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The map label for this gene is ybaV [C]

Identifier: 92114278

GI number: 92114278

Start: 2425762

End: 2426034

Strand: Direct

Name: ybaV [C]

Synonym: Csal_2156

Alternate gene names: 92114278

Gene position: 2425762-2426034 (Clockwise)

Preceding gene: 92114276

Following gene: 92114280

Centisome position: 65.62

GC content: 64.84

Gene sequence:

>273_bases
ATGAAGTATCTGCTCAGCTGTACCCTGCTGGCGCTCTCACTGAGTGCCGCTCCGCTGGCCCTGGCGCAGGAGAACGCGCC
GCAGGCCATCGACATCAACCATGCCACCGCCGAGACTCTGGCCGAATTGCCGGGCATCGGCGAGGTCAAGGCACAGGCCA
TCGTCGAGGATCGTGAAGCCAACGGGCCGTTTGCGTCTCTCGAGGACCTGACCCGCGTCAGCGGCATCGGCGAGGGAACC
GTGCACGACCTGGAGAACCGCGTGACCTTCTGA

Upstream 100 bases:

>100_bases
TTTCACCTACACGTTTTGTAAGCAAAGGCTTACACGCCGTGTGCGCGGAACTGGATAGGGTAAAGCGGCATGTATTAGAA
ATGATGCAAGGGAGGTTTCG

Downstream 100 bases:

>100_bases
TCGCACCGACGGTCCGGCATGCCCGCGCGCCGATGCGCGGGCCATGTCGCACTCCCTGCCCCGGCTCGCCGGACACCAGG
CCCTAGACCCTCAGACCACC

Product: competence protein ComEA helix-hairpin-helix region

Products: NA

Alternate protein names: Competence Protein ComEA Helix-Hairpin-Helix Region

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKYLLSCTLLALSLSAAPLALAQENAPQAIDINHATAETLAELPGIGEVKAQAIVEDREANGPFASLEDLTRVSGIGEGT
VHDLENRVTF

Sequences:

>Translated_90_residues
MKYLLSCTLLALSLSAAPLALAQENAPQAIDINHATAETLAELPGIGEVKAQAIVEDREANGPFASLEDLTRVSGIGEGT
VHDLENRVTF
>Mature_90_residues
MKYLLSCTLLALSLSAAPLALAQENAPQAIDINHATAETLAELPGIGEVKAQAIVEDREANGPFASLEDLTRVSGIGEGT
VHDLENRVTF

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9473; Mature: 9473

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLLSCTLLALSLSAAPLALAQENAPQAIDINHATAETLAELPGIGEVKAQAIVEDREA
CCHHHHHHHHHHHHCCCCHHHCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCCC
NGPFASLEDLTRVSGIGEGTVHDLENRVTF
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MKYLLSCTLLALSLSAAPLALAQENAPQAIDINHATAETLAELPGIGEVKAQAIVEDREA
CCHHHHHHHHHHHHCCCCHHHCCCCCCCEEECCHHHHHHHHHCCCCCCHHHHHHHHCCCC
NGPFASLEDLTRVSGIGEGTVHDLENRVTF
CCCCCCHHHHHHHHCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA