPSRWVTFTE
>Mature_548_residues
SPLAASDTTTSGTDDMLRHSHTRLATTLLSSLSLASLALAAPAQADTLNIGVMGELASFDTSQVSGGVWESQILMDVYEG
LLKENPEGEVMPGMATDWDISEDGRTYTFHLREGAKWSDGAPVTAEDFVFGWQHLLDPASASKYAYLLYPIKNAEAVNTG
DRPLDALGVESLDDGKTLKVTLDAPTPYFLQLLTHYTAYPVPKHAVEKYGKQWVKMDNIVTNGAFTPVEWVSQSRISVEK
NPDYYEADEVELDGVNYFNTEDRNAAISRFRAGELDIVRDYPSSRYQWLEDNLPEATHLSPMLGSYYYVLNTREGRPTAD
KRVREALNLVARRKVLSEQIMAGSFKDAYSLVPPGTSHYDVQRMDGVDGDYQKRLARAKQLIEEAGYGPDNPLHLQLRYN
TSDEHKKIAIALAAMWKPLGVDVEMTNAEATVHYQTIQQGDFDIARAGWIADYNDAENFLTLLRSGVGNNYGGYANPEYD
ALLAQAATVRDLDEREALLEKAENVALDDYALVPLLYYVTRNLVNPDISGWQDNAEDDHPSRWVTFTE

Specific function: This protein is a component of the oligopeptide permease, a binding protein-dependent transport system, it binds peptides up to five amino acids long with high affinity [H]

COG id: COG4166

COG function: function code E; ABC-type oligopeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=519, Percent_Identity=40.0770712909441, Blast_Score=367, Evalue=1e-103,
Organism=Escherichia coli, GI87081878, Length=531, Percent_Identity=38.4180790960452, Blast_Score=362, Evalue=1e-101,
Organism=Escherichia coli, GI1789397, Length=464, Percent_Identity=38.5775862068966, Blast_Score=325, Evalue=6e-90,
Organism=Escherichia coli, GI1789966, Length=532, Percent_Identity=25.7518796992481, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1787052, Length=503, Percent_Identity=23.8568588469185, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1787762, Length=531, Percent_Identity=22.9755178907721, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1789887, Length=480, Percent_Identity=25.4166666666667, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1787551, Length=539, Percent_Identity=23.0055658627087, Blast_Score=89, Evalue=7e-19,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 61199; Mature: 61067

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS01040 SBP_BACTERIAL_5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLAASDTTTSGTDDMLRHSHTRLATTLLSSLSLASLALAAPAQADTLNIGVMGELASF
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCC
DTSQVSGGVWESQILMDVYEGLLKENPEGEVMPGMATDWDISEDGRTYTFHLREGAKWSD
CHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
GAPVTAEDFVFGWQHLLDPASASKYAYLLYPIKNAEAVNTGDRPLDALGVESLDDGKTLK
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEE
VTLDAPTPYFLQLLTHYTAYPVPKHAVEKYGKQWVKMDNIVTNGAFTPVEWVSQSRISVE
EEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCEEEC
KNPDYYEADEVELDGVNYFNTEDRNAAISRFRAGELDIVRDYPSSRYQWLEDNLPEATHL
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHC
SPMLGSYYYVLNTREGRPTADKRVREALNLVARRKVLSEQIMAGSFKDAYSLVPPGTSHY
CHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DVQRMDGVDGDYQKRLARAKQLIEEAGYGPDNPLHLQLRYNTSDEHKKIAIALAAMWKPL
CHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEHHHHHCCC
GVDVEMTNAEATVHYQTIQQGDFDIARAGWIADYNDAENFLTLLRSGVGNNYGGYANPEY
CCEEEECCCCEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
DALLAQAATVRDLDEREALLEKAENVALDDYALVPLLYYVTRNLVNPDISGWQDNAEDDH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSRWVTFTE
CCCCEEECC
>Mature Secondary Structure 
SPLAASDTTTSGTDDMLRHSHTRLATTLLSSLSLASLALAAPAQADTLNIGVMGELASF
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEHHHCC
DTSQVSGGVWESQILMDVYEGLLKENPEGEVMPGMATDWDISEDGRTYTFHLREGAKWSD
CHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCC
GAPVTAEDFVFGWQHLLDPASASKYAYLLYPIKNAEAVNTGDRPLDALGVESLDDGKTLK
CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCEEE
VTLDAPTPYFLQLLTHYTAYPVPKHAVEKYGKQWVKMDNIVTNGAFTPVEWVSQSRISVE
EEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHEEECCCCCHHHHHCCCCEEEC
KNPDYYEADEVELDGVNYFNTEDRNAAISRFRAGELDIVRDYPSSRYQWLEDNLPEATHL
CCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCHHHC
SPMLGSYYYVLNTREGRPTADKRVREALNLVARRKVLSEQIMAGSFKDAYSLVPPGTSHY
CHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DVQRMDGVDGDYQKRLARAKQLIEEAGYGPDNPLHLQLRYNTSDEHKKIAIALAAMWKPL
CHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHEEHHHHHCCC
GVDVEMTNAEATVHYQTIQQGDFDIARAGWIADYNDAENFLTLLRSGVGNNYGGYANPEY
CCEEEECCCCEEEEEEECCCCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHH
DALLAQAATVRDLDEREALLEKAENVALDDYALVPLLYYVTRNLVNPDISGWQDNAEDDH
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PSRWVTFTE
CCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2187863; 9097039; 9278503; 2015910; 9298646; 9600841 [H]