| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is uspA2 [H]
Identifier: 92114515
GI number: 92114515
Start: 2688091
End: 2688546
Strand: Direct
Name: uspA2 [H]
Synonym: Csal_2397
Alternate gene names: 92114515
Gene position: 2688091-2688546 (Clockwise)
Preceding gene: 92114513
Following gene: 92114517
Centisome position: 72.72
GC content: 62.06
Gene sequence:
>456_bases ATGAGTAACGAGTACACACACGTCTTAGTCGCCGTCGATCTGACCAAGGATTCGAACAAGGTGCTCGAGCGTGCCATTCC CATCGCCGAGCGTAATCACGCCAAGCTTTCGGTCATGCATACGCTCGAACCGCTGGGCTTCGCCTATGGGGGCGATATCC CCATGGATTTGACCAGCATTCAGGATCAGCTCGACGAGCACGCCAAGCAGCGCCTGGCGGAGATCGCCGATCCCCACGGC ATCCTCTCGGAGAACCAGCACGTCGTGGTCGGCATGCCGGATACCGAGATTCACCGTTTCGCCGCCGAGCACGATGTCGA CTTGATCGTGGTCGGCTCGCACGGACGCCACGGGTTCGCCCTGCTGCTCGGTTCGACCTCCACCGGCGTGCTGCACGGCG CGCAATGCGACGTGCTCGCGGTACGCGTCGGCAAGGACGGCGAAGTCGACGAATGA
Upstream 100 bases:
>100_bases AACGTGCCTCCACATGTGCACTGATTGATTTGAAGCATTGTTTCGTCGTTTCGGCGCGCCTAAAGTAGAAGCGTTCATCG ACAAGGTGGGAGATGCCCCC
Downstream 100 bases:
>100_bases TCGCGCCGCGCCGGGCACGTCGTTCGTGCCCGGCGCGACGTTTCCTACTACTCCTCGCCCTCGGCCATGGCTTCCAGTTC CATCCAGCGTGACATCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MSNEYTHVLVAVDLTKDSNKVLERAIPIAERNHAKLSVMHTLEPLGFAYGGDIPMDLTSIQDQLDEHAKQRLAEIADPHG ILSENQHVVVGMPDTEIHRFAAEHDVDLIVVGSHGRHGFALLLGSTSTGVLHGAQCDVLAVRVGKDGEVDE
Sequences:
>Translated_151_residues MSNEYTHVLVAVDLTKDSNKVLERAIPIAERNHAKLSVMHTLEPLGFAYGGDIPMDLTSIQDQLDEHAKQRLAEIADPHG ILSENQHVVVGMPDTEIHRFAAEHDVDLIVVGSHGRHGFALLLGSTSTGVLHGAQCDVLAVRVGKDGEVDE >Mature_150_residues SNEYTHVLVAVDLTKDSNKVLERAIPIAERNHAKLSVMHTLEPLGFAYGGDIPMDLTSIQDQLDEHAKQRLAEIADPHGI LSENQHVVVGMPDTEIHRFAAEHDVDLIVVGSHGRHGFALLLGSTSTGVLHGAQCDVLAVRVGKDGEVDE
Specific function: Involved in stress response [H]
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: 1660 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1580 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 290 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 4003 Molecules/Cell In: Growth Phase, G
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 16372; Mature: 16240
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNEYTHVLVAVDLTKDSNKVLERAIPIAERNHAKLSVMHTLEPLGFAYGGDIPMDLTSI CCCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHH QDQLDEHAKQRLAEIADPHGILSENQHVVVGMPDTEIHRFAAEHDVDLIVVGSHGRHGFA HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCEEE LLLGSTSTGVLHGAQCDVLAVRVGKDGEVDE EEEECCCCCEEECCCCEEEEEEECCCCCCCC >Mature Secondary Structure SNEYTHVLVAVDLTKDSNKVLERAIPIAERNHAKLSVMHTLEPLGFAYGGDIPMDLTSI CCCEEEEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEEEHHCCCCCCCCCCCCCCHHHH QDQLDEHAKQRLAEIADPHGILSENQHVVVGMPDTEIHRFAAEHDVDLIVVGSHGRHGFA HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEECCCCCCEEE LLLGSTSTGVLHGAQCDVLAVRVGKDGEVDE EEEECCCCCEEECCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8071197; 12704232 [H]