| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is livK [C]
Identifier: 92113543
GI number: 92113543
Start: 1604636
End: 1605850
Strand: Direct
Name: livK [C]
Synonym: Csal_1418
Alternate gene names: 92113543
Gene position: 1604636-1605850 (Clockwise)
Preceding gene: 92113535
Following gene: 92113551
Centisome position: 43.41
GC content: 63.87
Gene sequence:
>1215_bases ATGACCGTCAAGAAACCGCTTATCGGTGCTATTTCCGCGGTGGCCCTGGCCACCAGTATTTCCGCCCTGGCCGAACCGCT CAAGATCGGTGTGCTGGTGCCGCTGACCGGCGACCTGCAAAGCTATGGCGAACCCGCGCTCAAGGCGGCGCAACTCGCGG CCAAGGAGATCAATGCTGCCGGCGGCGTGCTCGGCGAAGACGTCGAGATCAGCAGTGGCGACACTCAGACCTCGCCGCAG CCCGGCGTCGCCGCGGCCCAGAAGCTGGTCAACATCGAGGGCGTCAACGCGATCATGGGCGCGCTCTCCAGTGGGGTGAC CATTCCCGTGGCGCAGAGCGTTGCCAAGGCCGAGCAGATACCGCAGGTCAGCAGCGCCTCGACTTCGCCGGTCATCACTT CGCTGGATGACGACGACTTCCTGTTTCGTACCGTACCGTCTGACGCCTTCCAGGGCGTAGCGCTCTCCGAAGTGACCCAG GAGAAGGGCTACGAAAACGTCAGCATCATCTATATCAACAACGATTACGGCAAAGGGTTGGCCGAGGCTTTCACCCAGGC CTTCGAAAAGGCGGGGGGCACGGTGTCCGCCACGGTGGCCTACGAACAGGGCCAGGCGGCCTATCGCGGCGAACTGCAGC AGGCGGCCAGCGACGATGCGGAGGCGCTGGTCCTGGTCGGCTATCCGGAGAACGGGCAGACCATCCTGCGTCAGGCGCTG GAAGGCGGTTTCTTCCGAAACTTCGTGTTCACCGACGGCATGAAGGCCCCCGAGCTGGTCGACAACCTGGGGGCGCAATA TCTCGAGGGCTCGGTGGGCACCGTGCCGCAGGCCCGCGACGACTCCCCGGGCGCCCAGCATTTCAGCAGCGCCTATGAGA GCGAATACGACTCGCTGCCGCCCAAGCCCTATCTGGATACCGCCTACGACGCCTTCTATCTGCTGTCGCTGGCGGCTCAG GCGGCGGGTTCCACCGACAGCGTGGCGATTCGCGACCAACTGCGCGCGGTGGCCAATCCGCCGGGCGAGCAGGTCGGTCC GGGCGAGTTCGAGAAAGCCGTCAAGCTGCTCGAGGAAGGCAAGGAAATCGATTATGAAGGCGCGTCCGGTTCGGTCAACT TCGACGACAACGGCGACGTGCCGGGGACCTTCGGCGAGTGGACGTTCAAGGATGGCGAAGTGGTGACCAATCGAATCTTC GAACCCAAGATGTAA
Upstream 100 bases:
>100_bases TCAGCGATCCGCTTATGCTGGACGTCGGGTTGATAGCAAAATGAAGGGTCATACCCGCCGATCAATCAACAATTAAGGTC TGCACAAGGAGTCTTCTGCA
Downstream 100 bases:
>100_bases TCGCTCGTCGGGCGGTCGGATGTCGTCTGGCCGCCGCGGCGAACGTTTCAGCGCTATTGCCATTCACGCAACGCCCGGCT CAGGCCGGGCGTTGTCGTGA
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MTVKKPLIGAISAVALATSISALAEPLKIGVLVPLTGDLQSYGEPALKAAQLAAKEINAAGGVLGEDVEISSGDTQTSPQ PGVAAAQKLVNIEGVNAIMGALSSGVTIPVAQSVAKAEQIPQVSSASTSPVITSLDDDDFLFRTVPSDAFQGVALSEVTQ EKGYENVSIIYINNDYGKGLAEAFTQAFEKAGGTVSATVAYEQGQAAYRGELQQAASDDAEALVLVGYPENGQTILRQAL EGGFFRNFVFTDGMKAPELVDNLGAQYLEGSVGTVPQARDDSPGAQHFSSAYESEYDSLPPKPYLDTAYDAFYLLSLAAQ AAGSTDSVAIRDQLRAVANPPGEQVGPGEFEKAVKLLEEGKEIDYEGASGSVNFDDNGDVPGTFGEWTFKDGEVVTNRIF EPKM
Sequences:
>Translated_404_residues MTVKKPLIGAISAVALATSISALAEPLKIGVLVPLTGDLQSYGEPALKAAQLAAKEINAAGGVLGEDVEISSGDTQTSPQ PGVAAAQKLVNIEGVNAIMGALSSGVTIPVAQSVAKAEQIPQVSSASTSPVITSLDDDDFLFRTVPSDAFQGVALSEVTQ EKGYENVSIIYINNDYGKGLAEAFTQAFEKAGGTVSATVAYEQGQAAYRGELQQAASDDAEALVLVGYPENGQTILRQAL EGGFFRNFVFTDGMKAPELVDNLGAQYLEGSVGTVPQARDDSPGAQHFSSAYESEYDSLPPKPYLDTAYDAFYLLSLAAQ AAGSTDSVAIRDQLRAVANPPGEQVGPGEFEKAVKLLEEGKEIDYEGASGSVNFDDNGDVPGTFGEWTFKDGEVVTNRIF EPKM >Mature_403_residues TVKKPLIGAISAVALATSISALAEPLKIGVLVPLTGDLQSYGEPALKAAQLAAKEINAAGGVLGEDVEISSGDTQTSPQP GVAAAQKLVNIEGVNAIMGALSSGVTIPVAQSVAKAEQIPQVSSASTSPVITSLDDDDFLFRTVPSDAFQGVALSEVTQE KGYENVSIIYINNDYGKGLAEAFTQAFEKAGGTVSATVAYEQGQAAYRGELQQAASDDAEALVLVGYPENGQTILRQALE GGFFRNFVFTDGMKAPELVDNLGAQYLEGSVGTVPQARDDSPGAQHFSSAYESEYDSLPPKPYLDTAYDAFYLLSLAAQA AGSTDSVAIRDQLRAVANPPGEQVGPGEFEKAVKLLEEGKEIDYEGASGSVNFDDNGDVPGTFGEWTFKDGEVVTNRIFE PKM
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Homo sapiens, GI4504147, Length=109, Percent_Identity=37.6146788990826, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI110611176, Length=105, Percent_Identity=38.0952380952381, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI32528268, Length=109, Percent_Identity=37.6146788990826, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI187960069, Length=131, Percent_Identity=31.2977099236641, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI187960067, Length=131, Percent_Identity=31.2977099236641, Blast_Score=65, Evalue=8e-11, Organism=Escherichia coli, GI1789867, Length=341, Percent_Identity=27.5659824046921, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI48994941, Length=326, Percent_Identity=29.4478527607362, Blast_Score=104, Evalue=1e-23, Organism=Drosophila melanogaster, GI221330057, Length=344, Percent_Identity=24.4186046511628, Blast_Score=75, Evalue=1e-13, Organism=Drosophila melanogaster, GI221330059, Length=339, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI221330055, Length=339, Percent_Identity=23.8938053097345, Blast_Score=74, Evalue=2e-13,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 42281; Mature: 42150
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKKPLIGAISAVALATSISALAEPLKIGVLVPLTGDLQSYGEPALKAAQLAAKEINAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHC GGVLGEDVEISSGDTQTSPQPGVAAAQKLVNIEGVNAIMGALSSGVTIPVAQSVAKAEQI CCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHC PQVSSASTSPVITSLDDDDFLFRTVPSDAFQGVALSEVTQEKGYENVSIIYINNDYGKGL CCCCCCCCCCEEEECCCCCCEEEECCCHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHH AEAFTQAFEKAGGTVSATVAYEQGQAAYRGELQQAASDDAEALVLVGYPENGQTILRQAL HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH EGGFFRNFVFTDGMKAPELVDNLGAQYLEGSVGTVPQARDDSPGAQHFSSAYESEYDSLP CCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PKPYLDTAYDAFYLLSLAAQAAGSTDSVAIRDQLRAVANPPGEQVGPGEFEKAVKLLEEG CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC KEIDYEGASGSVNFDDNGDVPGTFGEWTFKDGEVVTNRIFEPKM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC >Mature Secondary Structure TVKKPLIGAISAVALATSISALAEPLKIGVLVPLTGDLQSYGEPALKAAQLAAKEINAA CCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHCCCHHHHHHHHHHHHHHHC GGVLGEDVEISSGDTQTSPQPGVAAAQKLVNIEGVNAIMGALSSGVTIPVAQSVAKAEQI CCCCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCEEHHHHHHHHHHHC PQVSSASTSPVITSLDDDDFLFRTVPSDAFQGVALSEVTQEKGYENVSIIYINNDYGKGL CCCCCCCCCCEEEECCCCCCEEEECCCHHHCCCHHHHHHHHCCCCCEEEEEEECCCCCHH AEAFTQAFEKAGGTVSATVAYEQGQAAYRGELQQAASDDAEALVLVGYPENGQTILRQAL HHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHH EGGFFRNFVFTDGMKAPELVDNLGAQYLEGSVGTVPQARDDSPGAQHFSSAYESEYDSLP CCCCEEHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC PKPYLDTAYDAFYLLSLAAQAAGSTDSVAIRDQLRAVANPPGEQVGPGEFEKAVKLLEEG CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC KEIDYEGASGSVNFDDNGDVPGTFGEWTFKDGEVVTNRIFEPKM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]