Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

Click here to switch to the map view.

The map label for this gene is yxeQ [H]

Identifier: 92114478

GI number: 92114478

Start: 2648943

End: 2650247

Strand: Direct

Name: yxeQ [H]

Synonym: Csal_2358

Alternate gene names: 92114478

Gene position: 2648943-2650247 (Clockwise)

Preceding gene: 92114477

Following gene: 92114479

Centisome position: 71.66

GC content: 71.65

Gene sequence:

>1305_bases
ATGCACGACCACGCCCCCCTCGACTGGATGCACGGGGTCGATCTCTCCGCCCTGGACGACGCCCACCTCCACCAGGCCAA
GCGCTGCCTGCTCGACCTGCTGGGCGTGGCCGCCGGCGCCACCCGCACGCCGCTGGCCGACAAGGCCACGCGCTTCGTGA
CCTCCCAGCATGGCGGCGACCGCCCGCTGCTGTTCACCGCCGGAAAGGCCTCGCCCACCGGCGTCGCCCTGCACGGGGCC
TGGCTGATCGACGCGCTCGACGCCCACGACGGCCAGGTGCTGACCAAGGGTCATGCCGGCGTGGCCCTGCTGCCCGGCTT
GCTGGCGCTGCCCGAGGTGGCCGACCTCTCCGGGCGCGACTTCCTCGCCCTGCTCGCCTACGGCTACGAGATCGCCACCC
GCGCGGGGATCGCCCTGCACGCCACCAGCCCGGACTACCACACCTCCGGCGCCTGGAATGCCCTGGGAGTGGCCGCCGTG
GCCGCGCGCCTGCGCGGAGCCGATGTCGAGACCCTGCATCATGCCCTCGGCATCGCCGAGTTCTATGGCCCGCGCAGCCA
GATGATGCGCTGCATCGACCATCCCACGATGCTCAAGGACGGCTCCGGCTGGGGCGCGATGACCGGCATCTCCGCCGCCC
TGCTGGCCGAGGACGGCTTCACCGGCGCCCCGGCGCTGACCGTGACCGCACCGGACGTAGCCGCGCTCTGGCAGGACCTG
GGCGAGCGCTGGTATCTCCAAGAGCAGTACTTCAAGGCCTACCCGGTCTGCCGCTGGGCCCAGCCCGCGGTGGAAGCCGT
GCTGTCACTGCCCGCCGAGCAACGCGCCCCCGCCGCCATCGCGCGCATCGAGATCGTCACCTTCCACGAGGGCAAGCGCC
TGCATGTGACGCACCCGACCACCACCGAGCAGGCTCAGTACAGCCTGCCCTGGTCCGTCGCCTGCGCCCTGGGCCGAGGC
ACCGTGGATGTCGCGGGCGTCAGCGACGAACTCGACGCCCCGGATCTCAAGGCCCTGGCCAGCCGGGTGGAGATTCACGA
GGACGACACCTTCAACGCCCGCTTTCCCGCCGAGCGCTGGGCGCGCGCCCGTCTGCATCTGGAAAGCGGCGAGATCATCG
AAAGTGCCGACTTCGAGGCGCGCGGCAATCACGATTGCCCGCTCTCGGACGACGAGGTCGTCGCCAAGTACCGGGCACTG
GCCGAGCCCGTGCTGGGCGAGCGGGCAGCCCGGTTGCAGGACGTGGTGATGAGCCTCGAGACCCGCCCGGCAAGCGACCT
GCTGGCGCTGCTCGGCGCGCCTTGA

Upstream 100 bases:

>100_bases
CACGCGGAGCCAGGCTCCGCCGCCGACCGCGACGCGGGCCGTCTCATACCGGCCCCGTCTTTCGTCACGCCTTTCTTCGC
CAGCACCCGAGGCCACTGCC

Downstream 100 bases:

>100_bases
AGCAACGCCGCGCGGGTGGGATGATCCGCCTCGCCGGCGAGGCACGCGCCGGCATCTTTCAGACCCAGCGTAGCGAGACG
CCACCATGCACTATCAGGAT

Product: MmgE/PrpD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA
WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV
AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL
GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG
TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL
AEPVLGERAARLQDVVMSLETRPASDLLALLGAP

Sequences:

>Translated_434_residues
MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA
WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV
AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL
GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG
TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL
AEPVLGERAARLQDVVMSLETRPASDLLALLGAP
>Mature_434_residues
MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA
WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV
AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL
GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG
TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL
AEPVLGERAARLQDVVMSLETRPASDLLALLGAP

Specific function: Unknown

COG id: COG2079

COG function: function code R; Uncharacterized protein involved in propionate catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prpD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005656 [H]

Pfam domain/function: PF03972 MmgE_PrpD [H]

EC number: NA

Molecular weight: Translated: 46446; Mature: 46446

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGD
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
RPLLFTAGKASPTGVALHGAWLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRD
CCEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHCCCCCH
FLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAVAARLRGADVETLHHALGIAE
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL
HHCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH
GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPT
HHHEEHHHHHHHHCCCHHCCCHHHHHHHHCCCHHCCCCEEEEEEEEEEECCCEEEEECCC
TTEQAQYSLPWSVACALGRGTVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERW
CCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
ARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRALAEPVLGERAARLQDVVMSLE
HHHHEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRPASDLLALLGAP
CCCHHHHHHHHCCC
>Mature Secondary Structure
MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGD
CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC
RPLLFTAGKASPTGVALHGAWLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRD
CCEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHCCCCCH
FLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAVAARLRGADVETLHHALGIAE
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
FYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL
HHCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH
GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPT
HHHEEHHHHHHHHCCCHHCCCHHHHHHHHCCCHHCCCCEEEEEEEEEEECCCEEEEECCC
TTEQAQYSLPWSVACALGRGTVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERW
CCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH
ARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRALAEPVLGERAARLQDVVMSLE
HHHHEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TRPASDLLALLGAP
CCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]