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The map label for this gene is fis [C]

Identifier: 92114409

GI number: 92114409

Start: 2576865

End: 2577164

Strand: Direct

Name: fis [C]

Synonym: Csal_2288

Alternate gene names: 92114409

Gene position: 2576865-2577164 (Clockwise)

Preceding gene: 92114408

Following gene: 92114410

Centisome position: 69.71

GC content: 61.0

Gene sequence:

>300_bases
ATGACCAGCAGGCAAGCATTCCCCATCGATCAGAATACGCTCGATGCCGGCGCCACCACCTCGCCAGCGCATCAGCAAAC
CCTGCGTGAGTCGGTCGAGCTCGCCATGCAGCGCTACTTCGGCCACCTGGATGGCGAAACGGTGACCGATCTCTACGCCA
TGGTGCTGACCGAGGTCGAGGTCCCCTTGCTCGAGGCAGTGATGCGCTACGCCGATGGCAATCAGACCCGCGCGGCCGAC
ATGCTGGGTCTCAATCGCGGCACCCTGCGCAAGAAACTCAAGCAATACGAACTGATTTGA

Upstream 100 bases:

>100_bases
CACGCTTCAACGTACTGGAACAGCCCTCGGCCCAACACCGTTTCGTGGATGCCTTGGCCCACGACACGCTGGAACTGGCC
TCAACTGGAAGCAATGCAGC

Downstream 100 bases:

>100_bases
TTCCGTCCCGGGGCGTCGCGTCAGCGACGCCCCGTTGCGTTTCGTCCGGCGCCCATCGCGCGCCCTCACCTTGCAAGAGT
GGAGCCCAATGGCCGAACAC

Product: DNA-binding protein Fis

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MTSRQAFPIDQNTLDAGATTSPAHQQTLRESVELAMQRYFGHLDGETVTDLYAMVLTEVEVPLLEAVMRYADGNQTRAAD
MLGLNRGTLRKKLKQYELI

Sequences:

>Translated_99_residues
MTSRQAFPIDQNTLDAGATTSPAHQQTLRESVELAMQRYFGHLDGETVTDLYAMVLTEVEVPLLEAVMRYADGNQTRAAD
MLGLNRGTLRKKLKQYELI
>Mature_98_residues
TSRQAFPIDQNTLDAGATTSPAHQQTLRESVELAMQRYFGHLDGETVTDLYAMVLTEVEVPLLEAVMRYADGNQTRAADM
LGLNRGTLRKKLKQYELI

Specific function: Activates Ribosomal RNA Transcription. Plays A Direct Role In Upstream Activation Of rRNA Promoters. Binds To A Recombinational Enhancer Sequence That Is Required To Stimulate Hin-Mediated DNA Inversion. Prevents Initiation Of DNA Replication From Oric.

COG id: COG2901

COG function: function code KL; Factor for inversion stimulation Fis, transcriptional activator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory fis family [H]

Homologues:

Organism=Escherichia coli, GI1789661, Length=72, Percent_Identity=62.5, Blast_Score=97, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005412
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197 [H]

Pfam domain/function: PF02954 HTH_8 [H]

EC number: NA

Molecular weight: Translated: 11116; Mature: 10985

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRQAFPIDQNTLDAGATTSPAHQQTLRESVELAMQRYFGHLDGETVTDLYAMVLTEVE
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VPLLEAVMRYADGNQTRAADMLGLNRGTLRKKLKQYELI
HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSRQAFPIDQNTLDAGATTSPAHQQTLRESVELAMQRYFGHLDGETVTDLYAMVLTEVE
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCC
VPLLEAVMRYADGNQTRAADMLGLNRGTLRKKLKQYELI
HHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]