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The map label for this gene is rodZ [H]

Identifier: 92114970

GI number: 92114970

Start: 3183492

End: 3184547

Strand: Direct

Name: rodZ [H]

Synonym: Csal_2853

Alternate gene names: 92114970

Gene position: 3183492-3184547 (Clockwise)

Preceding gene: 92114969

Following gene: 92114971

Centisome position: 86.12

GC content: 66.57

Gene sequence:

>1056_bases
ATGAGCGACACTCACGAACAACACGATCCCCACGCTCCCACGACCGGACACGAACCGCCGGGCACCCAACTCCGGCGCGA
GCGTGAACGACAGGGATTGTCCCTCGAGGAAGTCGCCGAGCAGCTCAACCTGCGGCCCGCCGTGGTCAAGGGCCTGGAGG
AAGACCAGTACGATCAGGTCCCGATCGCCACTTATCGGCGCGGTTACCTGCGCGCCTACGCCAAGTTGCTGGGCGTCGAC
GACAAGCGCGTGGCGCAGGCCTACGACGCGCTCCACGGCCGCGACGATCTCGATCGTACGGTGACCCCAGCCTATCGATC
GCAGCCCCCGTCACGACTCGGTGCCTGGGTCTTCAAGCTGGTCACGCTGCTGATCGTGCTCGGCCTCATCGGCCTGACGC
TGCTGTGGTGGCAAAGCCGTGAAGGCAATGAGTTCTTCGGGCTGGGAGATGGCGCTTCCGTGTCGATGGAAACCACCCAG
GACGGTGACGTCACCCAGGAAGATGGCGGCGATGCCTCGGTCACCGAAAGCGCCACCGGCGACGCTGGCGCCTCGCCGTC
GGCCACCGCCTCCGCAGACGAGCAGGGGAGTCTGCCACCGCTGCCCGAGAACGACAGCGAACTGGGGCTGGTCGACGACG
ACACCACGGACGCCGAAGCAGAAGCACCGGCGGCCGACGCCTCCCAGGAGGCAGGCACGGCCGGCACGGATGGCGCATCA
CCGGAGGCGGCCGAGCTGGCCACCACGGCGAATGCCGGCGTTCCGGAAGACACCGACACCGCGGCGGACGATAGCGCCGC
GGAAACCGCCGACCCCAACCGCTTGACGCTGACCTTCAACGAGCAGTCATGGACCGAGATCTATGATGCCGACAACCAAC
GCCTGCTGGCGGGATTGCAGGATGCCGGCACCCAGGCCCAGGTCGAGGGCACGCCACCGTTTCGCCTCACCGTGGGCAAT
GCCACCGGCGTCGAAATCAGCTATCGAGACGACAACGTCGACTTGAGCGAGCATACCGGCAGCAACAACGTCGCCCGCTT
CACCTTGGGAGAGTGA

Upstream 100 bases:

>100_bases
GCGCAAGAGGCGACCAGGAAGCCGCGGCCTTTTATCATCGGCAGCTCGACGGTTCCTGAGGCATGATCCGACCACCCGAA
TTCGAGAAGGATGCTCTGGC

Downstream 100 bases:

>100_bases
TACGCCCATGCATATGCAATCTCCGATCCAACGGCGCAAGTCGCGCCAGATTCATGTCGGGCACGTCCCCGTCGGTGGGG
ACGCCCCCATCGCCGTGCAA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MSDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQVPIATYRRGYLRAYAKLLGVD
DKRVAQAYDALHGRDDLDRTVTPAYRSQPPSRLGAWVFKLVTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQ
DGDVTQEDGGDASVTESATGDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGAS
PEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGLQDAGTQAQVEGTPPFRLTVGN
ATGVEISYRDDNVDLSEHTGSNNVARFTLGE

Sequences:

>Translated_351_residues
MSDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQVPIATYRRGYLRAYAKLLGVD
DKRVAQAYDALHGRDDLDRTVTPAYRSQPPSRLGAWVFKLVTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQ
DGDVTQEDGGDASVTESATGDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGAS
PEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGLQDAGTQAQVEGTPPFRLTVGN
ATGVEISYRDDNVDLSEHTGSNNVARFTLGE
>Mature_350_residues
SDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQVPIATYRRGYLRAYAKLLGVDD
KRVAQAYDALHGRDDLDRTVTPAYRSQPPSRLGAWVFKLVTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQD
GDVTQEDGGDASVTESATGDAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGASP
EAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGLQDAGTQAQVEGTPPFRLTVGNA
TGVEISYRDDNVDLSEHTGSNNVARFTLGE

Specific function: Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis [H]

COG id: COG1426

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein. Note=Forms helical filaments along the long axis of the cell (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788864, Length=359, Percent_Identity=29.2479108635098, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 37339; Mature: 37208

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQV
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCC
PIATYRRGYLRAYAKLLGVDDKRVAQAYDALHGRDDLDRTVTPAYRSQPPSRLGAWVFKL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCHHHCCCHHHHHHHHHHH
VTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQDGDVTQEDGGDASVTESATG
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
DAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGLQ
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCHHHHHHHH
DAGTQAQVEGTPPFRLTVGNATGVEISYRDDNVDLSEHTGSNNVARFTLGE
HCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHCCCCCCEEEEECCC
>Mature Secondary Structure 
SDTHEQHDPHAPTTGHEPPGTQLRRERERQGLSLEEVAEQLNLRPAVVKGLEEDQYDQV
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHCCCCCCCCCC
PIATYRRGYLRAYAKLLGVDDKRVAQAYDALHGRDDLDRTVTPAYRSQPPSRLGAWVFKL
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHCCCCHHHCCCHHHHHHHHHHH
VTLLIVLGLIGLTLLWWQSREGNEFFGLGDGASVSMETTQDGDVTQEDGGDASVTESATG
HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
DAGASPSATASADEQGSLPPLPENDSELGLVDDDTTDAEAEAPAADASQEAGTAGTDGAS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCC
PEAAELATTANAGVPEDTDTAADDSAAETADPNRLTLTFNEQSWTEIYDADNQRLLAGLQ
CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHCCCCHHHHHHHH
DAGTQAQVEGTPPFRLTVGNATGVEISYRDDNVDLSEHTGSNNVARFTLGE
HCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCHHHCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA