| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is hisQ [H]
Identifier: 92114900
GI number: 92114900
Start: 3114532
End: 3115248
Strand: Direct
Name: hisQ [H]
Synonym: Csal_2782
Alternate gene names: 92114900
Gene position: 3114532-3115248 (Clockwise)
Preceding gene: 92114899
Following gene: 92114901
Centisome position: 84.25
GC content: 62.06
Gene sequence:
>717_bases ATGATCGACCTGCAGGGCTACGGCCCCCGGCTTCTCGAAGGTGCCCTGGTCACGGTGGAAGTCGCCGTGCTGTCGTTGTT GCTGGCCCTGGTTCTGGGCCTGCTCACCGCCAGCGCCAAGCTGTCTCGCCACCGACTCTTGCACCGGATCGCCACGCTCT ATACCACCCTCATCCGCGGGGTGCCCGACCTGGTATTGATGCTGCTGCTGTTCTTCGGCGGCCAGATGGGCGTCAATGCC ATCACCGACTGGCTGTATTACCAGTTCGATGTGGATATCTTCATCAACATCAACGAATTCGTCGCCGGCGTCGTCACCAT CGGCTTCATCTTCGGCGCCTACATGGGCGAGACGTTCCGGGGCGCCTTCCTCGCCGTCGACAGCGGCCAGCTCGAGGCCG GACGCGCCTACGGCATGTCCAGCCGCCTCATCTTTCGGCGCATTCAGTTTCCGCAAATGATGCGTCACGCCCTTCCCGGC CTGGGCAACAACTGGATGGTACTGCTCAAGACCACGGCCCTGGTCTCCGTCATCGGGCTTTCCGACATGGTGCGCATCGC TGCCGAGGCGACCAAGGCCACCCATGAACCCTTCCTGTTCATGATCCCGGTCGCCGTCATCTATCTGCTGATCGCGAGCG TGTCGGAGTGGGGCGTGGCGCGACTGCAAAAACGCTATAACGTCGGTTTCGGGGAGGCGGACGAATGGAACAACTGA
Upstream 100 bases:
>100_bases GAAGCCGGGCCGCCGGAAGAAGTGCTGGGCAATCCCCAGTCGGAACGCCTCCAGCAATTCCTGGCACCCAAGCACTGATG CCGCGACGGGAGAACATCGC
Downstream 100 bases:
>100_bases ACGCCTGGTTCACCGAACTGCTCGCGGACAACGCCATCTTCACGGCCAACACCCTGGGGTATTACCTCGACGGGCTGGGC AATACCGTGCGGCTGGTCTT
Product: amino acid ABC transporter permease
Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MIDLQGYGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRGVPDLVLMLLLFFGGQMGVNA ITDWLYYQFDVDIFININEFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRHALPG LGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSEWGVARLQKRYNVGFGEADEWNN
Sequences:
>Translated_238_residues MIDLQGYGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRGVPDLVLMLLLFFGGQMGVNA ITDWLYYQFDVDIFININEFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRHALPG LGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSEWGVARLQKRYNVGFGEADEWNN >Mature_238_residues MIDLQGYGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRGVPDLVLMLLLFFGGQMGVNA ITDWLYYQFDVDIFININEFVAGVVTIGFIFGAYMGETFRGAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRHALPG LGNNWMVLLKTTALVSVIGLSDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSEWGVARLQKRYNVGFGEADEWNN
Specific function: Part of the binding-protein-dependent transport system for histidine; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4215
COG function: function code E; ABC-type arginine transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788646, Length=232, Percent_Identity=51.7241379310345, Blast_Score=228, Evalue=4e-61, Organism=Escherichia coli, GI1787087, Length=224, Percent_Identity=35.7142857142857, Blast_Score=142, Evalue=2e-35, Organism=Escherichia coli, GI1787030, Length=220, Percent_Identity=33.1818181818182, Blast_Score=108, Evalue=3e-25, Organism=Escherichia coli, GI1788645, Length=215, Percent_Identity=30.6976744186047, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1788226, Length=207, Percent_Identity=28.5024154589372, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1786874, Length=181, Percent_Identity=27.0718232044199, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786873, Length=217, Percent_Identity=24.8847926267281, Blast_Score=62, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010065 - InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 26333; Mature: 26333
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDLQGYGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPDLVLMLLLFFGGQMGVNAITDWLYYQFDVDIFININEFVAGVVTIGFIFGAYMGETFR CHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC GAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRHALPGLGNNWMVLLKTTALVSVIGL CEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH SDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSEWGVARLQKRYNVGFGEADEWNN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIDLQGYGPRLLEGALVTVEVAVLSLLLALVLGLLTASAKLSRHRLLHRIATLYTTLIRG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC VPDLVLMLLLFFGGQMGVNAITDWLYYQFDVDIFININEFVAGVVTIGFIFGAYMGETFR CHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHC GAFLAVDSGQLEAGRAYGMSSRLIFRRIQFPQMMRHALPGLGNNWMVLLKTTALVSVIGL CEEEEECCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH SDMVRIAAEATKATHEPFLFMIPVAVIYLLIASVSEWGVARLQKRYNVGFGEADEWNN HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]
Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503 [H]