| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yxeQ [H]
Identifier: 92114478
GI number: 92114478
Start: 2648943
End: 2650247
Strand: Direct
Name: yxeQ [H]
Synonym: Csal_2358
Alternate gene names: 92114478
Gene position: 2648943-2650247 (Clockwise)
Preceding gene: 92114477
Following gene: 92114479
Centisome position: 71.66
GC content: 71.65
Gene sequence:
>1305_bases ATGCACGACCACGCCCCCCTCGACTGGATGCACGGGGTCGATCTCTCCGCCCTGGACGACGCCCACCTCCACCAGGCCAA GCGCTGCCTGCTCGACCTGCTGGGCGTGGCCGCCGGCGCCACCCGCACGCCGCTGGCCGACAAGGCCACGCGCTTCGTGA CCTCCCAGCATGGCGGCGACCGCCCGCTGCTGTTCACCGCCGGAAAGGCCTCGCCCACCGGCGTCGCCCTGCACGGGGCC TGGCTGATCGACGCGCTCGACGCCCACGACGGCCAGGTGCTGACCAAGGGTCATGCCGGCGTGGCCCTGCTGCCCGGCTT GCTGGCGCTGCCCGAGGTGGCCGACCTCTCCGGGCGCGACTTCCTCGCCCTGCTCGCCTACGGCTACGAGATCGCCACCC GCGCGGGGATCGCCCTGCACGCCACCAGCCCGGACTACCACACCTCCGGCGCCTGGAATGCCCTGGGAGTGGCCGCCGTG GCCGCGCGCCTGCGCGGAGCCGATGTCGAGACCCTGCATCATGCCCTCGGCATCGCCGAGTTCTATGGCCCGCGCAGCCA GATGATGCGCTGCATCGACCATCCCACGATGCTCAAGGACGGCTCCGGCTGGGGCGCGATGACCGGCATCTCCGCCGCCC TGCTGGCCGAGGACGGCTTCACCGGCGCCCCGGCGCTGACCGTGACCGCACCGGACGTAGCCGCGCTCTGGCAGGACCTG GGCGAGCGCTGGTATCTCCAAGAGCAGTACTTCAAGGCCTACCCGGTCTGCCGCTGGGCCCAGCCCGCGGTGGAAGCCGT GCTGTCACTGCCCGCCGAGCAACGCGCCCCCGCCGCCATCGCGCGCATCGAGATCGTCACCTTCCACGAGGGCAAGCGCC TGCATGTGACGCACCCGACCACCACCGAGCAGGCTCAGTACAGCCTGCCCTGGTCCGTCGCCTGCGCCCTGGGCCGAGGC ACCGTGGATGTCGCGGGCGTCAGCGACGAACTCGACGCCCCGGATCTCAAGGCCCTGGCCAGCCGGGTGGAGATTCACGA GGACGACACCTTCAACGCCCGCTTTCCCGCCGAGCGCTGGGCGCGCGCCCGTCTGCATCTGGAAAGCGGCGAGATCATCG AAAGTGCCGACTTCGAGGCGCGCGGCAATCACGATTGCCCGCTCTCGGACGACGAGGTCGTCGCCAAGTACCGGGCACTG GCCGAGCCCGTGCTGGGCGAGCGGGCAGCCCGGTTGCAGGACGTGGTGATGAGCCTCGAGACCCGCCCGGCAAGCGACCT GCTGGCGCTGCTCGGCGCGCCTTGA
Upstream 100 bases:
>100_bases CACGCGGAGCCAGGCTCCGCCGCCGACCGCGACGCGGGCCGTCTCATACCGGCCCCGTCTTTCGTCACGCCTTTCTTCGC CAGCACCCGAGGCCACTGCC
Downstream 100 bases:
>100_bases AGCAACGCCGCGCGGGTGGGATGATCCGCCTCGCCGGCGAGGCACGCGCCGGCATCTTTCAGACCCAGCGTAGCGAGACG CCACCATGCACTATCAGGAT
Product: MmgE/PrpD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL AEPVLGERAARLQDVVMSLETRPASDLLALLGAP
Sequences:
>Translated_434_residues MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL AEPVLGERAARLQDVVMSLETRPASDLLALLGAP >Mature_434_residues MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGDRPLLFTAGKASPTGVALHGA WLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRDFLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAV AARLRGADVETLHHALGIAEFYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPTTTEQAQYSLPWSVACALGRG TVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERWARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRAL AEPVLGERAARLQDVVMSLETRPASDLLALLGAP
Specific function: Unknown
COG id: COG2079
COG function: function code R; Uncharacterized protein involved in propionate catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prpD family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005656 [H]
Pfam domain/function: PF03972 MmgE_PrpD [H]
EC number: NA
Molecular weight: Translated: 46446; Mature: 46446
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGD CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC RPLLFTAGKASPTGVALHGAWLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRD CCEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHCCCCCH FLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAVAARLRGADVETLHHALGIAE HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH FYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL HHCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPT HHHEEHHHHHHHHCCCHHCCCHHHHHHHHCCCHHCCCCEEEEEEEEEEECCCEEEEECCC TTEQAQYSLPWSVACALGRGTVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERW CCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRALAEPVLGERAARLQDVVMSLE HHHHEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRPASDLLALLGAP CCCHHHHHHHHCCC >Mature Secondary Structure MHDHAPLDWMHGVDLSALDDAHLHQAKRCLLDLLGVAAGATRTPLADKATRFVTSQHGGD CCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCC RPLLFTAGKASPTGVALHGAWLIDALDAHDGQVLTKGHAGVALLPGLLALPEVADLSGRD CCEEEECCCCCCCCEEEEEEEEEEECCCCCCEEEECCCCCHHHHHHHHHCCCHHCCCCCH FLALLAYGYEIATRAGIALHATSPDYHTSGAWNALGVAAVAARLRGADVETLHHALGIAE HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH FYGPRSQMMRCIDHPTMLKDGSGWGAMTGISAALLAEDGFTGAPALTVTAPDVAALWQDL HHCCHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHH GERWYLQEQYFKAYPVCRWAQPAVEAVLSLPAEQRAPAAIARIEIVTFHEGKRLHVTHPT HHHEEHHHHHHHHCCCHHCCCHHHHHHHHCCCHHCCCCEEEEEEEEEEECCCEEEEECCC TTEQAQYSLPWSVACALGRGTVDVAGVSDELDAPDLKALASRVEIHEDDTFNARFPAERW CCCCCEECCCHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHH ARARLHLESGEIIESADFEARGNHDCPLSDDEVVAKYRALAEPVLGERAARLQDVVMSLE HHHHEEECCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TRPASDLLALLGAP CCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]