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The map label for this gene is yraN [C]

Identifier: 92114323

GI number: 92114323

Start: 2478881

End: 2479252

Strand: Direct

Name: yraN [C]

Synonym: Csal_2201

Alternate gene names: 92114323

Gene position: 2478881-2479252 (Clockwise)

Preceding gene: 92114322

Following gene: 92114324

Centisome position: 67.06

GC content: 63.17

Gene sequence:

>372_bases
ATGTCCAACTCGAACAATGACTCACGCCGGCGCGGCCTCGAAATGGAGCGCCGTGCCGCGGACTGGCTGGCGTCACACGG
GCTGCGCCTGGTGGACGCCAATCAGCATGCACGTCGCGGCGAAATCGACCTGATCATGCGTGACGGGGACACCCTCGTCT
TCATCGAGGTCCGGCATCGTCGCGATGCTCGACATGGACACCCCTTCGAGACGGTCACCGCCGCCAAGCAGCGCCGCCTG
ATCGGCGCGGCACGTTTTTATCTCCATCGCAACGGGCTATCATGTGCGTGTCGTTTCGACGTCGTCGGCGTCACCGGCAC
GCCACCCCATCTGTCGTTCGAGTGGATTCGTTCGGCATTCGACGCCTTTTGA

Upstream 100 bases:

>100_bases
CGAGACGACGGTCGCATCCAGCGCACCCTGCCGTGGGCGCAGTTCCAGTCGGGCATACCGGCCCCCCTGCTGAACACCGG
CTCCGGTCTCGAGATCGGCA

Downstream 100 bases:

>100_bases
CCCAAGCAAGGCCTACTCATGGATTTCCAATCACGCATACTCGGCCACTTCAACGCCAGCATCGATGCCAAGACCTATGC
CAGCGAGGTTCTGCCTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSNSNNDSRRRGLEMERRAADWLASHGLRLVDANQHARRGEIDLIMRDGDTLVFIEVRHRRDARHGHPFETVTAAKQRRL
IGAARFYLHRNGLSCACRFDVVGVTGTPPHLSFEWIRSAFDAF

Sequences:

>Translated_123_residues
MSNSNNDSRRRGLEMERRAADWLASHGLRLVDANQHARRGEIDLIMRDGDTLVFIEVRHRRDARHGHPFETVTAAKQRRL
IGAARFYLHRNGLSCACRFDVVGVTGTPPHLSFEWIRSAFDAF
>Mature_122_residues
SNSNNDSRRRGLEMERRAADWLASHGLRLVDANQHARRGEIDLIMRDGDTLVFIEVRHRRDARHGHPFETVTAAKQRRLI
GAARFYLHRNGLSCACRFDVVGVTGTPPHLSFEWIRSAFDAF

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=117, Percent_Identity=45.2991452991453, Blast_Score=94, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2201_CHRSD (Q1QVF6)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_574251.1
- STRING:   Q1QVF6
- GeneID:   4026393
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_2201
- NMPDR:   fig|290398.4.peg.2869
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   QWLKNAF
- ProtClustDB:   CLSK2777485
- BioCyc:   CSAL290398:CSAL_2201-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14112; Mature: 13981

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSNNDSRRRGLEMERRAADWLASHGLRLVDANQHARRGEIDLIMRDGDTLVFIEVRHR
CCCCCCCHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCEEEEEEEECC
RDARHGHPFETVTAAKQRRLIGAARFYLHRNGLSCACRFDVVGVTGTPPHLSFEWIRSAF
CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHH
DAF
HCC
>Mature Secondary Structure 
SNSNNDSRRRGLEMERRAADWLASHGLRLVDANQHARRGEIDLIMRDGDTLVFIEVRHR
CCCCCCHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEECCCEEEEEEEECC
RDARHGHPFETVTAAKQRRLIGAARFYLHRNGLSCACRFDVVGVTGTPPHLSFEWIRSAF
CCCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHH
DAF
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA