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The map label for this gene is secF [H]

Identifier: 92114953

GI number: 92114953

Start: 3165753

End: 3166661

Strand: Direct

Name: secF [H]

Synonym: Csal_2836

Alternate gene names: 92114953

Gene position: 3165753-3166661 (Clockwise)

Preceding gene: 92114952

Following gene: 92114955

Centisome position: 85.64

GC content: 62.16

Gene sequence:

>909_bases
ATGCGACAGTTAGATTTCATGGGCAAACGCCGCATAGCCTTCATCGTCTCCGTGCTGATCACGGTGATTGCCGTCGGCGC
GCTGGCGTTCAAGGGGCTCAATCTGGGCCTGGATTTCACCGGGGGCACCCTGGTGGAGGTCCGCTATCAGCAGGCACCGG
AGCTGGACGAGTTGCGTGGTCAGCTGGAAAGCGCCGGATTCGAGGACGTTCAGGTCCAGACCTTCGGCGCCACCAACGAC
ATTCTGGTGCGTCTCCAGCAGACCTTCGACAACGAGGTCGGCCAGCAGGTCGTCGATATCCTGAACACCGATGCCAACCA
GGTGCAGTTGGTCCGCGCCGAGTTCGTCGGCGCCCAGGTCGGCGACCAGCTCCGCGATCAGAGCGGGCTGGGCATGCTGC
TGGCGCTCGCGGTGGTGATGGTATACGTCGCCTTCCGTTTCCAGTACAAGTTCGCCTTCGGCGCCCTGGTCGCACTGGGG
CACGACGTGGTGATCGTGCTGGGGATCTTCGCGCTGCTGGGGCTCGACTTCGACCTCACGGTACTCGCTGCCGTCCTGGC
GGTGATCGGTTACTCGCTCAACGACACCATCATCGTCTACGACCGCATCCGCGAGAACATCCGTCGGTCGCAGATCGATG
ACATGCCCCAGATCTTCAACGAGGCGATCAACCAGACGCTGGCGCGTACCATGGCCACCTCGGGGACGACATTGCTGGTC
TTGCTGGCCTTGTTCTTCCTCGGCGGCGACATGATCCACAACTTCTCGATCGCCTTGATCCTGGGCATCGTGGCGGGGAC
CTTCTCGTCGGTCTACGTGTCCGCTGCCTTGCTGCTCGTGGTCAAGCTGGAGCGCAAGGACTTGATCCCGGCCCAGAAGG
AAGACGACGAGGAAGAGGAACTGCCCTAG

Upstream 100 bases:

>100_bases
GACGTCGATGTTCACCGCCATCATGGTGTCGCGCGCCATGATCAACCTCACCATCGGCGGGCGCCCGCTGAAGAAAATCT
GGATCTGAGGAGAGCGAGCG

Downstream 100 bases:

>100_bases
GCCACTACGGACATGCGGCGGTCTTGCACCGCCGTTTCAGGGCAGACGACGCCTCCCTCCGGGGAGGCGTCTTGCGTTGG
TCAGCTGGTCAGCTCTCGCG

Product: protein translocase subunit secF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRQLDFMGKRRIAFIVSVLITVIAVGALAFKGLNLGLDFTGGTLVEVRYQQAPELDELRGQLESAGFEDVQVQTFGATND
ILVRLQQTFDNEVGQQVVDILNTDANQVQLVRAEFVGAQVGDQLRDQSGLGMLLALAVVMVYVAFRFQYKFAFGALVALG
HDVVIVLGIFALLGLDFDLTVLAAVLAVIGYSLNDTIIVYDRIRENIRRSQIDDMPQIFNEAINQTLARTMATSGTTLLV
LLALFFLGGDMIHNFSIALILGIVAGTFSSVYVSAALLLVVKLERKDLIPAQKEDDEEEELP

Sequences:

>Translated_302_residues
MRQLDFMGKRRIAFIVSVLITVIAVGALAFKGLNLGLDFTGGTLVEVRYQQAPELDELRGQLESAGFEDVQVQTFGATND
ILVRLQQTFDNEVGQQVVDILNTDANQVQLVRAEFVGAQVGDQLRDQSGLGMLLALAVVMVYVAFRFQYKFAFGALVALG
HDVVIVLGIFALLGLDFDLTVLAAVLAVIGYSLNDTIIVYDRIRENIRRSQIDDMPQIFNEAINQTLARTMATSGTTLLV
LLALFFLGGDMIHNFSIALILGIVAGTFSSVYVSAALLLVVKLERKDLIPAQKEDDEEEELP
>Mature_302_residues
MRQLDFMGKRRIAFIVSVLITVIAVGALAFKGLNLGLDFTGGTLVEVRYQQAPELDELRGQLESAGFEDVQVQTFGATND
ILVRLQQTFDNEVGQQVVDILNTDANQVQLVRAEFVGAQVGDQLRDQSGLGMLLALAVVMVYVAFRFQYKFAFGALVALG
HDVVIVLGIFALLGLDFDLTVLAAVLAVIGYSLNDTIIVYDRIRENIRRSQIDDMPQIFNEAINQTLARTMATSGTTLLV
LLALFFLGGDMIHNFSIALILGIVAGTFSSVYVSAALLLVVKLERKDLIPAQKEDDEEEELP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=303, Percent_Identity=41.9141914191419, Blast_Score=250, Evalue=7e-68,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 33088; Mature: 33088

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQLDFMGKRRIAFIVSVLITVIAVGALAFKGLNLGLDFTGGTLVEVRYQQAPELDELRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCHHHHHH
QLESAGFEDVQVQTFGATNDILVRLQQTFDNEVGQQVVDILNTDANQVQLVRAEFVGAQV
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GDQLRDQSGLGMLLALAVVMVYVAFRFQYKFAFGALVALGHDVVIVLGIFALLGLDFDLT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
VLAAVLAVIGYSLNDTIIVYDRIRENIRRSQIDDMPQIFNEAINQTLARTMATSGTTLLV
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLALFFLGGDMIHNFSIALILGIVAGTFSSVYVSAALLLVVKLERKDLIPAQKEDDEEEE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC
LP
CC
>Mature Secondary Structure
MRQLDFMGKRRIAFIVSVLITVIAVGALAFKGLNLGLDFTGGTLVEVRYQQAPELDELRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCEEEEEECCCCCCHHHHHH
QLESAGFEDVQVQTFGATNDILVRLQQTFDNEVGQQVVDILNTDANQVQLVRAEFVGAQV
HHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
GDQLRDQSGLGMLLALAVVMVYVAFRFQYKFAFGALVALGHDVVIVLGIFALLGLDFDLT
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHH
VLAAVLAVIGYSLNDTIIVYDRIRENIRRSQIDDMPQIFNEAINQTLARTMATSGTTLLV
HHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLALFFLGGDMIHNFSIALILGIVAGTFSSVYVSAALLLVVKLERKDLIPAQKEDDEEEE
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCC
LP
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]