| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
Click here to switch to the map view.
The map label for this gene is feaR [C]
Identifier: 92114658
GI number: 92114658
Start: 2847628
End: 2848683
Strand: Direct
Name: feaR [C]
Synonym: Csal_2540
Alternate gene names: 92114658
Gene position: 2847628-2848683 (Clockwise)
Preceding gene: 92114650
Following gene: 92114665
Centisome position: 77.03
GC content: 63.26
Gene sequence:
>1056_bases ATGACAGCGGTAGTGGCGCATCGCCTCATGCCTGAGTCGGGCAAGCACGAGATCGAAGCCAAGGAATTGCGACGGCTATC GGCATCGCTGGTCACGCGACAGGCCCTCGATGCACCGAACTGGGACCGACGCTCGGCCCTGCTCGACGGACGCATGCAAC TCGCCGAGCTCCAGCCAGGCATGCAGCTGCGCTTGGCCGATGTCAGTGATCGTTACGATCTGGTCACCCGTGCCTTACTA CCGGCGGGGGTCAAGATCGCCCTGGTCGTCGCCGGCGAGGCTCGCGTGAGCTATGGCGATCAGGCAGTGTCGCTAGGGCT GTCGGCGCCGAGCACCGGACTGCTGGCCAGGCTTCCCGAAGCCACTCGCTTCGCTCGACGGGGACGTATCGGCGGCCACG AGCGGACCCTGACCCTAACCCTCACACCGGACTGGCTGTTACGACACGGCTACTCGATTACCTCGAGTCACACAGCGCAG CTGGTCCGCTGGTCGCCATCGCCGGGACTGCTGAGACTCGCCGAACGGTTGTTCGACGAGCGCTTCCTGTACAGCCGGGA TGATGCCCATCGCCTGCAACTGAGCGGCTGTGCTATGGCGATGGCCGGTGAAGCATTGGCCGCTCTCGGACACGATCGGG AGGGGCAGAAACATGACGAGGAAAGAGAACACTACCCGACAGACCGTCGACTGCAACGCTTGATGACGCTAGTCGAGAGC GGCGAAGCCCATCGTCTGGGGCAGGAAGAACTGGCCCGGCGTCTGGGTATGAGCCTGAGCAGTCTGCAACGACGATTCCT CGCCTGTTACGGCAAACCACTGGGACGCTTCCTTCGACGTCGTCGCCTCGAAACAGCCTTGGCGGCACTGCGCAATGAAG CCATCAGTGTCGAAGCTGCAGCCATTCTGGCCGGCTATACCAACGCCGCCAACTTCGCCACGGCCTTCAAGCGCGAATTT GGAGCACGGCCCGGCGACCTGCGTCGAGGACCTCAGACAAGCCAAGAAGAAACTCGCCTGCTCAAGGTGGCATCAGGCGG TAGCGGGCGGAGTTGA
Upstream 100 bases:
>100_bases CATTATCTCACCTGGCAGCAACGACCGCCTTTGCGAGGACAGCGGATCGCTTTGCAAAAACGGCTTTCCATCTTGATCAA AGTGAGGGGAACCTTTTGCG
Downstream 100 bases:
>100_bases CGGTCTCCTTCAGTGCTCCCAGCTGATCGAGGTCGGGACCGCTCAACGGCTGGTCGAGCCGGCGCTTGGGGTTGCGGGTA TTGAGCACGACGTGCACCGC
Product: AraC family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; AraC Family Transcription Regulator
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MTAVVAHRLMPESGKHEIEAKELRRLSASLVTRQALDAPNWDRRSALLDGRMQLAELQPGMQLRLADVSDRYDLVTRALL PAGVKIALVVAGEARVSYGDQAVSLGLSAPSTGLLARLPEATRFARRGRIGGHERTLTLTLTPDWLLRHGYSITSSHTAQ LVRWSPSPGLLRLAERLFDERFLYSRDDAHRLQLSGCAMAMAGEALAALGHDREGQKHDEEREHYPTDRRLQRLMTLVES GEAHRLGQEELARRLGMSLSSLQRRFLACYGKPLGRFLRRRRLETALAALRNEAISVEAAAILAGYTNAANFATAFKREF GARPGDLRRGPQTSQEETRLLKVASGGSGRS
Sequences:
>Translated_351_residues MTAVVAHRLMPESGKHEIEAKELRRLSASLVTRQALDAPNWDRRSALLDGRMQLAELQPGMQLRLADVSDRYDLVTRALL PAGVKIALVVAGEARVSYGDQAVSLGLSAPSTGLLARLPEATRFARRGRIGGHERTLTLTLTPDWLLRHGYSITSSHTAQ LVRWSPSPGLLRLAERLFDERFLYSRDDAHRLQLSGCAMAMAGEALAALGHDREGQKHDEEREHYPTDRRLQRLMTLVES GEAHRLGQEELARRLGMSLSSLQRRFLACYGKPLGRFLRRRRLETALAALRNEAISVEAAAILAGYTNAANFATAFKREF GARPGDLRRGPQTSQEETRLLKVASGGSGRS >Mature_350_residues TAVVAHRLMPESGKHEIEAKELRRLSASLVTRQALDAPNWDRRSALLDGRMQLAELQPGMQLRLADVSDRYDLVTRALLP AGVKIALVVAGEARVSYGDQAVSLGLSAPSTGLLARLPEATRFARRGRIGGHERTLTLTLTPDWLLRHGYSITSSHTAQL VRWSPSPGLLRLAERLFDERFLYSRDDAHRLQLSGCAMAMAGEALAALGHDREGQKHDEEREHYPTDRRLQRLMTLVESG EAHRLGQEELARRLGMSLSSLQRRFLACYGKPLGRFLRRRRLETALAALRNEAISVEAAAILAGYTNAANFATAFKREFG ARPGDLRRGPQTSQEETRLLKVASGGSGRS
Specific function: Positive Regulator Of Tyna/Maoa And Feab/Pada, The Genes For 2-Phenylethylamine Catabolism. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38859; Mature: 38728
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: PS01124 HTH_ARAC_FAMILY_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVVAHRLMPESGKHEIEAKELRRLSASLVTRQALDAPNWDRRSALLDGRMQLAELQPG CCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC MQLRLADVSDRYDLVTRALLPAGVKIALVVAGEARVSYGDQAVSLGLSAPSTGLLARLPE CEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHEECCCCCCCHHHHHCCH ATRFARRGRIGGHERTLTLTLTPDWLLRHGYSITSSHTAQLVRWSPSPGLLRLAERLFDE HHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH RFLYSRDDAHRLQLSGCAMAMAGEALAALGHDREGQKHDEEREHYPTDRRLQRLMTLVES HHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHC GEAHRLGQEELARRLGMSLSSLQRRFLACYGKPLGRFLRRRRLETALAALRNEAISVEAA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILAGYTNAANFATAFKREFGARPGDLRRGPQTSQEETRLLKVASGGSGRS HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCCC >Mature Secondary Structure TAVVAHRLMPESGKHEIEAKELRRLSASLVTRQALDAPNWDRRSALLDGRMQLAELQPG CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCC MQLRLADVSDRYDLVTRALLPAGVKIALVVAGEARVSYGDQAVSLGLSAPSTGLLARLPE CEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHEECCCCCCCHHHHHCCH ATRFARRGRIGGHERTLTLTLTPDWLLRHGYSITSSHTAQLVRWSPSPGLLRLAERLFDE HHHHHHHCCCCCCCEEEEEEECHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH RFLYSRDDAHRLQLSGCAMAMAGEALAALGHDREGQKHDEEREHYPTDRRLQRLMTLVES HHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHC GEAHRLGQEELARRLGMSLSSLQRRFLACYGKPLGRFLRRRRLETALAALRNEAISVEAA CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH AILAGYTNAANFATAFKREFGARPGDLRRGPQTSQEETRLLKVASGGSGRS HHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA