| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is purH [H]
Identifier: 92114410
GI number: 92114410
Start: 2577253
End: 2578845
Strand: Direct
Name: purH [H]
Synonym: Csal_2289
Alternate gene names: 92114410
Gene position: 2577253-2578845 (Clockwise)
Preceding gene: 92114409
Following gene: 92114421
Centisome position: 69.72
GC content: 66.1
Gene sequence:
>1593_bases ATGGCCGAACACACTACCCCGTCGTCCGCCCGCCCCGTGCGCCGCGCATTGATCAGCGTGTCCGACAAGACCGGCATCGT GGAGTTCGCCCGCGAGCTGGCCGCGCGTGGCGTCGCGCTGCTGTCCACCGGCGGCACGTTCCGCCTGCTCAGCGAGCACG GTATCCCGGTGACGGAAGTCTCCCAACACACCGGTTTCCCGGAAATCATGGACGGCCGCGTCAAGACCCTGCACCCCAAG ATTCACGGCGGCATTCTCGGTCGTCGCGGGCAGGACGACGAGGTGATGGCCGCGCATGACATCGATGCCATCGACATGGT CGTGGTCAACCTCTACCCCTTCGCCGACACTGTGGCCCGCGAGGATTGCACGCTGGAAGAGGCCATCGAGAACATCGACA TCGGCGGCCCGACCATGGTGCGCGCCTGTGCCAAGAACCACGCCCACACCACGATCGTGGTCAACGCCGGCGACTACTCG CGCGTACTGGATGACATGAGCGCCCAGGGCGGCGCCGTCGGCCAGGCGCTGCGCTTCGACCTGGCGGTCAAGGCCTTCGA GCACACCGCCGGTTACGACGGCGCCATCGCCAACTATCTCGGTACCCTGGCGGAAGGCGGTGAAGCCAACTTCCCGCGCA CCTACAACGTGCAGTTCCACAAGAAGCAGGCCATGCGCTACGGCGAGAACCCGCACCAGCAGGCTGCGTTCTATGCCGAA GCCGATGCCGCGGAAGCCAGCGTAACCACTGCCCGGCAACGCCAGGGCAAGGCGCTTTCCTTCAACAACGTCGCCGATAC CGATGCTGCCTTCGAGTGCGTCAAGGCCTTCCGCGAGACGGCCTGCGTCATCGTCAAGCACGCCAACCCCTGTGGCGTCG CCGTCGCCGAGACCCCGCTCGCGGCCTACGAGCGCGCTTTCGCCACCGATCCCACCAGTGCGTTCGGCGGCATCATCGCC TTCAATCGTGCGCTCGATGCCGCCACGGCTCGCGCCATCGTCGATCGGCAGTTCGTCGAGGTCATCATCGCTCCGGGCAT CAGCGACGAGGCTGCCGACATCGTCGCCGAGAAGAAGAATGTCCGCCTGCTCGATGTCAGCGACCATTGGCCCGGGCAGC GTCGCCCCTCGCACGACTTCAAGCGCGTCACCGGCGGCTTGCTGGTGCAGGACCGTGACCTGGGCATGGTCGAGCGGGAG GAACTGCGCACCGTCACCGAGCGCGCGCCCAGCGAGCAGGAAATGAACGACCTCAGCTTCGCCTGGAAAGTCGCCAAGTA CGTCAAGTCCAATGCCATCGTCTACGCCAAGCAAGGGCAGACCATCGGGGTCGGTGCCGGTCAGATGAGCCGCGTCTATT CCGCCAAGATCGCGGGCATCAAGGCCGCCGACGAGCATCTGGAAGTGCCCGGCTCGGTGATGGCCTCGGATGCCTTCTTC CCGTTCCGCGACGGCATCGATGCCGCGGCCCAGGCCGGCATCACCGCCGTGATCCAGCCCGGCGGCTCCATGCGCGATCA GGAAGTGATCGATGCCGCCAACGAAGCCGGCATCGCCATGGTCTTCACCGGCATGCGTCACTTCCGGCACTGA
Upstream 100 bases:
>100_bases GAACTGATTTGATTCCGTCCCGGGGCGTCGCGTCAGCGACGCCCCGTTGCGTTTCGTCCGGCGCCCATCGCGCGCCCTCA CCTTGCAAGAGTGGAGCCCA
Downstream 100 bases:
>100_bases GACCGGACTGCGCGCCAACGTGAAAACGGCCCGCCCCGAATGGCATTCGGGGCGGGCCGTTGGCGTTACGAGTGATGGAT GTACCTCGCCGCCCCATGCA
Product: IMP cyclohydrolase / phosphoribosylaminoimidazolecarboxamide formyltransferase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MAEHTTPSSARPVRRALISVSDKTGIVEFARELAARGVALLSTGGTFRLLSEHGIPVTEVSQHTGFPEIMDGRVKTLHPK IHGGILGRRGQDDEVMAAHDIDAIDMVVVNLYPFADTVAREDCTLEEAIENIDIGGPTMVRACAKNHAHTTIVVNAGDYS RVLDDMSAQGGAVGQALRFDLAVKAFEHTAGYDGAIANYLGTLAEGGEANFPRTYNVQFHKKQAMRYGENPHQQAAFYAE ADAAEASVTTARQRQGKALSFNNVADTDAAFECVKAFRETACVIVKHANPCGVAVAETPLAAYERAFATDPTSAFGGIIA FNRALDAATARAIVDRQFVEVIIAPGISDEAADIVAEKKNVRLLDVSDHWPGQRRPSHDFKRVTGGLLVQDRDLGMVERE ELRTVTERAPSEQEMNDLSFAWKVAKYVKSNAIVYAKQGQTIGVGAGQMSRVYSAKIAGIKAADEHLEVPGSVMASDAFF PFRDGIDAAAQAGITAVIQPGGSMRDQEVIDAANEAGIAMVFTGMRHFRH
Sequences:
>Translated_530_residues MAEHTTPSSARPVRRALISVSDKTGIVEFARELAARGVALLSTGGTFRLLSEHGIPVTEVSQHTGFPEIMDGRVKTLHPK IHGGILGRRGQDDEVMAAHDIDAIDMVVVNLYPFADTVAREDCTLEEAIENIDIGGPTMVRACAKNHAHTTIVVNAGDYS RVLDDMSAQGGAVGQALRFDLAVKAFEHTAGYDGAIANYLGTLAEGGEANFPRTYNVQFHKKQAMRYGENPHQQAAFYAE ADAAEASVTTARQRQGKALSFNNVADTDAAFECVKAFRETACVIVKHANPCGVAVAETPLAAYERAFATDPTSAFGGIIA FNRALDAATARAIVDRQFVEVIIAPGISDEAADIVAEKKNVRLLDVSDHWPGQRRPSHDFKRVTGGLLVQDRDLGMVERE ELRTVTERAPSEQEMNDLSFAWKVAKYVKSNAIVYAKQGQTIGVGAGQMSRVYSAKIAGIKAADEHLEVPGSVMASDAFF PFRDGIDAAAQAGITAVIQPGGSMRDQEVIDAANEAGIAMVFTGMRHFRH >Mature_529_residues AEHTTPSSARPVRRALISVSDKTGIVEFARELAARGVALLSTGGTFRLLSEHGIPVTEVSQHTGFPEIMDGRVKTLHPKI HGGILGRRGQDDEVMAAHDIDAIDMVVVNLYPFADTVAREDCTLEEAIENIDIGGPTMVRACAKNHAHTTIVVNAGDYSR VLDDMSAQGGAVGQALRFDLAVKAFEHTAGYDGAIANYLGTLAEGGEANFPRTYNVQFHKKQAMRYGENPHQQAAFYAEA DAAEASVTTARQRQGKALSFNNVADTDAAFECVKAFRETACVIVKHANPCGVAVAETPLAAYERAFATDPTSAFGGIIAF NRALDAATARAIVDRQFVEVIIAPGISDEAADIVAEKKNVRLLDVSDHWPGQRRPSHDFKRVTGGLLVQDRDLGMVEREE LRTVTERAPSEQEMNDLSFAWKVAKYVKSNAIVYAKQGQTIGVGAGQMSRVYSAKIAGIKAADEHLEVPGSVMASDAFFP FRDGIDAAAQAGITAVIQPGGSMRDQEVIDAANEAGIAMVFTGMRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=485, Percent_Identity=39.3814432989691, Blast_Score=284, Evalue=1e-76, Organism=Escherichia coli, GI1790439, Length=527, Percent_Identity=71.3472485768501, Blast_Score=748, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=614, Percent_Identity=31.2703583061889, Blast_Score=259, Evalue=2e-69, Organism=Caenorhabditis elegans, GI71985574, Length=353, Percent_Identity=28.0453257790368, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71985556, Length=152, Percent_Identity=32.8947368421053, Blast_Score=79, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6323056, Length=487, Percent_Identity=36.9609856262834, Blast_Score=284, Evalue=2e-77, Organism=Saccharomyces cerevisiae, GI6323768, Length=479, Percent_Identity=35.9081419624217, Blast_Score=270, Evalue=3e-73, Organism=Drosophila melanogaster, GI24649832, Length=506, Percent_Identity=37.7470355731225, Blast_Score=274, Evalue=1e-73,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 57009; Mature: 56878
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEHTTPSSARPVRRALISVSDKTGIVEFARELAARGVALLSTGGTFRLLSEHGIPVTEV CCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCEEEHHHCCCCHHHH SQHTGFPEIMDGRVKTLHPKIHGGILGRRGQDDEVMAAHDIDAIDMVVVNLYPFADTVAR HHHCCCHHHHCCCCEEECCHHHCCCCCCCCCCCCEEEECCCCHHEEEEEEHCCCHHHHHH EDCTLEEAIENIDIGGPTMVRACAKNHAHTTIVVNAGDYSRVLDDMSAQGGAVGQALRFD CCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHH LAVKAFEHTAGYDGAIANYLGTLAEGGEANFPRTYNVQFHKKQAMRYGENPHQQAAFYAE HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHEEEC ADAAEASVTTARQRQGKALSFNNVADTDAAFECVKAFRETACVIVKHANPCGVAVAETPL CCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCH AAYERAFATDPTSAFGGIIAFNRALDAATARAIVDRQFVEVIIAPGISDEAADIVAEKKN HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCC VRLLDVSDHWPGQRRPSHDFKRVTGGLLVQDRDLGMVEREELRTVTERAPSEQEMNDLSF EEEEEECCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHH AWKVAKYVKSNAIVYAKQGQTIGVGAGQMSRVYSAKIAGIKAADEHLEVPGSVMASDAFF HHHHHHHHHCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEECHHHHCCCCCHHCCCCCC PFRDGIDAAAQAGITAVIQPGGSMRDQEVIDAANEAGIAMVFTGMRHFRH CCCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEHEEHHHHHHCC >Mature Secondary Structure AEHTTPSSARPVRRALISVSDKTGIVEFARELAARGVALLSTGGTFRLLSEHGIPVTEV CCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCCEEEHHHCCCCHHHH SQHTGFPEIMDGRVKTLHPKIHGGILGRRGQDDEVMAAHDIDAIDMVVVNLYPFADTVAR HHHCCCHHHHCCCCEEECCHHHCCCCCCCCCCCCEEEECCCCHHEEEEEEHCCCHHHHHH EDCTLEEAIENIDIGGPTMVRACAKNHAHTTIVVNAGDYSRVLDDMSAQGGAVGQALRFD CCCCHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHHHHH LAVKAFEHTAGYDGAIANYLGTLAEGGEANFPRTYNVQFHKKQAMRYGENPHQQAAFYAE HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHHHCCCCHHHHHHEEEC ADAAEASVTTARQRQGKALSFNNVADTDAAFECVKAFRETACVIVKHANPCGVAVAETPL CCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCEEEEEECCCCCCEEEECCCH AAYERAFATDPTSAFGGIIAFNRALDAATARAIVDRQFVEVIIAPGISDEAADIVAEKKN HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHCCCC VRLLDVSDHWPGQRRPSHDFKRVTGGLLVQDRDLGMVEREELRTVTERAPSEQEMNDLSF EEEEEECCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHH AWKVAKYVKSNAIVYAKQGQTIGVGAGQMSRVYSAKIAGIKAADEHLEVPGSVMASDAFF HHHHHHHHHCCEEEEEECCCEEEECCCHHHHHHHHHHCCCEECHHHHCCCCCHHCCCCCC PFRDGIDAAAQAGITAVIQPGGSMRDQEVIDAANEAGIAMVFTGMRHFRH CCCCCCHHHHHCCCEEEECCCCCCCHHHHHHHHCCCCEEHEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA