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The map label for this gene is apeB [H]

Identifier: 92113644

GI number: 92113644

Start: 1731954

End: 1733252

Strand: Direct

Name: apeB [H]

Synonym: Csal_1520

Alternate gene names: 92113644

Gene position: 1731954-1733252 (Clockwise)

Preceding gene: 92113641

Following gene: 92113652

Centisome position: 46.85

GC content: 64.43

Gene sequence:

>1299_bases
ATGGCTCACGCCCCCACCCTTGACCGTTTACTGCATTTTCTCGAGCGCTCGCCCACACCCTGGCATGCCGTCGACAACAT
GGCTCGGCGGCTCGAACAGGCAGGGTATCGGCGACTCGAGGAAACCGAGGCGTGGCAATTGGCGCCCGGTGATCGTTTCT
ACGTCACGCGCAACGCGTCGTCATTGATTGCCATGCAGGTGCCGACGGACCCCTTGAGCGGGCTGCGCATGATCGGGGCG
CATACCGACAGCCCGGGGTTGCGGTTGAAACCCCAACCCGTGGTGGCCAAGAAGGATTGGCTGCAGTTGAGCGTCGAGGT
CTACGGCGGTGCGCTGCTGGCACCATGGTTCGACCGCGATCTGGGGCTGGCCGGGCGCATCCATGTACGACGCGAGGATG
GACGCTTGCAGGGCGTATTATTGCATGTCGATCGTCCCGTCGCGATCATTCCCAGCCTGGCCATCCACCTGGATCGCGAG
GCCAACAACGGGCGTGCCCTGAATGCCCAGACGCAGATGCTGCCGGTCGTGCTGCAAGGCGGTGGCGAAGCCGATCTCGA
GCGCTGGCTCAAGCGCTGGCTGTACGAACAGCATGGGCTGGAGAACATTCAGTTGTTGGATTACGAACTCTCGCTTTACG
ACATGCAGCGGCCGTCGCGTGTCGGGATCGAGGGGGAACTGATCGCCAGTGCGCGCCTCGACAATCTGCTGTCGTGCTTC
ACCGGTATCGAGGCCTTGCTGGCCGGCGACGGGCGACAGGGGGCGCTCTTCGTCGCCAACGATCACGAAGAAGTGGGCAG
TGCCAGTGCGTGCGGCGCCCAGGGCCCCTTCCTGGGAGACGTGCTGCGTCGCGTGCATGCGCAACTGGGTGAGGGCGGCG
AAGACGGCTGGGTGCGTCTGATCCAGGGCTCGCGCATGATTTCCTGCGACAACGCCCATGCCGTGCACCCCAACTTTCCC
GAGAAACACGACGAACACCACGGCCCGGCGATCAATGGCGGGCCCGTGATCAAGGTGAACGCCAACCAGCGCTATGCCAC
CAACAGCGCGACAGCGGCCATGTTCCGGGATATCTGTCGCGAGGCAGGAACGCCCGTGCAGACCTTCGTGACGCGTGCCG
ACATGGGCTGCGGCAGCACCATCGGGCCCATCACCGCCACCGAACTCGGGGTGCCGACGCTGGATGTGGGTATCCCGCAG
TGGGGCATGCACTCGATTCGCGAAACCGCCGGCAGCCGCGATGCCGATTACTTGATCCGCGCGCTGACGGCCTTCGTCAA
TCGCACCGAGCTGGACTAG

Upstream 100 bases:

>100_bases
AGGCCCTAGATTGCCGGCTCTTTGAGTTGAGTTTTCTCAGACCGGACTGGCATTGTAGCAGTCTGTATCATCCGTCACAG
ACACTTCTCCGAGGAACGCC

Downstream 100 bases:

>100_bases
CCGAAGAGAGCGGCGCCCGGCCGAGGACGGGCGCCCGGGGCAGTCTTGCCGGGCATTCCAGATGAAAAAAGCCCGTCGAC
ACAGGTGTCGACGGGCTTTT

Product: putative aminopeptidase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MAHAPTLDRLLHFLERSPTPWHAVDNMARRLEQAGYRRLEETEAWQLAPGDRFYVTRNASSLIAMQVPTDPLSGLRMIGA
HTDSPGLRLKPQPVVAKKDWLQLSVEVYGGALLAPWFDRDLGLAGRIHVRREDGRLQGVLLHVDRPVAIIPSLAIHLDRE
ANNGRALNAQTQMLPVVLQGGGEADLERWLKRWLYEQHGLENIQLLDYELSLYDMQRPSRVGIEGELIASARLDNLLSCF
TGIEALLAGDGRQGALFVANDHEEVGSASACGAQGPFLGDVLRRVHAQLGEGGEDGWVRLIQGSRMISCDNAHAVHPNFP
EKHDEHHGPAINGGPVIKVNANQRYATNSATAAMFRDICREAGTPVQTFVTRADMGCGSTIGPITATELGVPTLDVGIPQ
WGMHSIRETAGSRDADYLIRALTAFVNRTELD

Sequences:

>Translated_432_residues
MAHAPTLDRLLHFLERSPTPWHAVDNMARRLEQAGYRRLEETEAWQLAPGDRFYVTRNASSLIAMQVPTDPLSGLRMIGA
HTDSPGLRLKPQPVVAKKDWLQLSVEVYGGALLAPWFDRDLGLAGRIHVRREDGRLQGVLLHVDRPVAIIPSLAIHLDRE
ANNGRALNAQTQMLPVVLQGGGEADLERWLKRWLYEQHGLENIQLLDYELSLYDMQRPSRVGIEGELIASARLDNLLSCF
TGIEALLAGDGRQGALFVANDHEEVGSASACGAQGPFLGDVLRRVHAQLGEGGEDGWVRLIQGSRMISCDNAHAVHPNFP
EKHDEHHGPAINGGPVIKVNANQRYATNSATAAMFRDICREAGTPVQTFVTRADMGCGSTIGPITATELGVPTLDVGIPQ
WGMHSIRETAGSRDADYLIRALTAFVNRTELD
>Mature_431_residues
AHAPTLDRLLHFLERSPTPWHAVDNMARRLEQAGYRRLEETEAWQLAPGDRFYVTRNASSLIAMQVPTDPLSGLRMIGAH
TDSPGLRLKPQPVVAKKDWLQLSVEVYGGALLAPWFDRDLGLAGRIHVRREDGRLQGVLLHVDRPVAIIPSLAIHLDREA
NNGRALNAQTQMLPVVLQGGGEADLERWLKRWLYEQHGLENIQLLDYELSLYDMQRPSRVGIEGELIASARLDNLLSCFT
GIEALLAGDGRQGALFVANDHEEVGSASACGAQGPFLGDVLRRVHAQLGEGGEDGWVRLIQGSRMISCDNAHAVHPNFPE
KHDEHHGPAINGGPVIKVNANQRYATNSATAAMFRDICREAGTPVQTFVTRADMGCGSTIGPITATELGVPTLDVGIPQW
GMHSIRETAGSRDADYLIRALTAFVNRTELD

Specific function: Unknown

COG id: COG1362

COG function: function code E; Aspartyl aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M18 family [H]

Homologues:

Organism=Homo sapiens, GI156416028, Length=450, Percent_Identity=40.8888888888889, Blast_Score=310, Evalue=1e-84,
Organism=Caenorhabditis elegans, GI17552916, Length=446, Percent_Identity=38.1165919282511, Blast_Score=274, Evalue=7e-74,
Organism=Saccharomyces cerevisiae, GI6321905, Length=462, Percent_Identity=38.961038961039, Blast_Score=315, Evalue=7e-87,
Organism=Saccharomyces cerevisiae, GI6322746, Length=455, Percent_Identity=29.4505494505495, Blast_Score=186, Evalue=7e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022984
- InterPro:   IPR001948 [H]

Pfam domain/function: PF02127 Peptidase_M18 [H]

EC number: NA

Molecular weight: Translated: 47412; Mature: 47281

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS01319 RBFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHAPTLDRLLHFLERSPTPWHAVDNMARRLEQAGYRRLEETEAWQLAPGDRFYVTRNAS
CCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC
SLIAMQVPTDPLSGLRMIGAHTDSPGLRLKPQPVVAKKDWLQLSVEVYGGALLAPWFDRD
CEEEEECCCCCHHCCEEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCEEECCCCCCC
LGLAGRIHVRREDGRLQGVLLHVDRPVAIIPSLAIHLDREANNGRALNAQTQMLPVVLQG
CCCCEEEEEEECCCCEEEEEEECCCCHHHHCCEEEEEECCCCCCEEECCCHHEEEEEEEC
GGEADLERWLKRWLYEQHGLENIQLLDYELSLYDMQRPSRVGIEGELIASARLDNLLSCF
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHH
TGIEALLAGDGRQGALFVANDHEEVGSASACGAQGPFLGDVLRRVHAQLGEGGEDGWVRL
HHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
IQGSRMISCDNAHAVHPNFPEKHDEHHGPAINGGPVIKVNANQRYATNSATAAMFRDICR
ECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHH
EAGTPVQTFVTRADMGCGSTIGPITATELGVPTLDVGIPQWGMHSIRETAGSRDADYLIR
HCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHH
ALTAFVNRTELD
HHHHHHHHHCCC
>Mature Secondary Structure 
AHAPTLDRLLHFLERSPTPWHAVDNMARRLEQAGYRRLEETEAWQLAPGDRFYVTRNAS
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCC
SLIAMQVPTDPLSGLRMIGAHTDSPGLRLKPQPVVAKKDWLQLSVEVYGGALLAPWFDRD
CEEEEECCCCCHHCCEEEECCCCCCCCEECCCCCCCCCCCEEEEEEECCCEEECCCCCCC
LGLAGRIHVRREDGRLQGVLLHVDRPVAIIPSLAIHLDREANNGRALNAQTQMLPVVLQG
CCCCEEEEEEECCCCEEEEEEECCCCHHHHCCEEEEEECCCCCCEEECCCHHEEEEEEEC
GGEADLERWLKRWLYEQHGLENIQLLDYELSLYDMQRPSRVGIEGELIASARLDNLLSCF
CCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCCCCCCEEEHHHHHHHHHHHH
TGIEALLAGDGRQGALFVANDHEEVGSASACGAQGPFLGDVLRRVHAQLGEGGEDGWVRL
HHHHHHHCCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEE
IQGSRMISCDNAHAVHPNFPEKHDEHHGPAINGGPVIKVNANQRYATNSATAAMFRDICR
ECCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCEECCCHHHHHHHHHHHH
EAGTPVQTFVTRADMGCGSTIGPITATELGVPTLDVGIPQWGMHSIRETAGSRDADYLIR
HCCCCHHHHHHHHCCCCCCCCCCCCHHHCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHH
ALTAFVNRTELD
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA