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The map label for this gene is rlpA [H]

Identifier: 92113633

GI number: 92113633

Start: 1711084

End: 1711428

Strand: Direct

Name: rlpA [H]

Synonym: Csal_1509

Alternate gene names: 92113633

Gene position: 1711084-1711428 (Clockwise)

Preceding gene: 92113632

Following gene: 92113641

Centisome position: 46.29

GC content: 64.06

Gene sequence:

>345_bases
GTGGTGGCGTTGGCGGGATGCGCCACCGATGGTGACGCAACGTCCGCCGGTGCGACCTCAGAGCGCGGTCAGGCCAGCTA
TTATCATGATCGCTATCAGGGACAGCGCACGGCCAGCGGCGAGCCATACGATGCCCAGGCATTGACCGCCGCGCATCGAC
GGTTGCCGTTCGATACCCGTGTGCGTGTTACCAACTTGGATAACGGCCGGCAAGTGACGGTACGCATCAACGACCGAGGT
CCCTTTACCGAGGGGCGAGTCATCGACCTTTCGCGCCGTGCAGCCGAGCGTCTTGGCATGATCAAGGCCGGCACGGCGCC
GGTACGTGTGACGCCGTTGCGGTAA

Upstream 100 bases:

>100_bases
AAGCGCTAGCGGGGCGTCAGACGACCGGCTCGACGGTATTGCTACCCTGATGTGGCGTCGTATATCTCGGCTGATGGCGG
TCGTGAGCGGGACGGTTGCC

Downstream 100 bases:

>100_bases
GAGCCATCCCGCGCGACCGTGCCTCATCGAGGTGCGGTCGCGCGCCCTTCAGGCTATGTCGTGTGCCAGACCACACGGTC
CTTGTCGGTGGCGAAGGCGT

Product: rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MVALAGCATDGDATSAGATSERGQASYYHDRYQGQRTASGEPYDAQALTAAHRRLPFDTRVRVTNLDNGRQVTVRINDRG
PFTEGRVIDLSRRAAERLGMIKAGTAPVRVTPLR

Sequences:

>Translated_114_residues
MVALAGCATDGDATSAGATSERGQASYYHDRYQGQRTASGEPYDAQALTAAHRRLPFDTRVRVTNLDNGRQVTVRINDRG
PFTEGRVIDLSRRAAERLGMIKAGTAPVRVTPLR
>Mature_114_residues
MVALAGCATDGDATSAGATSERGQASYYHDRYQGQRTASGEPYDAQALTAAHRRLPFDTRVRVTNLDNGRQVTVRINDRG
PFTEGRVIDLSRRAAERLGMIKAGTAPVRVTPLR

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

Organism=Escherichia coli, GI1786852, Length=94, Percent_Identity=47.8723404255319, Blast_Score=84, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014733
- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 12375; Mature: 12375

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVALAGCATDGDATSAGATSERGQASYYHDRYQGQRTASGEPYDAQALTAAHRRLPFDTR
CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCE
VRVTNLDNGRQVTVRINDRGPFTEGRVIDLSRRAAERLGMIKAGTAPVRVTPLR
EEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHCCEEECCCCCEEEEECC
>Mature Secondary Structure
MVALAGCATDGDATSAGATSERGQASYYHDRYQGQRTASGEPYDAQALTAAHRRLPFDTR
CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCE
VRVTNLDNGRQVTVRINDRGPFTEGRVIDLSRRAAERLGMIKAGTAPVRVTPLR
EEEEECCCCCEEEEEECCCCCCCCCEEEECHHHHHHHCCEEECCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10688204 [H]