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The map label for this gene is 92114196

Identifier: 92114196

GI number: 92114196

Start: 2343089

End: 2344771

Strand: Direct

Name: 92114196

Synonym: Csal_2074

Alternate gene names: NA

Gene position: 2343089-2344771 (Clockwise)

Preceding gene: 92114193

Following gene: 92114197

Centisome position: 63.38

GC content: 65.3

Gene sequence:

>1683_bases
ATGTCCCAGCCACGCATCCAGGTTCGCGCCCGTCGAAAGCCTCCCCTGCATATGCTACCGCTCGGTGGTTGCGGTGAAAT
CGGCATGAATTTCACGCTTTACGGCCACCAGGATCATTGGATCGTCGTCGATTGCGGCATGATGATTCGCCAGGATCTCC
CGCAGGCACCGCTTCAGGTTCCCAACGTGGACATGCTGGCGTCGCAGAACATCGTTCCCCGGGCCATCGTCGTGACGCAC
GGGCATGAAGATCATATCGGCGCGATCGCCTGGCTCTGGCCCCGCTGGCAATGCCCCGTGCATGCCACGCCCCTCGCCGC
CGGCTTGCTGCGCCTGCGTTTTGCCGAGCAGCAATTGCCCACCAGCGCCATCCAGGTCATCACGCCCGGTGACGCCATGG
AAAGCGGGCCGTTCGACATTCGTTTCCTGCCGCTGCCGCACTCGATTCCCGAAAGCTGCGCGCTGCTGCTGACGACGCCC
CAGCACCGGATATTGCACACCGGCGACTGGAAGCTCGACCCCGAACCTCTGATCGGCAAGCCGGCATCCCCTCAACGCTT
CCAGGCGCTTGCCCCGGTCGATCTGGTGGTCGGCGACTCCACCAATGCCCCCGTTCCCGGTCACTCGCGCAGCGAGGGTG
AGGTCGCGCGCGCCCTGGAGACCACGATAGGCGCATGCCCGGGACGCGTGATCGTCAGCTGCTTTGCCAGCAATCTGGCG
CGAATCCTGGCGCTGGGACGCGCCGCGCATGCCTGCGGACGGCGCGTGAGCCTGATGGGACGCTCGATGGAACGCATGGT
GGGCGTCGCACGCGGGCTCGGCTACCTGGAGGACTTTCCGCCGCTGGTGCCGGTACGCGATCTCGGCTACCTGCCGCCCG
AGGAAGTGCTGGTCATCGCCACCGGCAGTCAGGGAGAACCCCGTGCCGCGCTTTCGCGGCTCGCGCAGGGGCGGCATGCC
GATTTCGAATTGCACCCCGGCGACAGCGTGATCTTTTCGGCCAAGGCAATCCCGGGCAACGAACTGCTCATCGAACGCCT
GCAGGCCGGCCTGAAGCGTGCCAAGGTCACGATTTTCGACGAACGCAGCCACCCCGAACTGCATGCCTCGGGACACCCCG
CACAAGCGGAATTGCGCCGTTTTTACGAATGGGTCAAGCCTCGACGCCTGCTGCCCGTGCATGGCGAGCAGCAACATCAA
CAGGCCCATCGTGCGCTGGCGGAATCGCTGGGCATCGAGGTGCCCTGGATTCCCCGCAACGGCGATATGCTACGTCTCGA
CGCCGAGGGCCTGCACTGCGAGTCACGCCACTCGCTGGCGCCGCACATCGTCACGCAGAACCGCATTCACCCCCTGGAAG
GACTGCGTGCTCCCGAGGCCTCGAGCATGCATCGACGCAGCGGGATTCTGAGCCTGACCCTGCCGGTCGTTCGCCAATCC
ACTGGATGGGTACGGATCGGACGACTGCTCTGGGATACCAGCCACGACCTGCCTCTGGACGACGTGGCTCTCGCCGACTG
GGTCGACGAGCAGCTCGCAGGCCACGACGCGGATACCATCGTCACCTTGCGCCAGCGCTTGCATGGCCCCTTGATGCACT
GGCTGGGCGACCATCTGCGCCACCTTCCCGACGTGCACCTGCACATCATGGCCGCGGAAGGCGATACCGTTTACGATGCC
TGA

Upstream 100 bases:

>100_bases
CGCCTATTGTAGCGGATTCATCACCGACAAGAAGCCTCGATTGTGGGCACGCCGACGCATCACGTATAGTAATGGGTCAT
GCCCACGATTAAGGATGACG

Downstream 100 bases:

>100_bases
CCCCTCATGAAAAAACGGACCCGAAGGTCCGTTTGCTCATGCAAGACGCCGGTTTACTGCTGGCGCTCTTTATCCTTCTT
CGGCGGACGACCGCGACGCT

Product: beta-lactamase-like protein

Products: NA

Alternate protein names: RNase J1 [H]

Number of amino acids: Translated: 560; Mature: 559

Protein sequence:

>560_residues
MSQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQVPNVDMLASQNIVPRAIVVTH
GHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLPTSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTP
QHRILHTGDWKLDPEPLIGKPASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLA
RILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIATGSQGEPRAALSRLAQGRHA
DFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFDERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQ
QAHRALAESLGIEVPWIPRNGDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQS
TGWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLRHLPDVHLHIMAAEGDTVYDA

Sequences:

>Translated_560_residues
MSQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQVPNVDMLASQNIVPRAIVVTH
GHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLPTSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTP
QHRILHTGDWKLDPEPLIGKPASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLA
RILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIATGSQGEPRAALSRLAQGRHA
DFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFDERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQ
QAHRALAESLGIEVPWIPRNGDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQS
TGWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLRHLPDVHLHIMAAEGDTVYDA
>Mature_559_residues
SQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQVPNVDMLASQNIVPRAIVVTHG
HEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLPTSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTPQ
HRILHTGDWKLDPEPLIGKPASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLAR
ILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIATGSQGEPRAALSRLAQGRHAD
FELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFDERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQQ
AHRALAESLGIEVPWIPRNGDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQST
GWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLRHLPDVHLHIMAAEGDTVYDA

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 61857; Mature: 61726

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQV
CCCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEECCHHHHHCCCCCCCCC
PNVDMLASQNIVPRAIVVTHGHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLP
CCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
TSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTPQHRILHTGDWKLDPEPLIGK
CCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLA
CCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCEEEEE
TGSQGEPRAALSRLAQGRHADFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFD
ECCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEE
ERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQQAHRALAESLGIEVPWIPRN
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEECCC
GDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQS
CCEEEEECCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHCCEEEEEEHHHHCC
TGWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLR
CCCEEECHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLPDVHLHIMAAEGDTVYDA
HCCCEEEEEEEECCCCCCCC
>Mature Secondary Structure 
SQPRIQVRARRKPPLHMLPLGGCGEIGMNFTLYGHQDHWIVVDCGMMIRQDLPQAPLQV
CCCCEEEEECCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEECCHHHHHCCCCCCCCC
PNVDMLASQNIVPRAIVVTHGHEDHIGAIAWLWPRWQCPVHATPLAAGLLRLRFAEQQLP
CCCHHHHCCCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCC
TSAIQVITPGDAMESGPFDIRFLPLPHSIPESCALLLTTPQHRILHTGDWKLDPEPLIGK
CCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCC
PASPQRFQALAPVDLVVGDSTNAPVPGHSRSEGEVARALETTIGACPGRVIVSCFASNLA
CCCCHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RILALGRAAHACGRRVSLMGRSMERMVGVARGLGYLEDFPPLVPVRDLGYLPPEEVLVIA
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHCCCCCCCCEEEEE
TGSQGEPRAALSRLAQGRHADFELHPGDSVIFSAKAIPGNELLIERLQAGLKRAKVTIFD
ECCCCCHHHHHHHHHCCCCCCEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHCEEEEEE
ERSHPELHASGHPAQAELRRFYEWVKPRRLLPVHGEQQHQQAHRALAESLGIEVPWIPRN
CCCCCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEECCC
GDMLRLDAEGLHCESRHSLAPHIVTQNRIHPLEGLRAPEASSMHRRSGILSLTLPVVRQS
CCEEEEECCCCCCCCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHCCEEEEEEHHHHCC
TGWVRIGRLLWDTSHDLPLDDVALADWVDEQLAGHDADTIVTLRQRLHGPLMHWLGDHLR
CCCEEECHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HLPDVHLHIMAAEGDTVYDA
HCCCEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA