| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yqhT [H]
Identifier: 92115001
GI number: 92115001
Start: 3214751
End: 3216028
Strand: Direct
Name: yqhT [H]
Synonym: Csal_2884
Alternate gene names: 92115001
Gene position: 3214751-3216028 (Clockwise)
Preceding gene: 92115000
Following gene: 92115002
Centisome position: 86.96
GC content: 64.63
Gene sequence:
>1278_bases ATGACCCGCTTGTCATCCACGCTGCCTTCCCTGCTGGAAGGCACCGATATCCTGGCGCCGACGCACGAACCCGCCGAGTG CGAGCCCACTCAGGCCGAGAGCCGCCAGATTCTGCTCGACCGCCTGGCCCGCACCCGGGCCGAACTGAAGAAACGCGATA TCGTCGCCGCCGTGCTGTTCGACCCGACCCATGTGCGCTACGCGACCGGCGCCCGCAACATGCAGGTCTACTCGGCGCGC AACCCGGCGCGTTACGCCTTCGTGCCGGCCGAGGGCCCGGTGGTGATGTTCGAGTTCTCCGGCTGCAGTCACTTGACCGA AGGGCTGCCGGGCATCGACGAGACACGCCCGGCGACGGCGATCTCCTATTATTTCTGTGAAGACAACCTTCAGCAGACCA CCGAGGCGTGGGCGGACGAGATCGACGAACTGGTACGCCGATGCGGCGGACAAAAAGGCGACAAGGTGGCCATCGAAAGC GCCACCTCGCATGCCGCCTTCGCGCTGGTCGAACGCGGCTGGCAGATCTGCGATGCCCAGATCCCGCTGGAGCGGGCGCG GGCGATCAAGGTCCCCAACGAGATCAAGATGGTGCGCAGCTCGCTGCGCGCGGTCGAGGACGGGGTCCGCAAGCTGGAAG CGGCGATTCGCCCCGGCGCCACGGAGAACGAGGGCTGGTCGCAGCTGCACCAGCACATCATCGCCACCGATGCGGACTAC GTCGAAACCCGGCTGATGAATTCCGGGCCGCGCACCAACCCCTGGTTCCAGGAGTGCTCCAATAGAGCGATGCAGGCCGG CGAGCTGGTCGCGCTGGATACCGACGTGGTCGGCCGTTATGGTTACTACGCCGATTTCTCGCGAACCTTCCTGTGCGGCG ACGGCCAGGCGTCGTCCACCCAGCGCGAGTTGTATCGCATGGCCTTCGATCAGGTACGCACCAACATGGCCCTGATCGCG CCGGGCATGTCGTTCAAGGAATACGCCGAGAAGGCCTGGCAGATTCCCCAACCCTACAAGGCGCGCCGCTATTTCGCGCT GGCGCATGGGGTCGGCATGACCGGCGAGTATCCGTATATCGTTCACCGCGAGGACATCGACGACAAGGGCTACGACGGCA TCATGCAACCCGGCATGACGCTTTGCGTGGAAAGCTATATCGGCCACGAGGCCGGCGGCGAAGGCGTCAAGCTCGAGGAG CAGCTTTACATCCGCGACGATGGCCAGGTCGAATTGCTTTCCGACTATCCACTCGATACGCGGCTGCTGGCCGACTGA
Upstream 100 bases:
>100_bases CGAGGCGGAAAAGCGCCGTGAAGTTCGCGCCGACGGGCTGCTCGACTGATCGAAATGCCTGGAACGGGCTGATTCAATTT CCATGACGGGACCGACGACC
Downstream 100 bases:
>100_bases GGGCCAGTCGTCTCATCCCGACAGAAGCGAACGCCATGACCCAGACATCGATCCCGCATATCGATCTCACGCCACTTCTC GAAGGCGCCGGCAGCGACGA
Product: peptidase M24
Products: N-terminal amino acid including proline [C]
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MTRLSSTLPSLLEGTDILAPTHEPAECEPTQAESRQILLDRLARTRAELKKRDIVAAVLFDPTHVRYATGARNMQVYSAR NPARYAFVPAEGPVVMFEFSGCSHLTEGLPGIDETRPATAISYYFCEDNLQQTTEAWADEIDELVRRCGGQKGDKVAIES ATSHAAFALVERGWQICDAQIPLERARAIKVPNEIKMVRSSLRAVEDGVRKLEAAIRPGATENEGWSQLHQHIIATDADY VETRLMNSGPRTNPWFQECSNRAMQAGELVALDTDVVGRYGYYADFSRTFLCGDGQASSTQRELYRMAFDQVRTNMALIA PGMSFKEYAEKAWQIPQPYKARRYFALAHGVGMTGEYPYIVHREDIDDKGYDGIMQPGMTLCVESYIGHEAGGEGVKLEE QLYIRDDGQVELLSDYPLDTRLLAD
Sequences:
>Translated_425_residues MTRLSSTLPSLLEGTDILAPTHEPAECEPTQAESRQILLDRLARTRAELKKRDIVAAVLFDPTHVRYATGARNMQVYSAR NPARYAFVPAEGPVVMFEFSGCSHLTEGLPGIDETRPATAISYYFCEDNLQQTTEAWADEIDELVRRCGGQKGDKVAIES ATSHAAFALVERGWQICDAQIPLERARAIKVPNEIKMVRSSLRAVEDGVRKLEAAIRPGATENEGWSQLHQHIIATDADY VETRLMNSGPRTNPWFQECSNRAMQAGELVALDTDVVGRYGYYADFSRTFLCGDGQASSTQRELYRMAFDQVRTNMALIA PGMSFKEYAEKAWQIPQPYKARRYFALAHGVGMTGEYPYIVHREDIDDKGYDGIMQPGMTLCVESYIGHEAGGEGVKLEE QLYIRDDGQVELLSDYPLDTRLLAD >Mature_424_residues TRLSSTLPSLLEGTDILAPTHEPAECEPTQAESRQILLDRLARTRAELKKRDIVAAVLFDPTHVRYATGARNMQVYSARN PARYAFVPAEGPVVMFEFSGCSHLTEGLPGIDETRPATAISYYFCEDNLQQTTEAWADEIDELVRRCGGQKGDKVAIESA TSHAAFALVERGWQICDAQIPLERARAIKVPNEIKMVRSSLRAVEDGVRKLEAAIRPGATENEGWSQLHQHIIATDADYV ETRLMNSGPRTNPWFQECSNRAMQAGELVALDTDVVGRYGYYADFSRTFLCGDGQASSTQRELYRMAFDQVRTNMALIAP GMSFKEYAEKAWQIPQPYKARRYFALAHGVGMTGEYPYIVHREDIDDKGYDGIMQPGMTLCVESYIGHEAGGEGVKLEEQ LYIRDDGQVELLSDYPLDTRLLAD
Specific function: Unknown
COG id: COG0006
COG function: function code E; Xaa-Pro aminopeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M24B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000587 - InterPro: IPR001714 - InterPro: IPR000994 - InterPro: IPR001131 [H]
Pfam domain/function: PF01321 Creatinase_N; PF00557 Peptidase_M24 [H]
EC number: 3.4.11.9 [C]
Molecular weight: Translated: 47524; Mature: 47393
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLSSTLPSLLEGTDILAPTHEPAECEPTQAESRQILLDRLARTRAELKKRDIVAAVLF CCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE DPTHVRYATGARNMQVYSARNPARYAFVPAEGPVVMFEFSGCSHLTEGLPGIDETRPATA CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCHHHHHCCCCCCCCCCCCE ISYYFCEDNLQQTTEAWADEIDELVRRCGGQKGDKVAIESATSHAAFALVERGWQICDAQ EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCHHEECCC IPLERARAIKVPNEIKMVRSSLRAVEDGVRKLEAAIRPGATENEGWSQLHQHIIATDADY CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH VETRLMNSGPRTNPWFQECSNRAMQAGELVALDTDVVGRYGYYADFSRTFLCGDGQASST HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHCCCCEECCCCEEEECCCCCCHH QRELYRMAFDQVRTNMALIAPGMSFKEYAEKAWQIPQPYKARRYFALAHGVGMTGEYPYI HHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCHHHHHEEHHECCCCCCCCCCEE VHREDIDDKGYDGIMQPGMTLCVESYIGHEAGGEGVKLEEQLYIRDDGQVELLSDYPLDT EECCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCC RLLAD EECCC >Mature Secondary Structure TRLSSTLPSLLEGTDILAPTHEPAECEPTQAESRQILLDRLARTRAELKKRDIVAAVLF CCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEE DPTHVRYATGARNMQVYSARNPARYAFVPAEGPVVMFEFSGCSHLTEGLPGIDETRPATA CCCCEEEECCCCCEEEEECCCCCEEEEEECCCCEEEEEECCCHHHHHCCCCCCCCCCCCE ISYYFCEDNLQQTTEAWADEIDELVRRCGGQKGDKVAIESATSHAAFALVERGWQICDAQ EEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCHHEECCC IPLERARAIKVPNEIKMVRSSLRAVEDGVRKLEAAIRPGATENEGWSQLHQHIIATDADY CCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHH VETRLMNSGPRTNPWFQECSNRAMQAGELVALDTDVVGRYGYYADFSRTFLCGDGQASST HHHHHHCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHCCCCEECCCCEEEECCCCCCHH QRELYRMAFDQVRTNMALIAPGMSFKEYAEKAWQIPQPYKARRYFALAHGVGMTGEYPYI HHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHCCCCCHHHHHEEHHECCCCCCCCCCEE VHREDIDDKGYDGIMQPGMTLCVESYIGHEAGGEGVKLEEQLYIRDDGQVELLSDYPLDT EECCCCCCCCCCCHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEECCCCCC RLLAD EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Co2+ [C]
Kcat value (1/min): 8100 [C]
Specific activity: 3.45
Km value (mM): 3 {(4-nitro)Phe-Pro-HN-CH2-CH2-NH-o-aminobenzoyl}} 0.22 {(4-nitro)Phe-Pro-Pro-HN-CH2-CH2-NH-o-aminobenzoyl}} [C]
Substrates: N-terminal amino acid including proline [C]
Specific reaction: Release of any N-terminal amino acid including proline that mislinked with proline even from a dipeptide or tripeptide [C]
General reaction: carboxylic acid amide hydrolysis [C]
Inhibitor: thiazolidide acid; -2-hydroxy -3-amino acidpyrrolidide acid; Pro-methyl ester acid; Pro-Phe-methyl ester acid; 2-hydroxy -3-aminoacyl-Pro-OH dipeptides [C]
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]