Click here to switch to the map view.

The map label for this gene is yeaW [H]

Identifier: 92114573

GI number: 92114573

Start: 2761183

End: 2762349

Strand: Direct

Name: yeaW [H]

Synonym: Csal_2455

Alternate gene names: 92114573

Gene position: 2761183-2762349 (Clockwise)

Preceding gene: 92114572

Following gene: 92114574

Centisome position: 74.69

GC content: 63.24

Gene sequence:

>1167_bases
ATGACCGACACGACTCCCCAAGCGTGGGCGGAGCAGCCCGCGGAAAAGGCACTGACCCTTCCGTCCCGTTATTTCTACGA
CCCCCAACTGTTCGCCGCCGAACGTGACCGCATCTTCATGGGTGCCTGGCATTTCGCCTGCCACGTCAACGAGGTGACCG
AGCCCGGCGCCTTCGTGGTGCGCGACATCTTCGATCAGAGCGTCATCGTGATGCGGGACCGTCAGGGCGAGCTGCACGCC
TTTCACAATGTCTGCCAGCACCGTGGCAACCGCCTGCTCGACGAGACACGCGGCGTGCAGAAGGGCGTCATCCGGTGTGC
CTATCATTCCTGGTGCTACGGGCTGGACGGCAGCCTGCGTGCCGCACCGCGCAGCGATCGGATCGCGGCCTTCAATGTCG
ACGACTACCACATCCCACCGGTACGCCTGGAAGTCTTCGCCGGGTGCGTCTACTTCAATCTCGATCCCGACGCGACCGAC
ATGCAGACGCTCTTCCCCGGGGCCGAGGCCGCCATCCGCGAGGCGATTCCGGACCTGGACGCCATGCAACTGATCCAGGA
AGACGACGTCATCGTCCCGGCCAACTGGAAAGTGATCATGGACAACTCCATCGAGGGCTATCACTTCCAGCTTTCGGGGC
CCCATCACGTCGACCTGGCCGCCCTGATCGATTTCGATGGCTACCGCCTGACCCATCACGACAACTGGTGGACCTACGGC
GCACCGCCCAATGCCGATGCCAAGCAGGCATACGGCGTGCCGCTGGAGCGTCCGGCCGGCAACGGCGACGGCTTTTTCAA
CATCGGCATCTGGCCGCACAACACCTTCTACCAGTTCCCCTTCTCGCAGTGCATGGGCACGTTCATGATCATCCCGCTGG
ATGCCGAGCGCTCGATCCTGCGCTTCGGGTATTACACCCCGCACGACACGCTGCCGGAAGTGACCAGGGCCAGCATGCGC
TGGATGAACGAAGAACTCGGCCCCGAGGACATCGAACTCAACATCAGCGTGCAGAAAGGCCTGCACTCGCTGGGCTACGA
TCAGGGCCGCTACATGATCGATGCCGCACGCAGCAACGAAAGCGAGCATCTGGTGCTGCACTTCCACCGCCTGGTGTTCC
AGGCCTTGCAGGGTGACGCCAGCACGCCCCAGGAGGCGCCGTCATGA

Upstream 100 bases:

>100_bases
CGGTCCGCCACGTCGTGTCAGAAAACATCATGTGGGCCGTTCGGTGCCGCCTTAGCCTTGTGCCAGACCAACGACACAAA
CCGCTTGCATGAGGCAGGAC

Downstream 100 bases:

>100_bases
CATTCACCGGTCAACGCGTGCTGGTGACCGGCGGCGCCCGCGGTATCGGCGCCGCCACGGCACGGCGCTTTCTCGAACAG
GGGGCGCGCGTCGCCATCGG

Product: Rieske (2Fe-2S) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MTDTTPQAWAEQPAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVVRDIFDQSVIVMRDRQGELHA
FHNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLRAAPRSDRIAAFNVDDYHIPPVRLEVFAGCVYFNLDPDATD
MQTLFPGAEAAIREAIPDLDAMQLIQEDDVIVPANWKVIMDNSIEGYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYG
APPNADAKQAYGVPLERPAGNGDGFFNIGIWPHNTFYQFPFSQCMGTFMIIPLDAERSILRFGYYTPHDTLPEVTRASMR
WMNEELGPEDIELNISVQKGLHSLGYDQGRYMIDAARSNESEHLVLHFHRLVFQALQGDASTPQEAPS

Sequences:

>Translated_388_residues
MTDTTPQAWAEQPAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVVRDIFDQSVIVMRDRQGELHA
FHNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLRAAPRSDRIAAFNVDDYHIPPVRLEVFAGCVYFNLDPDATD
MQTLFPGAEAAIREAIPDLDAMQLIQEDDVIVPANWKVIMDNSIEGYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYG
APPNADAKQAYGVPLERPAGNGDGFFNIGIWPHNTFYQFPFSQCMGTFMIIPLDAERSILRFGYYTPHDTLPEVTRASMR
WMNEELGPEDIELNISVQKGLHSLGYDQGRYMIDAARSNESEHLVLHFHRLVFQALQGDASTPQEAPS
>Mature_387_residues
TDTTPQAWAEQPAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVVRDIFDQSVIVMRDRQGELHAF
HNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLRAAPRSDRIAAFNVDDYHIPPVRLEVFAGCVYFNLDPDATDM
QTLFPGAEAAIREAIPDLDAMQLIQEDDVIVPANWKVIMDNSIEGYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYGA
PPNADAKQAYGVPLERPAGNGDGFFNIGIWPHNTFYQFPFSQCMGTFMIIPLDAERSILRFGYYTPHDTLPEVTRASMRW
MNEELGPEDIELNISVQKGLHSLGYDQGRYMIDAARSNESEHLVLHFHRLVFQALQGDASTPQEAPS

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=375, Percent_Identity=34.6666666666667, Blast_Score=231, Evalue=8e-62,
Organism=Escherichia coli, GI1788888, Length=145, Percent_Identity=29.6551724137931, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 44059; Mature: 43928

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTTPQAWAEQPAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVV
CCCCCCHHHHHCHHHHHHCCCHHHCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCHHHH
RDIFDQSVIVMRDRQGELHAFHNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLR
HHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
AAPRSDRIAAFNVDDYHIPPVRLEVFAGCVYFNLDPDATDMQTLFPGAEAAIREAIPDLD
CCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCHH
AMQLIQEDDVIVPANWKVIMDNSIEGYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYG
HHHHHCCCCEEECCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCEEECC
APPNADAKQAYGVPLERPAGNGDGFFNIGIWPHNTFYQFPFSQCMGTFMIIPLDAERSIL
CCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHHCCEEEEEEECCCCCEE
RFGYYTPHDTLPEVTRASMRWMNEELGPEDIELNISVQKGLHSLGYDQGRYMIDAARSNE
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCEEEEECCCCC
SEHLVLHFHRLVFQALQGDASTPQEAPS
CCEEEHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TDTTPQAWAEQPAEKALTLPSRYFYDPQLFAAERDRIFMGAWHFACHVNEVTEPGAFVV
CCCCCHHHHHCHHHHHHCCCHHHCCCCEEEECCCCEEEEEEEEEEEEECCCCCCCHHHH
RDIFDQSVIVMRDRQGELHAFHNVCQHRGNRLLDETRGVQKGVIRCAYHSWCYGLDGSLR
HHHCCCCEEEEECCCCHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
AAPRSDRIAAFNVDDYHIPPVRLEVFAGCVYFNLDPDATDMQTLFPGAEAAIREAIPDLD
CCCCCCCEEEEECCCCCCCCEEEEEEEEEEEEECCCCCCCHHHHCCCHHHHHHHHCCCHH
AMQLIQEDDVIVPANWKVIMDNSIEGYHFQLSGPHHVDLAALIDFDGYRLTHHDNWWTYG
HHHHHCCCCEEECCCCEEEEECCCCCEEEEECCCCCEEEEEEEECCCEEEEECCCEEECC
APPNADAKQAYGVPLERPAGNGDGFFNIGIWPHNTFYQFPFSQCMGTFMIIPLDAERSIL
CCCCCCCHHHCCCCCCCCCCCCCCEEEEEECCCCCEEECCHHHHCCEEEEEEECCCCCEE
RFGYYTPHDTLPEVTRASMRWMNEELGPEDIELNISVQKGLHSLGYDQGRYMIDAARSNE
EECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHCCCCCCCEEEEECCCCC
SEHLVLHFHRLVFQALQGDASTPQEAPS
CCEEEHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]