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The map label for this gene is ydjX [C]

Identifier: 92114890

GI number: 92114890

Start: 3103416

End: 3104114

Strand: Direct

Name: ydjX [C]

Synonym: Csal_2772

Alternate gene names: 92114890

Gene position: 3103416-3104114 (Clockwise)

Preceding gene: 92114889

Following gene: 92114893

Centisome position: 83.95

GC content: 68.24

Gene sequence:

>699_bases
ATGTCCCGCTCTCTCGGTATCCTCTTCGTCTTGCTGGGCGTCATGCTCGGCTGCGGCCTGCTCTGGCAATGGCTGGCCAT
GCACGACATCCTCACCCCGCAAGCCCTGCTCGCCTTGGCTCACGGCACCGTCTCCTGGCGCGATGCCGCCTGGGCGCCGC
TCGCGGTCATGGGCGTGTACGCCACCACCTCGCTGGTCATTTTCCCGCTGAGCATCCTGGTCGCGGTCACCGGGTTGATC
TTCGGCCCCGCCTGGGGCTTCGTCTACGCCCTGCTCGGCACGCTGTCGGCCTCGATGGCGACCTACTGGGTGGGACGAGC
CGTGGGCCGTGACGCCCTGCTTCGCCACGGCGGCCAGAAGCTAAACGGCCTGGCACGCCTGCTCGCCGGACGCGGCGTTC
GCACCATGGTGTTCTTCAATCTGCTGCCCTTGGCACCCTTCACCTTGACCAACATGCTCGCCGGCGCATGTCACCTGCGC
TTTCGCGACTACATGGTCGGCTCCACGCTGGGCATTGCGCCGGGCTTGCTGGGCGTCACCCTGCTGGGCAGTCAGCTCGG
CTCGCTGATGACCGCGGAAAGTCGCGAAGGCTTGCTGGTCGCCAGCGCCGGCATCGCCGTGGCGGTGGGCTTGCTGTGGG
GGCTCAAGCGCTATGCCGACCGACGCGGCAAGCGCGTGTCGACGCGCCCGCCGCAGTGA

Upstream 100 bases:

>100_bases
GCTGTAACCCCGCGACCACCGACATGGCGCCTCGAGGCGTCATGTTTCCCCCGTGCGGGCTCTCACGTATGCTTGTCGCA
TTTCACGTTCAGAGGCCCGC

Downstream 100 bases:

>100_bases
CATTCACTTGCTGGGAACTTCTTCCACCGGCGGCGCTTCGCTGACCGGCAGGGTTTGAAACACCGAACGCAGCACGCGAC
CGCGGTGCCGTAGCAGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MSRSLGILFVLLGVMLGCGLLWQWLAMHDILTPQALLALAHGTVSWRDAAWAPLAVMGVYATTSLVIFPLSILVAVTGLI
FGPAWGFVYALLGTLSASMATYWVGRAVGRDALLRHGGQKLNGLARLLAGRGVRTMVFFNLLPLAPFTLTNMLAGACHLR
FRDYMVGSTLGIAPGLLGVTLLGSQLGSLMTAESREGLLVASAGIAVAVGLLWGLKRYADRRGKRVSTRPPQ

Sequences:

>Translated_232_residues
MSRSLGILFVLLGVMLGCGLLWQWLAMHDILTPQALLALAHGTVSWRDAAWAPLAVMGVYATTSLVIFPLSILVAVTGLI
FGPAWGFVYALLGTLSASMATYWVGRAVGRDALLRHGGQKLNGLARLLAGRGVRTMVFFNLLPLAPFTLTNMLAGACHLR
FRDYMVGSTLGIAPGLLGVTLLGSQLGSLMTAESREGLLVASAGIAVAVGLLWGLKRYADRRGKRVSTRPPQ
>Mature_231_residues
SRSLGILFVLLGVMLGCGLLWQWLAMHDILTPQALLALAHGTVSWRDAAWAPLAVMGVYATTSLVIFPLSILVAVTGLIF
GPAWGFVYALLGTLSASMATYWVGRAVGRDALLRHGGQKLNGLARLLAGRGVRTMVFFNLLPLAPFTLTNMLAGACHLRF
RDYMVGSTLGIAPGLLGVTLLGSQLGSLMTAESREGLLVASAGIAVAVGLLWGLKRYADRRGKRVSTRPPQ

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=182, Percent_Identity=27.4725274725275, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24672; Mature: 24541

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRSLGILFVLLGVMLGCGLLWQWLAMHDILTPQALLALAHGTVSWRDAAWAPLAVMGVY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ATTSLVIFPLSILVAVTGLIFGPAWGFVYALLGTLSASMATYWVGRAVGRDALLRHGGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LNGLARLLAGRGVRTMVFFNLLPLAPFTLTNMLAGACHLRFRDYMVGSTLGIAPGLLGVT
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLGSQLGSLMTAESREGLLVASAGIAVAVGLLWGLKRYADRRGKRVSTRPPQ
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SRSLGILFVLLGVMLGCGLLWQWLAMHDILTPQALLALAHGTVSWRDAAWAPLAVMGVY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHH
ATTSLVIFPLSILVAVTGLIFGPAWGFVYALLGTLSASMATYWVGRAVGRDALLRHGGQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
LNGLARLLAGRGVRTMVFFNLLPLAPFTLTNMLAGACHLRFRDYMVGSTLGIAPGLLGVT
HHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
LLGSQLGSLMTAESREGLLVASAGIAVAVGLLWGLKRYADRRGKRVSTRPPQ
HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]