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The map label for this gene is dinF [H]

Identifier: 92115053

GI number: 92115053

Start: 3274800

End: 3276155

Strand: Direct

Name: dinF [H]

Synonym: Csal_2937

Alternate gene names: 92115053

Gene position: 3274800-3276155 (Clockwise)

Preceding gene: 92115052

Following gene: 92115054

Centisome position: 88.59

GC content: 67.77

Gene sequence:

>1356_bases
GTGTCTTCATCACGCCCCGCGACACGCATCTGGCCGCTCGCCTGGCCGATCATCCTTTCCAACATCACCGTCCCGCTGCT
GGGACTGGTGGACACCGCGGTGGTCGGCCACCTGCCGGACTCCCGCTACATGGCCGCCGTGACCCTGGGGGCCACCCTGT
TCAGCTTTCTGTACTGGGGCTTCGGGTTTCTGCGCATGGGCACCACCGGCCTGACCTCCCAGGCCGTGGGCCGCGAGGAC
GACAGCGACATCCGCAACCTGCTGGGTCAGGCGCTGTTGCTGGCACTCGGCATCGGCGTGCTGCTGATCCTGCTCGCCGA
ACCGCTGATCGACTTCGGTCTCTACCTGCTCGACGGCAGCCCGGCGGCCATGGCCCTGGCCGACGATTACGCCCATATTC
GCATTCTGTCGGCCCCGGCGGTGATGGCGAATTACGCGATTCTCGGCTGGTTTCTGGGCCAGCAGAACTCGCGGGTCACG
CTGGCGATCATGGTGTTGACCAACAGCGTCAACATCGTCCTCGACCTGGTGTTCGTGGTCGGGCTGGGCATGACCAGCGA
CGGCGTGGCCTGGGCCACCGTCATCGCCGACTATACCGCCCTGGGCGCGGGACTGTGGCTCGTGGCACGCCAGCTGGGAC
GCCTGCAGGGACGCTTCCTGCGTCGGCGCCTGCTGCGATTCGCCGCCTACTCCGAGCTGTTCCAGGTCAATCGGCACCTG
TTCGTGCGCACGCTGGGGCTGCTGTTCGCCATGGCCTTCTTCACCGCTCAGGGCGCCGACCAGGGCGACACGGTGCTCGC
CGCCAACGCGGTACTGATGCAGTTCATCATGATCACCTCCTACGCGCTGGACGGCTTCGCCCATGCCGCCGAAGCCTTGA
CCGGACGCGCCGTGGGGCGTCGCGACTGGCCGCTTTTCTCGAGCGCGGTGCGCGCGGCCGCGCGTTTCTCGCTGGTCACC
GCCGGGGTCGCCATGGCCGCGTTCCTGTTCGGCGGCCATGCCCTGATCGCCCTGCTCACCGACCTGCCCGACGTGCGAGC
CTCGGCGGCCGACTACCTGCCCTGGATGGTCGTCATGCCGGCCATCGCGGTATGGAGCTATCTGCTCGACGGCGTCTTCA
TCGGCGCCACCGCAACCCGTGAAATGCGCGACACCATCCTGCTGGCACTCGCCGTCTACCTGCCGGTGTGGTGGCTCGCG
CAACCGCTGGGCAACCACGGCCTGTGGCTCGCCTTCACGGCCTTCACCCTGGTGCGCTCGGCAAGTCTCGCCGCCGTCTA
CCTGCACTATCGGCGCACGCGCTGGACAAGCGCCGCGACGCCCGCCTGCGACCAAGGGATACAGGACCAAGGTTGA

Upstream 100 bases:

>100_bases
GCACGCCACGCCGCCGCGGGCGACGTGGCGCGTGTCGGCCCCATTTTTCCTTCTCACGGGTGTGTGTCACGCGTGAGCGC
ACACCCAACGACGGAATCCC

Downstream 100 bases:

>100_bases
GTGATCGGCGCGACTCCCGAGCGACTATCGTTATCAGCATGACAACGACCTCCTGGAGAGGCTTTCATGCTGAAGCTGCT
GTCTCGCCCCGCGGTACGCC

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 451; Mature: 450

Protein sequence:

>451_residues
MSSSRPATRIWPLAWPIILSNITVPLLGLVDTAVVGHLPDSRYMAAVTLGATLFSFLYWGFGFLRMGTTGLTSQAVGRED
DSDIRNLLGQALLLALGIGVLLILLAEPLIDFGLYLLDGSPAAMALADDYAHIRILSAPAVMANYAILGWFLGQQNSRVT
LAIMVLTNSVNIVLDLVFVVGLGMTSDGVAWATVIADYTALGAGLWLVARQLGRLQGRFLRRRLLRFAAYSELFQVNRHL
FVRTLGLLFAMAFFTAQGADQGDTVLAANAVLMQFIMITSYALDGFAHAAEALTGRAVGRRDWPLFSSAVRAAARFSLVT
AGVAMAAFLFGGHALIALLTDLPDVRASAADYLPWMVVMPAIAVWSYLLDGVFIGATATREMRDTILLALAVYLPVWWLA
QPLGNHGLWLAFTAFTLVRSASLAAVYLHYRRTRWTSAATPACDQGIQDQG

Sequences:

>Translated_451_residues
MSSSRPATRIWPLAWPIILSNITVPLLGLVDTAVVGHLPDSRYMAAVTLGATLFSFLYWGFGFLRMGTTGLTSQAVGRED
DSDIRNLLGQALLLALGIGVLLILLAEPLIDFGLYLLDGSPAAMALADDYAHIRILSAPAVMANYAILGWFLGQQNSRVT
LAIMVLTNSVNIVLDLVFVVGLGMTSDGVAWATVIADYTALGAGLWLVARQLGRLQGRFLRRRLLRFAAYSELFQVNRHL
FVRTLGLLFAMAFFTAQGADQGDTVLAANAVLMQFIMITSYALDGFAHAAEALTGRAVGRRDWPLFSSAVRAAARFSLVT
AGVAMAAFLFGGHALIALLTDLPDVRASAADYLPWMVVMPAIAVWSYLLDGVFIGATATREMRDTILLALAVYLPVWWLA
QPLGNHGLWLAFTAFTLVRSASLAAVYLHYRRTRWTSAATPACDQGIQDQG
>Mature_450_residues
SSSRPATRIWPLAWPIILSNITVPLLGLVDTAVVGHLPDSRYMAAVTLGATLFSFLYWGFGFLRMGTTGLTSQAVGREDD
SDIRNLLGQALLLALGIGVLLILLAEPLIDFGLYLLDGSPAAMALADDYAHIRILSAPAVMANYAILGWFLGQQNSRVTL
AIMVLTNSVNIVLDLVFVVGLGMTSDGVAWATVIADYTALGAGLWLVARQLGRLQGRFLRRRLLRFAAYSELFQVNRHLF
VRTLGLLFAMAFFTAQGADQGDTVLAANAVLMQFIMITSYALDGFAHAAEALTGRAVGRRDWPLFSSAVRAAARFSLVTA
GVAMAAFLFGGHALIALLTDLPDVRASAADYLPWMVVMPAIAVWSYLLDGVFIGATATREMRDTILLALAVYLPVWWLAQ
PLGNHGLWLAFTAFTLVRSASLAAVYLHYRRTRWTSAATPACDQGIQDQG

Specific function: Unknown

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family [H]

Homologues:

Organism=Escherichia coli, GI1790477, Length=442, Percent_Identity=44.7963800904977, Blast_Score=272, Evalue=3e-74,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 48788; Mature: 48656

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSRPATRIWPLAWPIILSNITVPLLGLVDTAVVGHLPDSRYMAAVTLGATLFSFLYWG
CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FGFLRMGTTGLTSQAVGREDDSDIRNLLGQALLLALGIGVLLILLAEPLIDFGLYLLDGS
HHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
PAAMALADDYAHIRILSAPAVMANYAILGWFLGQQNSRVTLAIMVLTNSVNIVLDLVFVV
CCEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHH
GLGMTSDGVAWATVIADYTALGAGLWLVARQLGRLQGRFLRRRLLRFAAYSELFQVNRHL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVRTLGLLFAMAFFTAQGADQGDTVLAANAVLMQFIMITSYALDGFAHAAEALTGRAVGR
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RDWPLFSSAVRAAARFSLVTAGVAMAAFLFGGHALIALLTDLPDVRASAADYLPWMVVMP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIAVWSYLLDGVFIGATATREMRDTILLALAVYLPVWWLAQPLGNHGLWLAFTAFTLVRS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ASLAAVYLHYRRTRWTSAATPACDQGIQDQG
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure 
SSSRPATRIWPLAWPIILSNITVPLLGLVDTAVVGHLPDSRYMAAVTLGATLFSFLYWG
CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FGFLRMGTTGLTSQAVGREDDSDIRNLLGQALLLALGIGVLLILLAEPLIDFGLYLLDGS
HHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCC
PAAMALADDYAHIRILSAPAVMANYAILGWFLGQQNSRVTLAIMVLTNSVNIVLDLVFVV
CCEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCHHHHHHHHHHH
GLGMTSDGVAWATVIADYTALGAGLWLVARQLGRLQGRFLRRRLLRFAAYSELFQVNRHL
HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVRTLGLLFAMAFFTAQGADQGDTVLAANAVLMQFIMITSYALDGFAHAAEALTGRAVGR
HHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
RDWPLFSSAVRAAARFSLVTAGVAMAAFLFGGHALIALLTDLPDVRASAADYLPWMVVMP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AIAVWSYLLDGVFIGATATREMRDTILLALAVYLPVWWLAQPLGNHGLWLAFTAFTLVRS
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
ASLAAVYLHYRRTRWTSAATPACDQGIQDQG
HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8265357; 9278503 [H]