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The map label for this gene is yciM [H]

Identifier: 92114276

GI number: 92114276

Start: 2423631

End: 2424815

Strand: Direct

Name: yciM [H]

Synonym: Csal_2154

Alternate gene names: 92114276

Gene position: 2423631-2424815 (Clockwise)

Preceding gene: 92114275

Following gene: 92114278

Centisome position: 65.56

GC content: 64.73

Gene sequence:

>1185_bases
ATGCTTGATCCACTGCTGCTTGGCCTGCTGGTCGCGGCGATTGCCATCGGTTGGTGGCTGGGACGGCGCGAGCGCCGGCG
CGCTCGCGAACAACCCGCTCCCGGCGTGTCCCTGCCCCGGGACTATTTCATCGGCCTCAACCACTTGCTCAATGAGCAGC
CGGATCGTGCCATCGAGACGTTCGTGCAAGCGCTCGAGGTCAACAGCGACACCATCGAAACCCATATCGCGCTGGGCAAT
CTGTTCCGCTCTCGCGGCGAAGCCGATCGTGCCGTCAAGATTCATCAGAACCTCCTGGCCCGCCCTACCCTGACCCCCCA
TCAGGGCGGCCTGGTGCAGCTGGAACTCTCGCGCGACTTCCTCCACCTCGGCTTGCTCGACCGCGCCGAACGCTTGCTGC
AGAGCCTCGTCAAGGACGTCCCCGATGAAGGCCTTCGCGATGCCGCCAAGCGCTTGCTGGTCGACCTCCTGCAGCGCGAG
AAGGAATGGCAGCAGGCGCTGGATGTCGCCACGCCGCAGCTCGTCCGCCAGGACGCGGACATCCAGCGCGCCGCAGCGCA
CTGGCTATGCGAACTCGCCCAGCGCGACCGGCACAATGCCAGCCCCGGCATGGCACGCAAGCGCCTGCGCCAGGCCCTGT
CGATCGACGAAAGCTGCGTACGGGCCACTTGGCTGCTGGCCGAGTTGGAACGGGATACCGGCCACTACAAGGCCGTGATT
CGCCATCTCAAGCGCATCCCCGAGCAGGACCCGGGCTTTCTGCCGGTCATCCTCGAGCCCTTGCATGAGGCCTATCGACG
CCTGGAAGACGAGTCGGGCTGGCGCGCATTTCTCGAGACCAAGCTGCAGGAAACGCACTTCACCAGCGTCGTGATCATGC
TCGCGGCGTCCCGACTCAATACCGAAGGCCAGGACGCGGCCATCGAATTGATCAGCGAACAGCTCCAAGCGCACCCCAGC
CTGCGCGGCGTCGATTACCTCATGGACCTGTACCTGATCGGCGAAAATCACGGCGACCGCGAACGCCTGCTGCTGCTCAA
GCAACATACTCAGAAACTGCTGGCAGCACGCCCCCGTCATCGCTGTCATCGCTGTGGCTTCGGCAGCGCACAACTGCATT
GGCAATGCCCGCGCTGCCAGAGCTGGGGCACCACCAAGCCGATCACGGGACTGGAAGGCGAGTAG

Upstream 100 bases:

>100_bases
GCGTCTGCGGACCCTGTTGACCCGCGCGCAACGCCATAACCAACAGCAGCGCAAGGAACTGGATCGGCTTCGCACCCAGG
AGTTCAAGGAAGCGCCCTGA

Downstream 100 bases:

>100_bases
CCGCGTCCTTACGACGGCTCCGCAAGCTCGCGTTCGATGGTCGCCAGCGCCGCCATCGGATCCGGCGCCTGCGTGACCGG
GCGTCCCACCACCAGATGCG

Product: tetratricopeptide repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MLDPLLLGLLVAAIAIGWWLGRRERRRAREQPAPGVSLPRDYFIGLNHLLNEQPDRAIETFVQALEVNSDTIETHIALGN
LFRSRGEADRAVKIHQNLLARPTLTPHQGGLVQLELSRDFLHLGLLDRAERLLQSLVKDVPDEGLRDAAKRLLVDLLQRE
KEWQQALDVATPQLVRQDADIQRAAAHWLCELAQRDRHNASPGMARKRLRQALSIDESCVRATWLLAELERDTGHYKAVI
RHLKRIPEQDPGFLPVILEPLHEAYRRLEDESGWRAFLETKLQETHFTSVVIMLAASRLNTEGQDAAIELISEQLQAHPS
LRGVDYLMDLYLIGENHGDRERLLLLKQHTQKLLAARPRHRCHRCGFGSAQLHWQCPRCQSWGTTKPITGLEGE

Sequences:

>Translated_394_residues
MLDPLLLGLLVAAIAIGWWLGRRERRRAREQPAPGVSLPRDYFIGLNHLLNEQPDRAIETFVQALEVNSDTIETHIALGN
LFRSRGEADRAVKIHQNLLARPTLTPHQGGLVQLELSRDFLHLGLLDRAERLLQSLVKDVPDEGLRDAAKRLLVDLLQRE
KEWQQALDVATPQLVRQDADIQRAAAHWLCELAQRDRHNASPGMARKRLRQALSIDESCVRATWLLAELERDTGHYKAVI
RHLKRIPEQDPGFLPVILEPLHEAYRRLEDESGWRAFLETKLQETHFTSVVIMLAASRLNTEGQDAAIELISEQLQAHPS
LRGVDYLMDLYLIGENHGDRERLLLLKQHTQKLLAARPRHRCHRCGFGSAQLHWQCPRCQSWGTTKPITGLEGE
>Mature_394_residues
MLDPLLLGLLVAAIAIGWWLGRRERRRAREQPAPGVSLPRDYFIGLNHLLNEQPDRAIETFVQALEVNSDTIETHIALGN
LFRSRGEADRAVKIHQNLLARPTLTPHQGGLVQLELSRDFLHLGLLDRAERLLQSLVKDVPDEGLRDAAKRLLVDLLQRE
KEWQQALDVATPQLVRQDADIQRAAAHWLCELAQRDRHNASPGMARKRLRQALSIDESCVRATWLLAELERDTGHYKAVI
RHLKRIPEQDPGFLPVILEPLHEAYRRLEDESGWRAFLETKLQETHFTSVVIMLAASRLNTEGQDAAIELISEQLQAHPS
LRGVDYLMDLYLIGENHGDRERLLLLKQHTQKLLAARPRHRCHRCGFGSAQLHWQCPRCQSWGTTKPITGLEGE

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=385, Percent_Identity=36.3636363636364, Blast_Score=249, Evalue=3e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44949; Mature: 44949

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDPLLLGLLVAAIAIGWWLGRRERRRAREQPAPGVSLPRDYFIGLNHLLNEQPDRAIET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
FVQALEVNSDTIETHIALGNLFRSRGEADRAVKIHQNLLARPTLTPHQGGLVQLELSRDF
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHH
LHLGLLDRAERLLQSLVKDVPDEGLRDAAKRLLVDLLQREKEWQQALDVATPQLVRQDAD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
IQRAAAHWLCELAQRDRHNASPGMARKRLRQALSIDESCVRATWLLAELERDTGHYKAVI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
RHLKRIPEQDPGFLPVILEPLHEAYRRLEDESGWRAFLETKLQETHFTSVVIMLAASRLN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGQDAAIELISEQLQAHPSLRGVDYLMDLYLIGENHGDRERLLLLKQHTQKLLAARPRH
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHH
RCHRCGFGSAQLHWQCPRCQSWGTTKPITGLEGE
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLDPLLLGLLVAAIAIGWWLGRRERRRAREQPAPGVSLPRDYFIGLNHLLNEQPDRAIET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHH
FVQALEVNSDTIETHIALGNLFRSRGEADRAVKIHQNLLARPTLTPHQGGLVQLELSRDF
HHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHH
LHLGLLDRAERLLQSLVKDVPDEGLRDAAKRLLVDLLQREKEWQQALDVATPQLVRQDAD
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCH
IQRAAAHWLCELAQRDRHNASPGMARKRLRQALSIDESCVRATWLLAELERDTGHYKAVI
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHH
RHLKRIPEQDPGFLPVILEPLHEAYRRLEDESGWRAFLETKLQETHFTSVVIMLAASRLN
HHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TEGQDAAIELISEQLQAHPSLRGVDYLMDLYLIGENHGDRERLLLLKQHTQKLLAARPRH
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCHHH
RCHRCGFGSAQLHWQCPRCQSWGTTKPITGLEGE
HHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]