| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is rimK [C]
Identifier: 92114644
GI number: 92114644
Start: 2831872
End: 2833362
Strand: Direct
Name: rimK [C]
Synonym: Csal_2526
Alternate gene names: 92114644
Gene position: 2831872-2833362 (Clockwise)
Preceding gene: 92114638
Following gene: 92114646
Centisome position: 76.61
GC content: 65.59
Gene sequence:
>1491_bases ATGTCCCGTCTGCGCATCGTCGTCGACCGCCTCGACGACTGGTCCCCCTATTATCCCACCGAAGACCTGATCAGCGCCGC CGACTTCCTGGCCCAGGCGTCGGCGACACCGGACAAGACGCGCGACGCGACGCACGTCATCAACCTGTGCCGCGGTCTCG ATTATCTGGAGACCGGCTACTACGTGTCGCTGCTTGCCCAGGCCCGCGGCCAACGCGTCCTGCCATCGGTGGAGACGCTC AACCAGCTGTCGCGCAAGGCGCTGATCGACCTGCAACTCGAATCGCTCGAGCCGATGATGCGCGACCTCGAAAGACGCGG TGCGCTGGTGGGCGAAACGCTGCACCTGACGTTGCTGTTCGGCGAATGCGAGCACGACGGGCTCGGCCGCTTGGCGCGAC GCCTCTTCGAGCGTCTGCCGTGTCCCTTGCTGGAAGCCAAGTTCCAGAAGCGTCATGGCACATGGCGGCTGACCCGGCTC AAGCCCCTGGCGCTCACGTCCTTGCAGGGCGGCGAGCAGGATCGTTTCGCGGCCGCCCTGAACCGTCACTCGCGCAAGGT CTGGCGCACGCCCAAGGCGCGGCGTCGCTACCGTTTCGACCTGGCGATTCTGATCGATCCGAAGGAGGCGCTGCCGCCCA GCAACAAGAGTGCGCTCAAGCAGTTCATCCGCGCCGGCCGACAGCGCGGCATCGACGTCAGCCTGATCACCCGCAAGGAT GAGGGCCGTCTGGCCGAGTTCGATGCGCTGTTCATCCGCGAGACCACCCGACTCGACCATCACACCTACCGCATGGCCAA GCGCGCCGAGCACGAAGGCCTGGTGGTGATCGACGACCCGCAATCGATACTGCGCTGCACCAACAAGGTCTATCTGCATG CCTTGCTCGCGGCACGCGGCGTTCCCGCCCCGGAGGGGCTATTGCTCAGCCGCGACGACCTGGCGAACCTGCCGCGCAAG ATCGCCGAACTCGAATTTCCCATGGTGCTCAAGATCCCCGACGGGGCCTTTTCGAAGGGCGTGGTCAAGATCAACTCGCT CGACGAGCTCAGGCAGGAGGCCTCGCGTCTGTTCGCGTCGTCCGCCTTGCTGTTGCTGCAGGAGTGGCTGCCCACCGATT TCGACTGGCGGGTCGGCATCCTGGATGGCGAGGTGCTGTTTGCCAGCCGCTATTACATGGCGCGCGGGCATTGGCAGATC TACGACCACTCCCGGCAAAAGGTCCGCAGTGGCGGCTTCACCACGCATCCTCCCGCGGAGGTGCCCAAGGCGGTGATCAA GGCCGCGCTGAAGGCGACGCGGCTGATCGGCGACGGCCTCTACGGCGTCGACCTCAAGCAGATCGGCGAGCGCGTCGTGG TCATCGAGGTCAACGACAATCCCAATCTGGATGCCGGGGTCGAGGACGCCCACCTGGGCGCCGCGCTCTATGCGCGGGTG ATGGACGTCTTTCTGAAACGGATGGAGCGCCACGCGGCATTGCCGCGCTGA
Upstream 100 bases:
>100_bases GGCTATTGTTTTGCGGGCAGGCCACTGCGCATTCTAGGCGGGTTTTCGACAGGGCGATCGACGCCCGTCGCCGTTCCTTT TCCCCTTGCGAGGAAGGTTC
Downstream 100 bases:
>100_bases TTCGCCCCGCTGGCCGCCGGTCAGGCAGGCGCGACTCGCGAGCGGCGCCCTGACCGGCGACGCCTCAGCCTTCGAGCAGC AGCAACAGCGAGAGGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: Glutathione Synthase/Ribosomal; RimK Domain Protein ATP-Grasp; Glutathione Synthase; Ribosomal Protein-Related Protein; RimK-Like ATP-Grasp Domain Family; Alpha-L-Glutamate Ligase Family Protein; RimK-Like ATP-Grasp; 30S Ribosomal Protein-Related Protein; GCN5-Related N-Acetyltransferase; Ribosomal Protein; Fused RimK-Like Domain/ Domain-Containing Protein; RimK Domain-Containing Protein; 30S Ribosomal Protein; Ribosomal Protein-Like Protein; Rimk Domain Protein ATP-Grasp; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Ribosomal -Glutamic Acid Ligase
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSRLRIVVDRLDDWSPYYPTEDLISAADFLAQASATPDKTRDATHVINLCRGLDYLETGYYVSLLAQARGQRVLPSVETL NQLSRKALIDLQLESLEPMMRDLERRGALVGETLHLTLLFGECEHDGLGRLARRLFERLPCPLLEAKFQKRHGTWRLTRL KPLALTSLQGGEQDRFAAALNRHSRKVWRTPKARRRYRFDLAILIDPKEALPPSNKSALKQFIRAGRQRGIDVSLITRKD EGRLAEFDALFIRETTRLDHHTYRMAKRAEHEGLVVIDDPQSILRCTNKVYLHALLAARGVPAPEGLLLSRDDLANLPRK IAELEFPMVLKIPDGAFSKGVVKINSLDELRQEASRLFASSALLLLQEWLPTDFDWRVGILDGEVLFASRYYMARGHWQI YDHSRQKVRSGGFTTHPPAEVPKAVIKAALKATRLIGDGLYGVDLKQIGERVVVIEVNDNPNLDAGVEDAHLGAALYARV MDVFLKRMERHAALPR
Sequences:
>Translated_496_residues MSRLRIVVDRLDDWSPYYPTEDLISAADFLAQASATPDKTRDATHVINLCRGLDYLETGYYVSLLAQARGQRVLPSVETL NQLSRKALIDLQLESLEPMMRDLERRGALVGETLHLTLLFGECEHDGLGRLARRLFERLPCPLLEAKFQKRHGTWRLTRL KPLALTSLQGGEQDRFAAALNRHSRKVWRTPKARRRYRFDLAILIDPKEALPPSNKSALKQFIRAGRQRGIDVSLITRKD EGRLAEFDALFIRETTRLDHHTYRMAKRAEHEGLVVIDDPQSILRCTNKVYLHALLAARGVPAPEGLLLSRDDLANLPRK IAELEFPMVLKIPDGAFSKGVVKINSLDELRQEASRLFASSALLLLQEWLPTDFDWRVGILDGEVLFASRYYMARGHWQI YDHSRQKVRSGGFTTHPPAEVPKAVIKAALKATRLIGDGLYGVDLKQIGERVVVIEVNDNPNLDAGVEDAHLGAALYARV MDVFLKRMERHAALPR >Mature_495_residues SRLRIVVDRLDDWSPYYPTEDLISAADFLAQASATPDKTRDATHVINLCRGLDYLETGYYVSLLAQARGQRVLPSVETLN QLSRKALIDLQLESLEPMMRDLERRGALVGETLHLTLLFGECEHDGLGRLARRLFERLPCPLLEAKFQKRHGTWRLTRLK PLALTSLQGGEQDRFAAALNRHSRKVWRTPKARRRYRFDLAILIDPKEALPPSNKSALKQFIRAGRQRGIDVSLITRKDE GRLAEFDALFIRETTRLDHHTYRMAKRAEHEGLVVIDDPQSILRCTNKVYLHALLAARGVPAPEGLLLSRDDLANLPRKI AELEFPMVLKIPDGAFSKGVVKINSLDELRQEASRLFASSALLLLQEWLPTDFDWRVGILDGEVLFASRYYMARGHWQIY DHSRQKVRSGGFTTHPPAEVPKAVIKAALKATRLIGDGLYGVDLKQIGERVVVIEVNDNPNLDAGVEDAHLGAALYARVM DVFLKRMERHAALPR
Specific function: Responsible For The Addition Of Glutamate Residues To The C-Terminus Of Ribosomal Protein S6. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56205; Mature: 56073
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLRIVVDRLDDWSPYYPTEDLISAADFLAQASATPDKTRDATHVINLCRGLDYLETGY CCCHHEEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCH YVSLLAQARGQRVLPSVETLNQLSRKALIDLQLESLEPMMRDLERRGALVGETLHLTLLF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE GECEHDGLGRLARRLFERLPCPLLEAKFQKRHGTWRLTRLKPLALTSLQGGEQDRFAAAL ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCHHEECCCCCCHHHHHHHH NRHSRKVWRTPKARRRYRFDLAILIDPKEALPPSNKSALKQFIRAGRQRGIDVSLITRKD HHHHHHHHCCCHHHHEEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECC EGRLAEFDALFIRETTRLDHHTYRMAKRAEHEGLVVIDDPQSILRCTNKVYLHALLAARG CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC VPAPEGLLLSRDDLANLPRKIAELEFPMVLKIPDGAFSKGVVKINSLDELRQEASRLFAS CCCCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHH SALLLLQEWLPTDFDWRVGILDGEVLFASRYYMARGHWQIYDHSRQKVRSGGFTTHPPAE HHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHH VPKAVIKAALKATRLIGDGLYGVDLKQIGERVVVIEVNDNPNLDAGVEDAHLGAALYARV HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH MDVFLKRMERHAALPR HHHHHHHHHHHHCCCC >Mature Secondary Structure SRLRIVVDRLDDWSPYYPTEDLISAADFLAQASATPDKTRDATHVINLCRGLDYLETGY CCHHEEEHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCHHHCCH YVSLLAQARGQRVLPSVETLNQLSRKALIDLQLESLEPMMRDLERRGALVGETLHLTLLF HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEE GECEHDGLGRLARRLFERLPCPLLEAKFQKRHGTWRLTRLKPLALTSLQGGEQDRFAAAL ECCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCHHEECCCCCCHHHHHHHH NRHSRKVWRTPKARRRYRFDLAILIDPKEALPPSNKSALKQFIRAGRQRGIDVSLITRKD HHHHHHHHCCCHHHHEEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHCCCEEEEEEECC EGRLAEFDALFIRETTRLDHHTYRMAKRAEHEGLVVIDDPQSILRCTNKVYLHALLAARG CCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCC VPAPEGLLLSRDDLANLPRKIAELEFPMVLKIPDGAFSKGVVKINSLDELRQEASRLFAS CCCCCCEEECCHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCHHHHHHHHHHHHHH SALLLLQEWLPTDFDWRVGILDGEVLFASRYYMARGHWQIYDHSRQKVRSGGFTTHPPAE HHHHHHHHHCCCCCCEEEEEECCCEEEHHHHHHCCCCEEEEHHHHHHHHCCCCCCCCCHH VPKAVIKAALKATRLIGDGLYGVDLKQIGERVVVIEVNDNPNLDAGVEDAHLGAALYARV HHHHHHHHHHHHHHHHCCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHH MDVFLKRMERHAALPR HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Glu; Ribosomal protein S6 [C]
Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]
General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA