Click here to switch to the map view.

The map label for this gene is metQ [H]

Identifier: 92114224

GI number: 92114224

Start: 2370500

End: 2371327

Strand: Direct

Name: metQ [H]

Synonym: Csal_2102

Alternate gene names: 92114224

Gene position: 2370500-2371327 (Clockwise)

Preceding gene: 92114223

Following gene: 92114225

Centisome position: 64.13

GC content: 63.29

Gene sequence:

>828_bases
ATGAACACCCCTCTGGCTCACGTTCTACGCCCCGCGCGTCTGCTCGGCGCCGCGGCACTGCTGGGTGCCGGCCTGATCGC
CGGCTGCGGCGGTGACGATGCCGAGACGCAGTCGATCAAGGTAGGCACCGTGGCCGGCCCGGAAACGGACGTCATGCAAG
TCGCCAAGCAGATCGCCAAGGACGAATACGGCCTCGACGTCGAGATCGTCGAGTTCACCGACTACGTCTCGCCCAACGCC
GCACTGGCCGATGGCAGCCTGGACGCCAACGCGTTTCAGCATGAGCCCTATCTGAACAGCATGGTCGAGGATCGCGGCTA
CGACTTCGCCATCGCCGGCAAGACCTTCGTCTACCCGATCGGCGCCTACTCCGAGCGCTACGACGACATCGCCGACCTCC
CGGATGGTGCGAGCATAGCGCTGCCCAACGACCCGTCCAACGAGGGGCGTTCGCTGATCCTGATGCACAACGAGGGCCTC
ATCGAGCTCAACGACCCCGAGAATCTCGAAGCCACGCCGATCGACATCAGCAACAACCCGCATGACTATGAGTTCCGCGA
GATCGAAGCCGCGCAATTGCCGCGCGTGCTGCCCGATGTCGACCTGGCATTCATCAACAACACCTTCGCGCAGCCGGCGG
GCCTCAGCCTCGATGACGCGCTGATCAAGGAAGGTCCCGAATCGCCTTACGTCAACCTGATCGTGACGCGCGAAGGCAAG
CAGGATGACGAGGCGATCCAGAACCTGGTCAAGGCCTACCAGTCGCAAGCAGTCATCGACAAGGCCGACGAACTGTTCAA
GGGCGCCGCGGTTCCCGGCTGGAAGTAA

Upstream 100 bases:

>100_bases
GCTATAATAGGCGCGTCTTTTATACTCAAAAAAGCATAAATGCTTTCGGGAGCCGGCCCTCCCCGCCGGCGAGACCACCT
CGTTCAAGGAGAAACATACG

Downstream 100 bases:

>100_bases
CCTCCGCTCTGTCCTCGCAACTCACAGGCCGGCCTCGCGAGGCCGGCCTGTTTCGTTACCCCTCGCAAACCTCGCTCCGG
AGACACCATGAGTGACTACG

Product: lipoprotein YaeC

Products: NA

Alternate protein names: Outer membrane lipoprotein 1 [H]

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MNTPLAHVLRPARLLGAAALLGAGLIAGCGGDDAETQSIKVGTVAGPETDVMQVAKQIAKDEYGLDVEIVEFTDYVSPNA
ALADGSLDANAFQHEPYLNSMVEDRGYDFAIAGKTFVYPIGAYSERYDDIADLPDGASIALPNDPSNEGRSLILMHNEGL
IELNDPENLEATPIDISNNPHDYEFREIEAAQLPRVLPDVDLAFINNTFAQPAGLSLDDALIKEGPESPYVNLIVTREGK
QDDEAIQNLVKAYQSQAVIDKADELFKGAAVPGWK

Sequences:

>Translated_275_residues
MNTPLAHVLRPARLLGAAALLGAGLIAGCGGDDAETQSIKVGTVAGPETDVMQVAKQIAKDEYGLDVEIVEFTDYVSPNA
ALADGSLDANAFQHEPYLNSMVEDRGYDFAIAGKTFVYPIGAYSERYDDIADLPDGASIALPNDPSNEGRSLILMHNEGL
IELNDPENLEATPIDISNNPHDYEFREIEAAQLPRVLPDVDLAFINNTFAQPAGLSLDDALIKEGPESPYVNLIVTREGK
QDDEAIQNLVKAYQSQAVIDKADELFKGAAVPGWK
>Mature_275_residues
MNTPLAHVLRPARLLGAAALLGAGLIAGCGGDDAETQSIKVGTVAGPETDVMQVAKQIAKDEYGLDVEIVEFTDYVSPNA
ALADGSLDANAFQHEPYLNSMVEDRGYDFAIAGKTFVYPIGAYSERYDDIADLPDGASIALPNDPSNEGRSLILMHNEGL
IELNDPENLEATPIDISNNPHDYEFREIEAAQLPRVLPDVDLAFINNTFAQPAGLSLDDALIKEGPESPYVNLIVTREGK
QDDEAIQNLVKAYQSQAVIDKADELFKGAAVPGWK

Specific function: This protein is a component of a D-methionine permease, a binding protein-dependent, ATP-driven transport system [H]

COG id: COG1464

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpA lipoprotein family [H]

Homologues:

Organism=Escherichia coli, GI1786396, Length=259, Percent_Identity=49.4208494208494, Blast_Score=258, Evalue=3e-70,
Organism=Escherichia coli, GI1790093, Length=249, Percent_Identity=43.7751004016064, Blast_Score=226, Evalue=2e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004872
- InterPro:   IPR004478 [H]

Pfam domain/function: PF03180 Lipoprotein_9 [H]

EC number: NA

Molecular weight: Translated: 29584; Mature: 29584

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTPLAHVLRPARLLGAAALLGAGLIAGCGGDDAETQSIKVGTVAGPETDVMQVAKQIAK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
DEYGLDVEIVEFTDYVSPNAALADGSLDANAFQHEPYLNSMVEDRGYDFAIAGKTFVYPI
HHCCCCEEEEEEECCCCCCCEEECCCCCCCHHHCCHHHHHHHHHCCCEEEEECCEEEEEC
GAYSERYDDIADLPDGASIALPNDPSNEGRSLILMHNEGLIELNDPENLEATPIDISNNP
CCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEECCCCC
HDYEFREIEAAQLPRVLPDVDLAFINNTFAQPAGLSLDDALIKEGPESPYVNLIVTREGK
CCCHHHHCCHHHCCCCCCCCCEEEHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCC
QDDEAIQNLVKAYQSQAVIDKADELFKGAAVPGWK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTPLAHVLRPARLLGAAALLGAGLIAGCGGDDAETQSIKVGTVAGPETDVMQVAKQIAK
CCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHH
DEYGLDVEIVEFTDYVSPNAALADGSLDANAFQHEPYLNSMVEDRGYDFAIAGKTFVYPI
HHCCCCEEEEEEECCCCCCCEEECCCCCCCHHHCCHHHHHHHHHCCCEEEEECCEEEEEC
GAYSERYDDIADLPDGASIALPNDPSNEGRSLILMHNEGLIELNDPENLEATPIDISNNP
CCHHHHHHHHHCCCCCCEEECCCCCCCCCCEEEEEECCCEEEECCCCCCCCCEEECCCCC
HDYEFREIEAAQLPRVLPDVDLAFINNTFAQPAGLSLDDALIKEGPESPYVNLIVTREGK
CCCHHHHCCHHHCCCCCCCCCEEEHHCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCC
QDDEAIQNLVKAYQSQAVIDKADELFKGAAVPGWK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]