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The map label for this gene is 92114969

Identifier: 92114969

GI number: 92114969

Start: 3182641

End: 3183450

Strand: Direct

Name: 92114969

Synonym: Csal_2852

Alternate gene names: NA

Gene position: 3182641-3183450 (Clockwise)

Preceding gene: 92114968

Following gene: 92114970

Centisome position: 86.1

GC content: 63.7

Gene sequence:

>810_bases
ATGGGACACTTCCAGACGACGAAATCCATCGCCTCGCACCGTTTGACGCCATTGTTTCGAGAGGGCCCCATGACGCGTCG
CCATCGTCCACCTTCGATCCGCTCGTTGAGTGCCGCGATGTCGCTCGTCTGGCTATTGGGCGGCTGCGCCGTGCAGGTCG
AAAGTGCATCGCCCTACGCGCCGCCGGATACCGGCGAAGCGGTCTCCGCCTATACCGACCTGGGGCTGGCCTATCTCCGG
CGCGACAACCTCTCTCGCGCGCGACGCGCGCTCGAACACGCCCTCGAACTTGGGCCTCAGGACCCGCAGGCCCTGGAAGG
CATGGCCCTCCTCCATCAGCGTCAGAAAGAACCCGCACTCGCCGAGGAGTTCTTCGAACGTGCGCTGGAAGCCGACACTG
ATTATACTCGCGCGCGCAATAACTACGCCGCATTGCTGTACGATGAGGGCAAGCTCGACGCCGCCTGCCGGCAGTTGCGG
ATAGCGGCGCAAGACATGACATACGACAATCGCGCCCAGTTGCTCGCCAACCTGGGGCGCTGCCGATTCGAGCAGGGCGA
TCTCGAGGCCGCACGGCGTCCGCTGGAACAAGCGCTGGCCTACGACTCGCGAGACACGCAAAGCCTGCTCCTGTTGGCGA
GACTCGACCATACGCAGGGTCACGATGAACGTGCCTGGGAACGCCTGCAGCGTTTCTTTACCCTGGCCGATGCGACTCCG
GACAGTCTCGAACTGGCGAGCGAAATCGCTCGCGCAAGAGGCGACCAGGAAGCCGCGGCCTTTTATCATCGGCAGCTCGA
CGGTTCCTGA

Upstream 100 bases:

>100_bases
GCGTGAAGGATCGCACCAAGCGGCACGAGCGTTACATCCAGTCCATCCAGCTCGACGCTGATTGAGCCTTGCCTTGACTT
CGCCAGGGTGCGGCGCTTTG

Downstream 100 bases:

>100_bases
GGCATGATCCGACCACCCGAATTCGAGAAGGATGCTCTGGCATGAGCGACACTCACGAACAACACGATCCCCACGCTCCC
ACGACCGGACACGAACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV Pilus Biogenesis Protein PilF; Type 4 Fimbrial Biogenesis Protein; Type IV Pili Biogenesis Protein PilF; Fimbrial Biogenesis Protein; Pilus Assembly Protein; Type 4 Fimbrial Biogenesis Protein PilF; Tfp Pilus Assembly Protein PilF; Fimbrial Biogenesis And Twitching Motility Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MGHFQTTKSIASHRLTPLFREGPMTRRHRPPSIRSLSAAMSLVWLLGGCAVQVESASPYAPPDTGEAVSAYTDLGLAYLR
RDNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPALAEEFFERALEADTDYTRARNNYAALLYDEGKLDAACRQLR
IAAQDMTYDNRAQLLANLGRCRFEQGDLEAARRPLEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATP
DSLELASEIARARGDQEAAAFYHRQLDGS

Sequences:

>Translated_269_residues
MGHFQTTKSIASHRLTPLFREGPMTRRHRPPSIRSLSAAMSLVWLLGGCAVQVESASPYAPPDTGEAVSAYTDLGLAYLR
RDNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPALAEEFFERALEADTDYTRARNNYAALLYDEGKLDAACRQLR
IAAQDMTYDNRAQLLANLGRCRFEQGDLEAARRPLEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATP
DSLELASEIARARGDQEAAAFYHRQLDGS
>Mature_268_residues
GHFQTTKSIASHRLTPLFREGPMTRRHRPPSIRSLSAAMSLVWLLGGCAVQVESASPYAPPDTGEAVSAYTDLGLAYLRR
DNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPALAEEFFERALEADTDYTRARNNYAALLYDEGKLDAACRQLRI
AAQDMTYDNRAQLLANLGRCRFEQGDLEAARRPLEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATPD
SLELASEIARARGDQEAAAFYHRQLDGS

Specific function: Unknown

COG id: COG3063

COG function: function code NU; Tfp pilus assembly protein PilF

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30207; Mature: 30076

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGHFQTTKSIASHRLTPLFREGPMTRRHRPPSIRSLSAAMSLVWLLGGCAVQVESASPYA
CCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC
PPDTGEAVSAYTDLGLAYLRRDNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPAL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
AEEFFERALEADTDYTRARNNYAALLYDEGKLDAACRQLRIAAQDMTYDNRAQLLANLGR
HHHHHHHHHHCCCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
CRFEQGDLEAARRPLEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATP
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DSLELASEIARARGDQEAAAFYHRQLDGS
HHHHHHHHHHHHCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
GHFQTTKSIASHRLTPLFREGPMTRRHRPPSIRSLSAAMSLVWLLGGCAVQVESASPYA
CCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCC
PPDTGEAVSAYTDLGLAYLRRDNLSRARRALEHALELGPQDPQALEGMALLHQRQKEPAL
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHH
AEEFFERALEADTDYTRARNNYAALLYDEGKLDAACRQLRIAAQDMTYDNRAQLLANLGR
HHHHHHHHHHCCCHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
CRFEQGDLEAARRPLEQALAYDSRDTQSLLLLARLDHTQGHDERAWERLQRFFTLADATP
HCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
DSLELASEIARARGDQEAAAFYHRQLDGS
HHHHHHHHHHHHCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA