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The map label for this gene is yfgC [C]

Identifier: 92114978

GI number: 92114978

Start: 3193095

End: 3193910

Strand: Direct

Name: yfgC [C]

Synonym: Csal_2861

Alternate gene names: 92114978

Gene position: 3193095-3193910 (Clockwise)

Preceding gene: 92114975

Following gene: 92114984

Centisome position: 86.38

GC content: 65.2

Gene sequence:

>816_bases
ATGCAAAGGACGTTGCCTTCCCGTCTACGTACGCCGCTTGCCATCGGCCTCATCGGTGCCACGCTGGCCGCGTGCAGCAC
CTCGCCGCTGGGGCGCAACCAGTTGGCGTTCTTCTCCGACGAAGAACTCCAGCAGATGGGCCAGCAAAGCTTCGCGCAAT
ATCAGCAGGAACTGCCGGAAGTCGGCGGCGCCACCTACGACTACGTGCAATGCGTCGCCGACGCCATCACCGACGAAGTC
CCCGCCGATGCGGGCATCGCGACCTGGGAAGTCAAGGTCTTCAAGGACGATTCGGCCAACGCCTTCGCCCTGCCGGGAGG
CTATATCGGGGTCAACAGCGGGCTGCTCGACGTCACCGAGAACCAGGATCAACTGGCCGCCGTCATCGGCCACGAAGTGG
CCCACGTATTATCCGACCACGCCAACGAGCGCGTATCGACGCAGGCGGCCACGCAAACCGGATTATCGATCCTGCAATCC
GCCGCCGGCCTGCAGGGTGCCACCGGCGAACAGCTCATGGGGCTGCTCGGCGCGGGCGCCCAGTACGGCGTGATTCTTCC
CTTCTCGCGCAAGCAGGAATCGGAAGCCGACAAGCTCGGCCTCGACCTGATGGCCGAGGCCGGCTTCAATCCCAATGCCA
GTATCGAGCTGTGGCAGAACATGGCCGCGCAGAGTCAGGGCCAGCCGCCGGAATGGTTGTCCACCCACCCCAGCAACGAA
GCCCGCATGCAAGGGTTGCGCGAGCGCATGAACGAGGCCATGCCGCTCTACGAACAGGCCCGGGCCAACGGCCAGCGGCC
CGACTGCCGACGCTGA

Upstream 100 bases:

>100_bases
GGTCCGGGGACATGCACCGCGAGGGAGGTTGACCCAACGCGGCATCGGGGTATCTTGGAGCCGTTTGGTCATCGGGTCCA
GAACCCATCAGGAGACTCTC

Downstream 100 bases:

>100_bases
AAAGCGGCCCGGCATCGCGCTGCCGGGCCCGGTCGCATCACAGTTCGCGGCGCAGCGTTTCGCGTACCGGCGCGGTATCC
GGACGCACCTGGCGCCACAG

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MQRTLPSRLRTPLAIGLIGATLAACSTSPLGRNQLAFFSDEELQQMGQQSFAQYQQELPEVGGATYDYVQCVADAITDEV
PADAGIATWEVKVFKDDSANAFALPGGYIGVNSGLLDVTENQDQLAAVIGHEVAHVLSDHANERVSTQAATQTGLSILQS
AAGLQGATGEQLMGLLGAGAQYGVILPFSRKQESEADKLGLDLMAEAGFNPNASIELWQNMAAQSQGQPPEWLSTHPSNE
ARMQGLRERMNEAMPLYEQARANGQRPDCRR

Sequences:

>Translated_271_residues
MQRTLPSRLRTPLAIGLIGATLAACSTSPLGRNQLAFFSDEELQQMGQQSFAQYQQELPEVGGATYDYVQCVADAITDEV
PADAGIATWEVKVFKDDSANAFALPGGYIGVNSGLLDVTENQDQLAAVIGHEVAHVLSDHANERVSTQAATQTGLSILQS
AAGLQGATGEQLMGLLGAGAQYGVILPFSRKQESEADKLGLDLMAEAGFNPNASIELWQNMAAQSQGQPPEWLSTHPSNE
ARMQGLRERMNEAMPLYEQARANGQRPDCRR
>Mature_271_residues
MQRTLPSRLRTPLAIGLIGATLAACSTSPLGRNQLAFFSDEELQQMGQQSFAQYQQELPEVGGATYDYVQCVADAITDEV
PADAGIATWEVKVFKDDSANAFALPGGYIGVNSGLLDVTENQDQLAAVIGHEVAHVLSDHANERVSTQAATQTGLSILQS
AAGLQGATGEQLMGLLGAGAQYGVILPFSRKQESEADKLGLDLMAEAGFNPNASIELWQNMAAQSQGQPPEWLSTHPSNE
ARMQGLRERMNEAMPLYEQARANGQRPDCRR

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TPR repeat [H]

Homologues:

Organism=Homo sapiens, GI21686999, Length=251, Percent_Identity=29.4820717131474, Blast_Score=97, Evalue=1e-20,
Organism=Escherichia coli, GI1788840, Length=176, Percent_Identity=33.5227272727273, Blast_Score=89, Evalue=4e-19,
Organism=Escherichia coli, GI87082185, Length=239, Percent_Identity=27.1966527196653, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081800, Length=159, Percent_Identity=26.4150943396226, Blast_Score=72, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6322940, Length=180, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011716
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48; PF07720 TPR_3 [H]

EC number: NA

Molecular weight: Translated: 29091; Mature: 29091

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRTLPSRLRTPLAIGLIGATLAACSTSPLGRNQLAFFSDEELQQMGQQSFAQYQQELPE
CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
VGGATYDYVQCVADAITDEVPADAGIATWEVKVFKDDSANAFALPGGYIGVNSGLLDVTE
HCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEECCCCEEECCCCEEEECC
NQDQLAAVIGHEVAHVLSDHANERVSTQAATQTGLSILQSAAGLQGATGEQLMGLLGAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
QYGVILPFSRKQESEADKLGLDLMAEAGFNPNASIELWQNMAAQSQGQPPEWLSTHPSNE
CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCHH
ARMQGLRERMNEAMPLYEQARANGQRPDCRR
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQRTLPSRLRTPLAIGLIGATLAACSTSPLGRNQLAFFSDEELQQMGQQSFAQYQQELPE
CCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHH
VGGATYDYVQCVADAITDEVPADAGIATWEVKVFKDDSANAFALPGGYIGVNSGLLDVTE
HCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCEEECCCCEEECCCCEEEECC
NQDQLAAVIGHEVAHVLSDHANERVSTQAATQTGLSILQSAAGLQGATGEQLMGLLGAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCC
QYGVILPFSRKQESEADKLGLDLMAEAGFNPNASIELWQNMAAQSQGQPPEWLSTHPSNE
CCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHCCCCCHH
ARMQGLRERMNEAMPLYEQARANGQRPDCRR
HHHHHHHHHHHHHCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]