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The map label for this gene is osmF [H]

Identifier: 92114477

GI number: 92114477

Start: 2647936

End: 2648838

Strand: Direct

Name: osmF [H]

Synonym: Csal_2357

Alternate gene names: 92114477

Gene position: 2647936-2648838 (Clockwise)

Preceding gene: 92114476

Following gene: 92114478

Centisome position: 71.63

GC content: 65.12

Gene sequence:

>903_bases
ATGCGACAATCCCTGCTCCCGCTGATCGGCGGCCTGGCTCTCGCCAGCACCCTCGTCAGCCCCCTCACCAGTACCGCCGC
CCACGCCGAGGACATCACCGTCGGCGGCAAGAACTTCACCGAACAGCTCATCCTGTCAAGCATGACCACGCAATACCTCC
AGGCCCATGGCTACGAGGTGGACCAGCGCGCCGGCATGGGCACCACGGTGCTGCGCCGCGCCCAGGAGAGCGGCCAGGTG
GATCTCTACTGGGAATACACCGGCACCTCGCTGATCAGCTACAACAAGGTGACCGAGGACCTCTCGCCGGAGGCCACCTA
CGAGCGCGTCAAGGAACTCGACGCCGAGAAGGGGCTGATCTGGCTCGAGCCCTCCGAGGCCAACAACACCTACGCCCTGG
CCATGCGCAAAGACGACGCCGAAGCACGCGGCATCGCCACCATTTCCGATCTCGCCGACGTCATCAATGGCGGCCAGGAA
CTTGTGCTCGCCTCCAACGCGACCTTCTACTCGCGCGATGACGGCCTGCGCCCGATGCAGGAGACCTATGGCTTCGAGTT
CGGCCGGCGCAACGTGAAGCGGATGGACCAGGGCCTGACCCTGACCTCGCTGGATCAGGAAGAAGTCGACGTGGCGATGA
CCACGGCGACCAACGGGCGCATCCCGGCCCTGGACCTGACCGTCCTCGAGGACGACAAGAACTTCTTCCCCGACTATGCG
CTGACCCCGGTGGTCCGCGAGGAAACGCTCGAGGCGAACCCCGATCTCGACGAACGCATGAACGCGCTCTCCGCCCTGCT
CGATGACAGCACCATGGCGCGCCTCAACGCCAAGGTCGACGTCGACAAGCAGCCCGTCGAGAAGGTCGCCGAGCGCTTCC
TCGAGGAGCACGACCTGCTGTAA

Upstream 100 bases:

>100_bases
ACGACCTGCTGTAATCGCCGTTCCGCAGACAGCGGGCACCGTGCCGGTCGACGGCGCACGGTGCCCGCTGCTTTCCCCTT
CTCAGGCAAGAGTGTCACCC

Downstream 100 bases:

>100_bases
CCGGCACGCGGAGCCAGGCTCCGCCGCCGACCGCGACGCGGGCCGTCTCATACCGGCCCCGTCTTTCGTCACGCCTTTCT
TCGCCAGCACCCGAGGCCAC

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MRQSLLPLIGGLALASTLVSPLTSTAAHAEDITVGGKNFTEQLILSSMTTQYLQAHGYEVDQRAGMGTTVLRRAQESGQV
DLYWEYTGTSLISYNKVTEDLSPEATYERVKELDAEKGLIWLEPSEANNTYALAMRKDDAEARGIATISDLADVINGGQE
LVLASNATFYSRDDGLRPMQETYGFEFGRRNVKRMDQGLTLTSLDQEEVDVAMTTATNGRIPALDLTVLEDDKNFFPDYA
LTPVVREETLEANPDLDERMNALSALLDDSTMARLNAKVDVDKQPVEKVAERFLEEHDLL

Sequences:

>Translated_300_residues
MRQSLLPLIGGLALASTLVSPLTSTAAHAEDITVGGKNFTEQLILSSMTTQYLQAHGYEVDQRAGMGTTVLRRAQESGQV
DLYWEYTGTSLISYNKVTEDLSPEATYERVKELDAEKGLIWLEPSEANNTYALAMRKDDAEARGIATISDLADVINGGQE
LVLASNATFYSRDDGLRPMQETYGFEFGRRNVKRMDQGLTLTSLDQEEVDVAMTTATNGRIPALDLTVLEDDKNFFPDYA
LTPVVREETLEANPDLDERMNALSALLDDSTMARLNAKVDVDKQPVEKVAERFLEEHDLL
>Mature_300_residues
MRQSLLPLIGGLALASTLVSPLTSTAAHAEDITVGGKNFTEQLILSSMTTQYLQAHGYEVDQRAGMGTTVLRRAQESGQV
DLYWEYTGTSLISYNKVTEDLSPEATYERVKELDAEKGLIWLEPSEANNTYALAMRKDDAEARGIATISDLADVINGGQE
LVLASNATFYSRDDGLRPMQETYGFEFGRRNVKRMDQGLTLTSLDQEEVDVAMTTATNGRIPALDLTVLEDDKNFFPDYA
LTPVVREETLEANPDLDERMNALSALLDDSTMARLNAKVDVDKQPVEKVAERFLEEHDLL

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=305, Percent_Identity=33.4426229508197, Blast_Score=156, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33222; Mature: 33222

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQSLLPLIGGLALASTLVSPLTSTAAHAEDITVGGKNFTEQLILSSMTTQYLQAHGYEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCC
DQRAGMGTTVLRRAQESGQVDLYWEYTGTSLISYNKVTEDLSPEATYERVKELDAEKGLI
HHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHCCCCHHHHHHHHHHHHHCCEE
WLEPSEANNTYALAMRKDDAEARGIATISDLADVINGGQELVLASNATFYSRDDGLRPMQ
EECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHH
ETYGFEFGRRNVKRMDQGLTLTSLDQEEVDVAMTTATNGRIPALDLTVLEDDKNFFPDYA
HHHCCHHHHHHHHHHHCCCEEEECCHHHHCEEEEECCCCCCCEEEEEEEECCCCCCCCCC
LTPVVREETLEANPDLDERMNALSALLDDSTMARLNAKVDVDKQPVEKVAERFLEEHDLL
CCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQSLLPLIGGLALASTLVSPLTSTAAHAEDITVGGKNFTEQLILSSMTTQYLQAHGYEV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCC
DQRAGMGTTVLRRAQESGQVDLYWEYTGTSLISYNKVTEDLSPEATYERVKELDAEKGLI
HHHCCCCHHHHHHHHHCCCEEEEEEECCCEEEEHHHHHHCCCCHHHHHHHHHHHHHCCEE
WLEPSEANNTYALAMRKDDAEARGIATISDLADVINGGQELVLASNATFYSRDDGLRPMQ
EECCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEECCCCCCCHHH
ETYGFEFGRRNVKRMDQGLTLTSLDQEEVDVAMTTATNGRIPALDLTVLEDDKNFFPDYA
HHHCCHHHHHHHHHHHCCCEEEECCHHHHCEEEEECCCCCCCEEEEEEEECCCCCCCCCC
LTPVVREETLEANPDLDERMNALSALLDDSTMARLNAKVDVDKQPVEKVAERFLEEHDLL
CCCHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]