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The map label for this gene is atoE [H]

Identifier: 92115054

GI number: 92115054

Start: 3276222

End: 3277532

Strand: Direct

Name: atoE [H]

Synonym: Csal_2938

Alternate gene names: 92115054

Gene position: 3276222-3277532 (Clockwise)

Preceding gene: 92115053

Following gene: 92115055

Centisome position: 88.63

GC content: 65.22

Gene sequence:

>1311_bases
ATGCTGAAGCTGCTGTCTCGCCCCGCGGTACGCCTGGTCGAACGCTACCTGCCCGATCCTTACATCTTCGTGCTGATCCT
GACCCTGGTGGCGGCCATCGCGGCCATGCTGGTCGAGCGGCAGTCGCCACTGGCGATCATGCGCTACTGGGGAGATGGCT
TCTGGGGACTGCTGTCCTTCTCGATGCAGATGCTGCTGGTGCTGGTCACTGGCTTCATGCTGGCCAGCAGCCCACCCGTC
AAGCGCCTGCTCGACAGGATCGCCCGGCTCGCCAAGAGCCCGGCCGGCGCCATCGTGCTGGTGTCGCTGGTCTCGCTGGC
CGCCAGCTGGATCAACTGGGGCTTCGGCCTGGTCATCGGCGCCCTGTTCGCCAAGGCCCTCGCACGACAGGTGCGTGTCG
ACTACCGCCTGTTGATCGCCAGCGCCTATTCGGGCTTCGTGGTATGGCACGGCGGCCTGGCCGGCTCGATTCCCTTGACC
ATCGCCACCGAAGGGCATTTCACGGCGGACCAGATCGGTGTCATTCCCACCTCCGAGACCATCTTCGCGTTCTTCAACCT
GGCCATCGTGCTGGCGATGTTCGTGGCCGTGCCGCTGGTCAACCGGTTCATGCTTCCCGACGAGCGTGACAGCGTCTACA
TCGACCCCGCACAACTCGACGACGCCCCGCGCGACCTCGGTCCCGCCACGCGTCCGGCGGAACGCCTGGAAAAGAGCTCC
TGGCTGTCATGGCTGGTCGGCATTCCCGGCTTGCTGTTCCTGCTCGACCATTTCGTGTTCCGTGACGGCGGCCTGAACCT
CAACGTGGTCAATTTCCTGTTCCTGTCCCTGGCCATCGTGCTGCATCGCACGCCCCGCAGCCTGCTGGACAGCCTCCACG
AGGCCATCAAGGGTGGTACCGGTATCGTCATCCAGTTTCCCTTCTACGCCGGCATCATGGCGATCATCATGCAGTCCGGG
CTGGCACAGACGCTTTCCGAGGGGTTCGTGGCGATCTCCACCGCCCAGACGCTGCCTTTCTGGTCATTCATCAGTGCCGG
CATCGTCAACCTGTTCGTGCCTTCGGGCGGCGGGCAATGGGCCGTCCAGGCCCCGGTCATGCTGCCCGCCGCCGCCTCCC
TGGGCGCGGATATCCCCCGCGTCGCCATGGCGGTCGCCTGGGGCGATGCCTGGACCAACCTGCTGCAGCCGTTCTGGGCG
CTTCCCATGCTCGCCATCGCGGGGCTCAAGGCCAAGGACATCATGGGCTTCTGCCTGATCCAGCTGGTGGTGACGGGCGT
CATCATCGCGCTCGGGCTGACCTTTCTGTGA

Upstream 100 bases:

>100_bases
CGCCTGCGACCAAGGGATACAGGACCAAGGTTGAGTGATCGGCGCGACTCCCGAGCGACTATCGTTATCAGCATGACAAC
GACCTCCTGGAGAGGCTTTC

Downstream 100 bases:

>100_bases
ACGGTTCCCGCCCGCCCGCGGGGAAGCAGAGGGGAGCGACAAGACAGGGCAAAACATGATACATCTTGCGCCTCTATCCA
TTCCCCGGCCTCAGCAGGAT

Product: short chain fatty acid transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLKLLSRPAVRLVERYLPDPYIFVLILTLVAAIAAMLVERQSPLAIMRYWGDGFWGLLSFSMQMLLVLVTGFMLASSPPV
KRLLDRIARLAKSPAGAIVLVSLVSLAASWINWGFGLVIGALFAKALARQVRVDYRLLIASAYSGFVVWHGGLAGSIPLT
IATEGHFTADQIGVIPTSETIFAFFNLAIVLAMFVAVPLVNRFMLPDERDSVYIDPAQLDDAPRDLGPATRPAERLEKSS
WLSWLVGIPGLLFLLDHFVFRDGGLNLNVVNFLFLSLAIVLHRTPRSLLDSLHEAIKGGTGIVIQFPFYAGIMAIIMQSG
LAQTLSEGFVAISTAQTLPFWSFISAGIVNLFVPSGGGQWAVQAPVMLPAAASLGADIPRVAMAVAWGDAWTNLLQPFWA
LPMLAIAGLKAKDIMGFCLIQLVVTGVIIALGLTFL

Sequences:

>Translated_436_residues
MLKLLSRPAVRLVERYLPDPYIFVLILTLVAAIAAMLVERQSPLAIMRYWGDGFWGLLSFSMQMLLVLVTGFMLASSPPV
KRLLDRIARLAKSPAGAIVLVSLVSLAASWINWGFGLVIGALFAKALARQVRVDYRLLIASAYSGFVVWHGGLAGSIPLT
IATEGHFTADQIGVIPTSETIFAFFNLAIVLAMFVAVPLVNRFMLPDERDSVYIDPAQLDDAPRDLGPATRPAERLEKSS
WLSWLVGIPGLLFLLDHFVFRDGGLNLNVVNFLFLSLAIVLHRTPRSLLDSLHEAIKGGTGIVIQFPFYAGIMAIIMQSG
LAQTLSEGFVAISTAQTLPFWSFISAGIVNLFVPSGGGQWAVQAPVMLPAAASLGADIPRVAMAVAWGDAWTNLLQPFWA
LPMLAIAGLKAKDIMGFCLIQLVVTGVIIALGLTFL
>Mature_436_residues
MLKLLSRPAVRLVERYLPDPYIFVLILTLVAAIAAMLVERQSPLAIMRYWGDGFWGLLSFSMQMLLVLVTGFMLASSPPV
KRLLDRIARLAKSPAGAIVLVSLVSLAASWINWGFGLVIGALFAKALARQVRVDYRLLIASAYSGFVVWHGGLAGSIPLT
IATEGHFTADQIGVIPTSETIFAFFNLAIVLAMFVAVPLVNRFMLPDERDSVYIDPAQLDDAPRDLGPATRPAERLEKSS
WLSWLVGIPGLLFLLDHFVFRDGGLNLNVVNFLFLSLAIVLHRTPRSLLDSLHEAIKGGTGIVIQFPFYAGIMAIIMQSG
LAQTLSEGFVAISTAQTLPFWSFISAGIVNLFVPSGGGQWAVQAPVMLPAAASLGADIPRVAMAVAWGDAWTNLLQPFWA
LPMLAIAGLKAKDIMGFCLIQLVVTGVIIALGLTFL

Specific function: Responsible for the intake of short-chain fatty acids [H]

COG id: COG2031

COG function: function code I; Short chain fatty acids transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788553, Length=438, Percent_Identity=44.2922374429224, Blast_Score=385, Evalue=1e-108,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006161
- InterPro:   IPR006160 [H]

Pfam domain/function: PF02667 SCFA_trans [H]

EC number: NA

Molecular weight: Translated: 47172; Mature: 47172

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLLSRPAVRLVERYLPDPYIFVLILTLVAAIAAMLVERQSPLAIMRYWGDGFWGLLSF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH
SMQMLLVLVTGFMLASSPPVKRLLDRIARLAKSPAGAIVLVSLVSLAASWINWGFGLVIG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARQVRVDYRLLIASAYSGFVVWHGGLAGSIPLTIATEGHFTADQIGVIPTSET
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHCCCCCCHHH
IFAFFNLAIVLAMFVAVPLVNRFMLPDERDSVYIDPAQLDDAPRDLGPATRPAERLEKSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCHHCCCCCCHHHHHHHHH
WLSWLVGIPGLLFLLDHFVFRDGGLNLNVVNFLFLSLAIVLHRTPRSLLDSLHEAIKGGT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GIVIQFPFYAGIMAIIMQSGLAQTLSEGFVAISTAQTLPFWSFISAGIVNLFVPSGGGQW
CEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEECCCCCE
AVQAPVMLPAAASLGADIPRVAMAVAWGDAWTNLLQPFWALPMLAIAGLKAKDIMGFCLI
EEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QLVVTGVIIALGLTFL
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLKLLSRPAVRLVERYLPDPYIFVLILTLVAAIAAMLVERQSPLAIMRYWGDGFWGLLSF
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHH
SMQMLLVLVTGFMLASSPPVKRLLDRIARLAKSPAGAIVLVSLVSLAASWINWGFGLVIG
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALFAKALARQVRVDYRLLIASAYSGFVVWHGGLAGSIPLTIATEGHFTADQIGVIPTSET
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCCHHHCCCCCCHHH
IFAFFNLAIVLAMFVAVPLVNRFMLPDERDSVYIDPAQLDDAPRDLGPATRPAERLEKSS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCCHHCCCCCCHHHHHHHHH
WLSWLVGIPGLLFLLDHFVFRDGGLNLNVVNFLFLSLAIVLHRTPRSLLDSLHEAIKGGT
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
GIVIQFPFYAGIMAIIMQSGLAQTLSEGFVAISTAQTLPFWSFISAGIVNLFVPSGGGQW
CEEEECHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHEEEEECCCCCE
AVQAPVMLPAAASLGADIPRVAMAVAWGDAWTNLLQPFWALPMLAIAGLKAKDIMGFCLI
EEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
QLVVTGVIIALGLTFL
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]