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The map label for this gene is aidB [H]

Identifier: 92114944

GI number: 92114944

Start: 3154438

End: 3156090

Strand: Direct

Name: aidB [H]

Synonym: Csal_2827

Alternate gene names: 92114944

Gene position: 3154438-3156090 (Clockwise)

Preceding gene: 92114941

Following gene: 92114947

Centisome position: 85.33

GC content: 69.09

Gene sequence:

>1653_bases
ATGCCGGATCACGCACCTTGTACGCACCTCGCCACCCACGACGTCAGCAATCAACCGCCCGTCAGCGGCGATCGCGATCT
GTTGCGCGAGGATCTCCCGCTCGCCGAGGGCCTGGCGCGCGAGGCACCGGCCTGGGTCGCCGAGCGTCTCGCCCCGCTCG
CCTGCAACGCCGGCAGGGAGAGCTGGCAAGTGCTTGCCGACGAGGCCAACCACTACCCACCGGAACTGCGCACGTTCGAT
CGTCATGGCCGGCGTCTCGACGAAGTGCACTACACGCCGGCCTACCATCACCTGATGCACCTGGCATGCGGCGGCGGCTG
GCACGGCGTGGCCTGGGAACATGAAGGCGCCGGCGGCCATCAGGCACACATCGCCGCGCTCTATCTGCTGACCCAGGTCG
AACCCGGCTTCTGCTGCCCGATCACCATGACCCACGCCGCCTACCCGGTGCTGCGCCAGGATTCGGCCGTGCTCGCGACA
TGGGGGCCGCGCCTGCTGGCGCACGACTACGACCCGCGCGCCCTGCCCATCGGCGACAAGCGTGCCGCGACCTTCGGCAT
GGCGATGACCGAAAAGCAAGGCGGCAGCGACGTCCGCAGCAACACGACGCGCGCCACCCCGAACGCCGACGGCAGCGTGC
GACTGACCGGCCACAAGTGGTTCTGCAGCGCCCCGATGTCCGACGCCTTTCTCACGCTGGCCCGGGACGAGGCCGGCATC
GGCTGCTTTCTGGTGCCGCGCTTTCGCCCCGATGGCGAGCGCAACGGCATCCTCCTGCAACGTCTCAAGGACAAGTGCGG
CAATCGTGCCAACGCCTCGGCGGAAATCGAGTATGCCGATGCCTGGGCCCAGCCCATCGGCGCGCCGGGGCGCGGCATCG
CCACGATCCTCGACATGGTGCAGCAGACCCGACTCGATGCCGCGACCGCACCCGCCGGCATGATGCGTCAGGCCCTGCGC
GAGGCCTGGCACCATGCGCAAGGTCGCGAGGCCTTCGGCAAGCGCCTCGCCGACCAGCCGCTGATGCAGCGCGTGATCGC
CGATCTGGCGCTTGAAACCGAAGCGAGCCTGGCCTTGTGCCTGCGCACCGCCCGCGCCTTCGACGGCGCCCCCCATGACG
ACCACGAACGCGCCCTGGCGCGGCTGCTTCCGGCACTCGCCAAGTTCTGGCACAACAAGCGCGGGCCCGCATTCATGGCC
GAGGCCATGGAGTGTCTCGGGGGCATCGGTTACGTCGAGGAGGCACCGCTCGCACGGCTGTACCGTGAAGCGCCGGTGAA
TTCCATCTGGGAAGGGTCGGGCAATGTCATGTGCCTCGATGTCATGCGCGTTCTGGGACGACATCCGGAATGCATCGTCG
CCCTGCGCCAGGAGCTGGCGCTGGCGCGCGGCGCTCACCATGACTTCGACCGCGCGCTGGGCATGCTCGAGCGACGTCTC
GACGCCACGCCGGAAACGCTCGAGGCACAGGCACGCTGGCTGACCCAGCGTCTGGCGCAGTGCCTGCAAGCGGCCTTGCT
GTTGCGTCACGCCCCCAACGCCGTCGGCGAGACATTCTGTACGGCGCGTCTCGGCGACGAGGCCACGCCCTTGTTCGGCG
TCCTGCCGGCGCAAGCACCGCTGGCGGCCATTCTCGCCCGCATCAACCCATGA

Upstream 100 bases:

>100_bases
GCGTCACGTCACGCCGGAAGGGGCGTATTGACCGTTCGGCACCGGGTGACCATGCTCCAGACATAGGGGTTTGCGCCCAC
TGGCCACTGGAGTCGCCCTC

Downstream 100 bases:

>100_bases
CGATGCGCAGCGCCAGGCCCAGCAGCAAGACGCCCGTGATGCGATTGATCCAGTGGGCGCGTGCCTGCAGCCAGGGCAAC
ACCGCAGAATGCGAGAGCGC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 549

Protein sequence:

>550_residues
MPDHAPCTHLATHDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANHYPPELRTFD
RHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEGAGGHQAHIAALYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLAT
WGPRLLAHDYDPRALPIGDKRAATFGMAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGI
GCFLVPRFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLDAATAPAGMMRQALR
EAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARAFDGAPHDDHERALARLLPALAKFWHNKRGPAFMA
EAMECLGGIGYVEEAPLARLYREAPVNSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRL
DATPETLEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAPLAAILARINP

Sequences:

>Translated_550_residues
MPDHAPCTHLATHDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANHYPPELRTFD
RHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEGAGGHQAHIAALYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLAT
WGPRLLAHDYDPRALPIGDKRAATFGMAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGI
GCFLVPRFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLDAATAPAGMMRQALR
EAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARAFDGAPHDDHERALARLLPALAKFWHNKRGPAFMA
EAMECLGGIGYVEEAPLARLYREAPVNSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRL
DATPETLEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAPLAAILARINP
>Mature_549_residues
PDHAPCTHLATHDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRESWQVLADEANHYPPELRTFDR
HGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEGAGGHQAHIAALYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLATW
GPRLLAHDYDPRALPIGDKRAATFGMAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGIG
CFLVPRFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMVQQTRLDAATAPAGMMRQALRE
AWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALCLRTARAFDGAPHDDHERALARLLPALAKFWHNKRGPAFMAE
AMECLGGIGYVEEAPLARLYREAPVNSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRLD
ATPETLEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAPLAAILARINP

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=264, Percent_Identity=30.6818181818182, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4501859, Length=253, Percent_Identity=25.6916996047431, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI21361497, Length=314, Percent_Identity=25.1592356687898, Blast_Score=86, Evalue=8e-17,
Organism=Homo sapiens, GI226958414, Length=270, Percent_Identity=25.5555555555556, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI226958412, Length=270, Percent_Identity=25.5555555555556, Blast_Score=84, Evalue=4e-16,
Organism=Homo sapiens, GI4557235, Length=411, Percent_Identity=24.330900243309, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI76496475, Length=411, Percent_Identity=24.330900243309, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI7656849, Length=265, Percent_Identity=26.4150943396226, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI4501857, Length=263, Percent_Identity=27.3764258555133, Blast_Score=74, Evalue=4e-13,
Organism=Homo sapiens, GI4557231, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI187960098, Length=267, Percent_Identity=25.0936329588015, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87082384, Length=518, Percent_Identity=46.5250965250965, Blast_Score=410, Evalue=1e-115,
Organism=Escherichia coli, GI87081958, Length=263, Percent_Identity=25.4752851711027, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1786223, Length=262, Percent_Identity=24.8091603053435, Blast_Score=64, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI86563383, Length=486, Percent_Identity=30.0411522633745, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI86563381, Length=486, Percent_Identity=30.0411522633745, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI17538396, Length=346, Percent_Identity=27.1676300578035, Blast_Score=102, Evalue=8e-22,
Organism=Caenorhabditis elegans, GI17508101, Length=268, Percent_Identity=25, Blast_Score=98, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=352, Percent_Identity=22.7272727272727, Blast_Score=90, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=383, Percent_Identity=25.065274151436, Blast_Score=85, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17534899, Length=268, Percent_Identity=25, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17569725, Length=271, Percent_Identity=23.6162361623616, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17570075, Length=266, Percent_Identity=24.812030075188, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985184, Length=399, Percent_Identity=23.3082706766917, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI21356377, Length=264, Percent_Identity=28.7878787878788, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24646207, Length=275, Percent_Identity=28.7272727272727, Blast_Score=89, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281363737, Length=388, Percent_Identity=23.1958762886598, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355753, Length=262, Percent_Identity=26.3358778625954, Blast_Score=83, Evalue=6e-16,
Organism=Drosophila melanogaster, GI24666513, Length=349, Percent_Identity=20.3438395415473, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24660351, Length=267, Percent_Identity=25.0936329588015, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 60161; Mature: 60030

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDHAPCTHLATHDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRE
CCCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCHH
SWQVLADEANHYPPELRTFDRHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEGAGGH
HHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCC
QAHIAALYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLATWGPRLLAHDYDPRALPIGDK
HHHHHHHHHHHHCCCCCCCCEEHHHHHCHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCC
RAATFGMAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGI
HHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHEEEECCCCCC
GCFLVPRFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMV
EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHH
QQTRLDAATAPAGMMRQALREAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALC
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LRTARAFDGAPHDDHERALARLLPALAKFWHNKRGPAFMAEAMECLGGIGYVEEAPLARL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
YREAPVNSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRL
HHHCCCCHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DATPETLEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHEECCCHHH
LAAILARINP
HHHHHHHCCC
>Mature Secondary Structure 
PDHAPCTHLATHDVSNQPPVSGDRDLLREDLPLAEGLAREAPAWVAERLAPLACNAGRE
CCCCCCCHHHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHCCCHH
SWQVLADEANHYPPELRTFDRHGRRLDEVHYTPAYHHLMHLACGGGWHGVAWEHEGAGGH
HHHHHHHHHCCCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHCCCCCCCCCEECCCCCCC
QAHIAALYLLTQVEPGFCCPITMTHAAYPVLRQDSAVLATWGPRLLAHDYDPRALPIGDK
HHHHHHHHHHHHCCCCCCCCEEHHHHHCHHHHCCCEEEEECCCHHHCCCCCCCCCCCCCC
RAATFGMAMTEKQGGSDVRSNTTRATPNADGSVRLTGHKWFCSAPMSDAFLTLARDEAGI
HHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCEEEEECCEEEECCCCCHHHEEEECCCCCC
GCFLVPRFRPDGERNGILLQRLKDKCGNRANASAEIEYADAWAQPIGAPGRGIATILDMV
EEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCCCCCHHHHHHHHH
QQTRLDAATAPAGMMRQALREAWHHAQGREAFGKRLADQPLMQRVIADLALETEASLALC
HHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
LRTARAFDGAPHDDHERALARLLPALAKFWHNKRGPAFMAEAMECLGGIGYVEEAPLARL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH
YREAPVNSIWEGSGNVMCLDVMRVLGRHPECIVALRQELALARGAHHDFDRALGMLERRL
HHHCCCCHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
DATPETLEAQARWLTQRLAQCLQAALLLRHAPNAVGETFCTARLGDEATPLFGVLPAQAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHEECCCHHH
LAAILARINP
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]