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The map label for this gene is ytsP [H]

Identifier: 92114225

GI number: 92114225

Start: 2371415

End: 2371882

Strand: Direct

Name: ytsP [H]

Synonym: Csal_2103

Alternate gene names: 92114225

Gene position: 2371415-2371882 (Clockwise)

Preceding gene: 92114224

Following gene: 92114227

Centisome position: 64.15

GC content: 67.31

Gene sequence:

>468_bases
ATGAGTGACTACGCCCTGCTCGCCCGCCAGCTCGAAACGCTGCTGGACACTCGCGACTGGCTGACCAACACGGCGCAAAC
CTGTGCCTTCTTGATGCACGAAATTCCCGACCTCAACTGGGCCGGCTTTTACCTGCAACGCCAGCCCGGCACCCTGATCC
TCGGCCCCTTCCAGGGCTTGCCGGCCTGCAACCCCATCCCGTTCGACAAGGGCGTGTGTGGCGCCGCCGCGACGTCCCGC
CACACGCAGCGCGTCGCGGACGTCCACGCGTTTCCGGGACATATCGCCTGCGATGCCGCTTCGCGTTCGGAACTGGTGGT
TCCCATCGAGTGCGGCGCCGAGCTCTGGGGCGTGCTGGATCTGGATAGCCCGCAGCCGGCGCGCTTCAGCGACGCGGACC
AGGCCGGCATCGAGCGCCTGGTCGACGTGTTCGTTGCCGCCAGCGATCTGCCGACCCCGGAGGCATAA

Upstream 100 bases:

>100_bases
CGGCTGGAAGTAACCTCCGCTCTGTCCTCGCAACTCACAGGCCGGCCTCGCGAGGCCGGCCTGTTTCGTTACCCCTCGCA
AACCTCGCTCCGGAGACACC

Downstream 100 bases:

>100_bases
CGCAAAAACCCCCGATGCCTGGCATCGGGGGTTTTTGCTAAAACTGGTAGGACCGAGCGGATTTGAACCGCTGACCTCCA
CGATGTCAACGTGGCGCTCT

Product: putative GAF sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MSDYALLARQLETLLDTRDWLTNTAQTCAFLMHEIPDLNWAGFYLQRQPGTLILGPFQGLPACNPIPFDKGVCGAAATSR
HTQRVADVHAFPGHIACDAASRSELVVPIECGAELWGVLDLDSPQPARFSDADQAGIERLVDVFVAASDLPTPEA

Sequences:

>Translated_155_residues
MSDYALLARQLETLLDTRDWLTNTAQTCAFLMHEIPDLNWAGFYLQRQPGTLILGPFQGLPACNPIPFDKGVCGAAATSR
HTQRVADVHAFPGHIACDAASRSELVVPIECGAELWGVLDLDSPQPARFSDADQAGIERLVDVFVAASDLPTPEA
>Mature_154_residues
SDYALLARQLETLLDTRDWLTNTAQTCAFLMHEIPDLNWAGFYLQRQPGTLILGPFQGLPACNPIPFDKGVCGAAATSRH
TQRVADVHAFPGHIACDAASRSELVVPIECGAELWGVLDLDSPQPARFSDADQAGIERLVDVFVAASDLPTPEA

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=139, Percent_Identity=48.2014388489209, Blast_Score=134, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6322781, Length=129, Percent_Identity=43.4108527131783, Blast_Score=113, Evalue=1e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 16761; Mature: 16630

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDYALLARQLETLLDTRDWLTNTAQTCAFLMHEIPDLNWAGFYLQRQPGTLILGPFQGL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCC
PACNPIPFDKGVCGAAATSRHTQRVADVHAFPGHIACDAASRSELVVPIECGAELWGVLD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEEEE
LDSPQPARFSDADQAGIERLVDVFVAASDLPTPEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SDYALLARQLETLLDTRDWLTNTAQTCAFLMHEIPDLNWAGFYLQRQPGTLILGPFQGL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCC
PACNPIPFDKGVCGAAATSRHTQRVADVHAFPGHIACDAASRSELVVPIECGAELWGVLD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEEEE
LDSPQPARFSDADQAGIERLVDVFVAASDLPTPEA
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]