| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 1057 [H]
Identifier: 92114973
GI number: 92114973
Start: 3187047
End: 3187703
Strand: Direct
Name: 1057 [H]
Synonym: Csal_2856
Alternate gene names: 92114973
Gene position: 3187047-3187703 (Clockwise)
Preceding gene: 92114972
Following gene: 92114974
Centisome position: 86.21
GC content: 65.6
Gene sequence:
>657_bases GTGGCGGAGCTTAGCACCGAAGACGAACAGCTTGAGACGCTCAAGCGCTGGTGGAAGGAATACGGCAAGTCGATCATCGC CGGGGTGGTACTCGCCGGAGCGGGCGTCTTCGCCTGGAATGCCTGGCAGGACTATCAGACCTCCCAGGCGGAAGCCGCCT CGCAGCGCTATCAGCAGCTCACGCTGCTGATGCAGCAGGACACCCTGAGCGACGCGCAGCGCGAACAGGCCACCAACATG ATCGATGCCCTGGTCAACGAGCACGGCGGCACGCTCTATGCCGATTTCGCCGAGTTGATACGCGCGCGCCTGGCCATCCA GGCCAACGAGCTGGAGAGCGCCCGCGACACGCTGCAGGCCTTTGCCGCCAACAGCGACGACGGCTATCTCACCGGGCTGG CACGTCTCAACCTGGCCCGCGTGCAGATCGCCATGGATGACGCGCAGGGCGCACTGTCGACCCTCGAGAACGACGTGCCC GCCACGCTCAAGGCACAGGCCGCCGATATTCGCGGCGATGCCTACGTGGCACTCGAGCAGCCCGATCAGGCACGCCAGGC CTACCAGGACGCTCTCGCCCGCGCCGAGGATCAGGACCAGCCCCTGTTCGGCGTACGGCTCAAGCTCGACAATCTCGGTG TAGAGGACGCCAGTTGA
Upstream 100 bases:
>100_bases GGCTCGGGAGGCGCTGGCGGCCCGTCTCCAAGCGCTTCTCGCCGAAGACTGAGGACGCCCCGGGGCGTATCGCACGAACA GCCATTGAAGGAGACCGCCC
Downstream 100 bases:
>100_bases TGAAACCGACCCACTTTCTGTTACCGGCCGCGCTCACCTTGTCCGCCTTGCTGGCGGGGTGTTCAGGCAATGTCGAGCCG CAATATCCGCCCAAGGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAELSTEDEQLETLKRWWKEYGKSIIAGVVLAGAGVFAWNAWQDYQTSQAEAASQRYQQLTLLMQQDTLSDAQREQATNM IDALVNEHGGTLYADFAELIRARLAIQANELESARDTLQAFAANSDDGYLTGLARLNLARVQIAMDDAQGALSTLENDVP ATLKAQAADIRGDAYVALEQPDQARQAYQDALARAEDQDQPLFGVRLKLDNLGVEDAS
Sequences:
>Translated_218_residues MAELSTEDEQLETLKRWWKEYGKSIIAGVVLAGAGVFAWNAWQDYQTSQAEAASQRYQQLTLLMQQDTLSDAQREQATNM IDALVNEHGGTLYADFAELIRARLAIQANELESARDTLQAFAANSDDGYLTGLARLNLARVQIAMDDAQGALSTLENDVP ATLKAQAADIRGDAYVALEQPDQARQAYQDALARAEDQDQPLFGVRLKLDNLGVEDAS >Mature_217_residues AELSTEDEQLETLKRWWKEYGKSIIAGVVLAGAGVFAWNAWQDYQTSQAEAASQRYQQLTLLMQQDTLSDAQREQATNMI DALVNEHGGTLYADFAELIRARLAIQANELESARDTLQAFAANSDDGYLTGLARLNLARVQIAMDDAQGALSTLENDVPA TLKAQAADIRGDAYVALEQPDQARQAYQDALARAEDQDQPLFGVRLKLDNLGVEDAS
Specific function: Unknown
COG id: COG2976
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0070 family [H]
Homologues:
Organism=Escherichia coli, GI1788860, Length=214, Percent_Identity=28.9719626168224, Blast_Score=78, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018704 - InterPro: IPR011990 [H]
Pfam domain/function: PF09976 DUF2133 [H]
EC number: NA
Molecular weight: Translated: 23954; Mature: 23822
Theoretical pI: Translated: 4.02; Mature: 4.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELSTEDEQLETLKRWWKEYGKSIIAGVVLAGAGVFAWNAWQDYQTSQAEAASQRYQQL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHH TLLMQQDTLSDAQREQATNMIDALVNEHGGTLYADFAELIRARLAIQANELESARDTLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAANSDDGYLTGLARLNLARVQIAMDDAQGALSTLENDVPATLKAQAADIRGDAYVALEQ HHCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECC PDQARQAYQDALARAEDQDQPLFGVRLKLDNLGVEDAS CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC >Mature Secondary Structure AELSTEDEQLETLKRWWKEYGKSIIAGVVLAGAGVFAWNAWQDYQTSQAEAASQRYQQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCHHHHHHHHHHHHHHHHHHH TLLMQQDTLSDAQREQATNMIDALVNEHGGTLYADFAELIRARLAIQANELESARDTLQA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAANSDDGYLTGLARLNLARVQIAMDDAQGALSTLENDVPATLKAQAADIRGDAYVALEQ HHCCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEEEEECC PDQARQAYQDALARAEDQDQPLFGVRLKLDNLGVEDAS CHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA