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The map label for this gene is dapA [H]

Identifier: 92114824

GI number: 92114824

Start: 3032808

End: 3033755

Strand: Direct

Name: dapA [H]

Synonym: Csal_2706

Alternate gene names: 92114824

Gene position: 3032808-3033755 (Clockwise)

Preceding gene: 92114823

Following gene: 92114825

Centisome position: 82.04

GC content: 64.45

Gene sequence:

>948_bases
ATGAACGATGCCATCTTTACCGGCTGCATTCCCGCACTGATGACGCCATGCACCGCCGACCGCCAGCCGGATTTCGACGC
TCTGGTCGCCAAGGGCCGTGAACTGATCGAGCTGGGGATGAGCGGCGTGGTGTACTGCGGCTCCATGGGCGACTGGCCGC
TGCTGAGCGAAGCACAACGTCAGGAAGGTGTCGCCAGGCTGGTCGAGGCGGGCATCCCGACCATCGTCGGCACCGGAGCG
GTCAATTCCCGGGAGGCCGTTTCCCATGCGGCCCATGCGGCCGAGGTCGGTGCCGCCGGGTTGATGGTCATTCCCCGCGT
CCTGTCCCGGGGCACGTCCGCCACCGCACAGAAGGCTCACTTCTCGGCCATCCTGGAGGCCGCGCCCGAGCTGCCGGCGG
TGATCTACAACAGCCCCTACTATGGCTTCGCCACTCGTGCTGACCTGTTCTTCGCGCTTCGCGCCCAGCACCCGAACCTG
ATCGGCTTCAAGGAGTTCGGTGGTGCCGATGATCTGCGCTATGCAGCGGAGCACATCACCTCACAGGACGCCGAGGTCAC
TCTGATGGTCGGCGTCGATACCACCGTCTATCACGGCTTCGTCAACTGCGGCGCCACCGGTGCCATCACCGGTATCGGCA
ATGCCTTGCCCCGCGAAGTGCTGCATCTCGTGACGCTCAGCCGGAAAGCCGCCCAGGGGGACGTGGTCGCGCGCCGTCAG
GCCAAGGAGCTCGAAGAAGCGCTCGGCGTGCTGTCCTCCTTCGACGAAGGCGCCGACCTGGTGCTTTATTACAAGCACCT
GATGGTCCTCAACGGCGAGCAGGAATACGCGCTGCACTTCAACGAGACCGATGCACTCAGCGACGCCCAGCGGCACTATA
TCGAAACCCAGTACGAGCTGTTCCGTACCTGGTACGCGAACTGGTCCGCCACCCTGGACGATGCCTGA

Upstream 100 bases:

>100_bases
ATCGCGAGCCCATGACGCCTTTGATCTCGACGCCTCAGCGCCGGTCACCACGCTGCGCTGAGGCCACTACATGCAATGGA
CCAACCTTCGAGGAACAACG

Downstream 100 bases:

>100_bases
TGCACCACCCTGCCTGACACGACGCGCTGTCCAGCGGCACGCTGGCAGATCGCGCCCTGCCATACCGGGAGGTCCAAGAC
CTCCCGGCTCCCTTTCCCGG

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNDAIFTGCIPALMTPCTADRQPDFDALVAKGRELIELGMSGVVYCGSMGDWPLLSEAQRQEGVARLVEAGIPTIVGTGA
VNSREAVSHAAHAAEVGAAGLMVIPRVLSRGTSATAQKAHFSAILEAAPELPAVIYNSPYYGFATRADLFFALRAQHPNL
IGFKEFGGADDLRYAAEHITSQDAEVTLMVGVDTTVYHGFVNCGATGAITGIGNALPREVLHLVTLSRKAAQGDVVARRQ
AKELEEALGVLSSFDEGADLVLYYKHLMVLNGEQEYALHFNETDALSDAQRHYIETQYELFRTWYANWSATLDDA

Sequences:

>Translated_315_residues
MNDAIFTGCIPALMTPCTADRQPDFDALVAKGRELIELGMSGVVYCGSMGDWPLLSEAQRQEGVARLVEAGIPTIVGTGA
VNSREAVSHAAHAAEVGAAGLMVIPRVLSRGTSATAQKAHFSAILEAAPELPAVIYNSPYYGFATRADLFFALRAQHPNL
IGFKEFGGADDLRYAAEHITSQDAEVTLMVGVDTTVYHGFVNCGATGAITGIGNALPREVLHLVTLSRKAAQGDVVARRQ
AKELEEALGVLSSFDEGADLVLYYKHLMVLNGEQEYALHFNETDALSDAQRHYIETQYELFRTWYANWSATLDDA
>Mature_315_residues
MNDAIFTGCIPALMTPCTADRQPDFDALVAKGRELIELGMSGVVYCGSMGDWPLLSEAQRQEGVARLVEAGIPTIVGTGA
VNSREAVSHAAHAAEVGAAGLMVIPRVLSRGTSATAQKAHFSAILEAAPELPAVIYNSPYYGFATRADLFFALRAQHPNL
IGFKEFGGADDLRYAAEHITSQDAEVTLMVGVDTTVYHGFVNCGATGAITGIGNALPREVLHLVTLSRKAAQGDVVARRQ
AKELEEALGVLSSFDEGADLVLYYKHLMVLNGEQEYALHFNETDALSDAQRHYIETQYELFRTWYANWSATLDDA

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Homo sapiens, GI31543060, Length=225, Percent_Identity=28, Blast_Score=72, Evalue=5e-13,
Organism=Escherichia coli, GI1786463, Length=238, Percent_Identity=29.4117647058824, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87082415, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 33969; Mature: 33969

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDAIFTGCIPALMTPCTADRQPDFDALVAKGRELIELGMSGVVYCGSMGDWPLLSEAQR
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHCCCCEEEECCCCCCCCHHHHHH
QEGVARLVEAGIPTIVGTGAVNSREAVSHAAHAAEVGAAGLMVIPRVLSRGTSATAQKAH
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
FSAILEAAPELPAVIYNSPYYGFATRADLFFALRAQHPNLIGFKEFGGADDLRYAAEHIT
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHEEECCCCCEECCHHCCCCHHHHHHHHHHC
SQDAEVTLMVGVDTTVYHGFVNCGATGAITGIGNALPREVLHLVTLSRKAAQGDVVARRQ
CCCCEEEEEEECCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
AKELEEALGVLSSFDEGADLVLYYKHLMVLNGEQEYALHFNETDALSDAQRHYIETQYEL
HHHHHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
FRTWYANWSATLDDA
HHHHHCCCCEECCCC
>Mature Secondary Structure
MNDAIFTGCIPALMTPCTADRQPDFDALVAKGRELIELGMSGVVYCGSMGDWPLLSEAQR
CCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCHHHHHHCCCCEEEECCCCCCCCHHHHHH
QEGVARLVEAGIPTIVGTGAVNSREAVSHAAHAAEVGAAGLMVIPRVLSRGTSATAQKAH
HHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHH
FSAILEAAPELPAVIYNSPYYGFATRADLFFALRAQHPNLIGFKEFGGADDLRYAAEHIT
HHHHHHHCCCCCEEEECCCCCCCHHHHHHHHEEECCCCCEECCHHCCCCHHHHHHHHHHC
SQDAEVTLMVGVDTTVYHGFVNCGATGAITGIGNALPREVLHLVTLSRKAAQGDVVARRQ
CCCCEEEEEEECCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
AKELEEALGVLSSFDEGADLVLYYKHLMVLNGEQEYALHFNETDALSDAQRHYIETQYEL
HHHHHHHHHHHHCCCCCCCHHHEEHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHH
FRTWYANWSATLDDA
HHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA