Click here to switch to the map view.

The map label for this gene is 92113641

Identifier: 92113641

GI number: 92113641

Start: 1725863

End: 1726813

Strand: Direct

Name: 92113641

Synonym: Csal_1517

Alternate gene names: NA

Gene position: 1725863-1726813 (Clockwise)

Preceding gene: 92113633

Following gene: 92113644

Centisome position: 46.69

GC content: 62.78

Gene sequence:

>951_bases
ATGTCTAACAAGACGTCTTTGATCGCGCTGCTGGGCGCCACTACATTGCTTTCACCCCTGGCCATGGCAAATACGCCGGA
AAGCTGCCAGCCGGTACGCTTCGCCGAAGTCGGCTGGACCGACATCACCGCCACCACCGCCTTGACCCGTGAGGTGCTCG
AGGGCCTCGGTTACGAGACGACGTCCAACACCGTCTCCGTGCCGGTGGCCTACGCCGGGATGAAGAACGGCGACTTCGAC
GTGTTCCTGGGCAACTGGATGCCGTCGATGGCCTCGATCAGCGACGAGTATATCGACAAGGGACAGGTGGATCGTCTCGG
CGCCAACCTGGAGGGGGCCAAGTACACCCTGGCGGTGCCGCAGTACGTCTACGATGCCGGCGTGACCTCGGTCGAAGACC
TGGACGCGCATGCGGACAAGTTCGATAGCCGCCTGTACGGCATCGAAGCGGGCAACGACGGCAATCAGATCATCCAGCAG
ATGATCGATGACGATGCCTTCGGGCTGGGCGACTGGAGCCTGATCGACTCGTCCGAATCGGGCATGCTCGCCGAACTCAA
CTCCCGCACCCAGAGCGAGGAATGGATGGTGTTCCTGGGGTGGGAGCCGCACCCGATGAACACCAACTACGAAATGGCCT
ATCTGGAAGGCGCCGATGACTACTTCGGTCCCAACCTCGGCGGCGCGACCGTGTATACCAACACGCGTGCCGGGTACGCA
GAGGCCTGCGGTAACGTGGGCGAGCTGCTCAACAACCTGAGCTTCACGCTGTCCATGGAAAACGAGATCATGGGCGCCAT
CATGGACGACGGCGAGGATCCGCGCGATGCGGCGCGCACCTGGCTGCAGAACAACCCGTCCGTCCTCGATGAGTGGCTCC
AGGGCGTGACCACCGTCGAAGGCGAGCCCGGGCTGGCGGCCGTGAAGAAAGCGCTGGACATCGACAGCTGA

Upstream 100 bases:

>100_bases
ATCCATAGTGGAAAAGAATTGCCGAATTCATTTAGCATAAAAATACGTTATTGAATCGTCATTCAATGACTATATCAACA
TCAACGCAAGGGAGAATCGC

Downstream 100 bases:

>100_bases
TCGAGGCGTCTCGCCCATTGCCATGGGCTTGCCAACGGGCAAGCCCATGTGCATAATTCGCTCCCGTCGCGAAGCCGTTT
AGCGCAGCGACACGTGGCTA

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Fragment [H]

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MSNKTSLIALLGATTLLSPLAMANTPESCQPVRFAEVGWTDITATTALTREVLEGLGYETTSNTVSVPVAYAGMKNGDFD
VFLGNWMPSMASISDEYIDKGQVDRLGANLEGAKYTLAVPQYVYDAGVTSVEDLDAHADKFDSRLYGIEAGNDGNQIIQQ
MIDDDAFGLGDWSLIDSSESGMLAELNSRTQSEEWMVFLGWEPHPMNTNYEMAYLEGADDYFGPNLGGATVYTNTRAGYA
EACGNVGELLNNLSFTLSMENEIMGAIMDDGEDPRDAARTWLQNNPSVLDEWLQGVTTVEGEPGLAAVKKALDIDS

Sequences:

>Translated_316_residues
MSNKTSLIALLGATTLLSPLAMANTPESCQPVRFAEVGWTDITATTALTREVLEGLGYETTSNTVSVPVAYAGMKNGDFD
VFLGNWMPSMASISDEYIDKGQVDRLGANLEGAKYTLAVPQYVYDAGVTSVEDLDAHADKFDSRLYGIEAGNDGNQIIQQ
MIDDDAFGLGDWSLIDSSESGMLAELNSRTQSEEWMVFLGWEPHPMNTNYEMAYLEGADDYFGPNLGGATVYTNTRAGYA
EACGNVGELLNNLSFTLSMENEIMGAIMDDGEDPRDAARTWLQNNPSVLDEWLQGVTTVEGEPGLAAVKKALDIDS
>Mature_315_residues
SNKTSLIALLGATTLLSPLAMANTPESCQPVRFAEVGWTDITATTALTREVLEGLGYETTSNTVSVPVAYAGMKNGDFDV
FLGNWMPSMASISDEYIDKGQVDRLGANLEGAKYTLAVPQYVYDAGVTSVEDLDAHADKFDSRLYGIEAGNDGNQIIQQM
IDDDAFGLGDWSLIDSSESGMLAELNSRTQSEEWMVFLGWEPHPMNTNYEMAYLEGADDYFGPNLGGATVYTNTRAGYAE
ACGNVGELLNNLSFTLSMENEIMGAIMDDGEDPRDAARTWLQNNPSVLDEWLQGVTTVEGEPGLAAVKKALDIDS

Specific function: Unknown

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 34186; Mature: 34055

Theoretical pI: Translated: 3.72; Mature: 3.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNKTSLIALLGATTLLSPLAMANTPESCQPVRFAEVGWTDITATTALTREVLEGLGYET
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
TSNTVSVPVAYAGMKNGDFDVFLGNWMPSMASISDEYIDKGQVDRLGANLEGAKYTLAVP
CCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECH
QYVYDAGVTSVEDLDAHADKFDSRLYGIEAGNDGNQIIQQMIDDDAFGLGDWSLIDSSES
HHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCC
GMLAELNSRTQSEEWMVFLGWEPHPMNTNYEMAYLEGADDYFGPNLGGATVYTNTRAGYA
CCEEEHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHCCCCCCCEEEEECCCCCHH
EACGNVGELLNNLSFTLSMENEIMGAIMDDGEDPRDAARTWLQNNPSVLDEWLQGVTTVE
HHHCHHHHHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCEECC
GEPGLAAVKKALDIDS
CCCCHHHHHHHHCCCC
>Mature Secondary Structure 
SNKTSLIALLGATTLLSPLAMANTPESCQPVRFAEVGWTDITATTALTREVLEGLGYET
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCC
TSNTVSVPVAYAGMKNGDFDVFLGNWMPSMASISDEYIDKGQVDRLGANLEGAKYTLAVP
CCCEEEEEEEEECCCCCCEEEEECCCCCHHHHHHHHHHCCCCHHHHCCCCCCCEEEEECH
QYVYDAGVTSVEDLDAHADKFDSRLYGIEAGNDGNQIIQQMIDDDAFGLGDWSLIDSSES
HHHHHCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCCCC
GMLAELNSRTQSEEWMVFLGWEPHPMNTNYEMAYLEGADDYFGPNLGGATVYTNTRAGYA
CCEEEHHCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHCCCCCCCEEEEECCCCCHH
EACGNVGELLNNLSFTLSMENEIMGAIMDDGEDPRDAARTWLQNNPSVLDEWLQGVTTVE
HHHCHHHHHHHCCEEEEEECCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHCCEECC
GEPGLAAVKKALDIDS
CCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10708384 [H]