| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is gltX
Identifier: 92113337
GI number: 92113337
Start: 1384812
End: 1386296
Strand: Direct
Name: gltX
Synonym: Csal_1211
Alternate gene names: 92113337
Gene position: 1384812-1386296 (Clockwise)
Preceding gene: 92113336
Following gene: 92113339
Centisome position: 37.46
GC content: 61.62
Gene sequence:
>1485_bases ATGACCGTACGTACGCGTATCGCACCATCGCCCACCGGCGATCCTCATGTCGGCACGGCCTATATCGCCTTGTTCAATCT GTGCTTCGCGCGCCAGCATGGTGGACAGTTCATTCTGCGCATCGAGGACACGGACCGGGTGCGCTCGACGGCCGAGTCGG AGCAGATGATTCTCGACTCGCTGCGCTGGCTGGGCCTGGAATGGGACGAGGGGCCTGACGTGGGCGGCCCGCATGGCCCC TATCGTCAAAGTGAGCGGGGCGATATCTACGCGCAATATGCGCAGCAGCTGCTCGATGCCGGGCACGCCTTCAAGTGCTA CCGGACCAGCGAGGAGCTCGACGAACTGCGCGAAGCGCGCAAGGCGGCGGGTCTGCACCTGGCGCTCAAGCCGGCGGATC TGGCGCTTCCCGACGATGAAGTGGCGCGTCGCGAGCGTGAGCAGTGGCCTTATGTGGTGCGCATGAAGGTGCCCGGGGAG GGCAGCTGCGTGGTCAGCGACATGCTGCGAGGCGAGATCGAGGTGGACTGGGCCCAGGTCGATGCGCAGATCCTGCTCAA GTCCGATGGCATGCCGACCTACCACCTGGCCAATGTCGTCGACGATCACCTGATGGGCATCACCCACGTGATGCGTGGCG AGGAATGGATCAACTCGGCACCCAAGCACAAGCTTCTGTACGAGTATTTCGACTGGCCGATGCCGACGCTATGCCACATG CCGCTGCTGCGTAACCCGGACAAGTCGAAGCTCTCCAAGCGCAAGAATCCGACTTCCATCAATTATTACCGGCGGATGGG GTTTCTGCCGCAGGCAGTGACCAATTATCTGGGCCGCATGGGATGGTCAATGCCCGACGACCGCGAGAAGTTCACGCTCG AGGAGATGATGGCGAACTTCGATATCCAGCGTGTTTCCCTGGGGGGGCCGGTCTTCGATCTCGAAAAGCTGACCTGGCTC AATGGGGTGTACATTCGCGAGGATCTGGACGATGCAGCGCTGCTCCAGGCGTTGCGCGAGTGGGCGTTCAATGATGCCTA CGTCAATCAGATTCTGCCGCAGGTGCGCCCGCGCATCTCGACACTGTCCGATGTCATGCCGCTGGCCGGGCATTTCTTTT CCGGTGTGCCGCCGCTCGAGGCATCCAGCTTCGACGGCATCAAGCTGGAGCATGAAACGCTGCTCAAGTTGCTGCAGTTC CTGACCTGGCGTCTCGAAGGCGTCTCCCGCTGGGAGAAGGACGTGCTGCTCGATGACGTCAAGGCTCTGGCCGAGGCCTT CGACATGAAGATGAAGGCGTTCCTGGCGCCGGTTTTCATCGCTGTGACCGGCAGTGCGACATCGACATCGGTGTTGGATG CCATGGCCATTCTGGGGTCGGACATGACCCGCGCGCGGCTGCGTCATGCCATCGAGGTGCTGGGTGGTGTCTCCAAGAAA CAGGCCAAGCGCTTCGAGAAGGAATATCGGCAGTTGCAGGTGTGA
Upstream 100 bases:
>100_bases CGAGCTTCGGTCTCGCCGGCGTTTGGCCCGGTGGTGCTGATGCCGGATAGGCGCATGCGTATAATGGTGCCATCGTCAAT CACCAATGATCGGGAATTCC
Downstream 100 bases:
>100_bases GTCGAGGCGCCTTGCGCCTGGAAGAGGGGGGAACGCCGCTATGCCACCTGGAGGGGCAGGCACGCTCTCCCTTCTTCCTG AAAAGTGTTGACGTGGAAGG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRVRSTAESEQMILDSLRWLGLEWDEGPDVGGPHGP YRQSERGDIYAQYAQQLLDAGHAFKCYRTSEELDELREARKAAGLHLALKPADLALPDDEVARREREQWPYVVRMKVPGE GSCVVSDMLRGEIEVDWAQVDAQILLKSDGMPTYHLANVVDDHLMGITHVMRGEEWINSAPKHKLLYEYFDWPMPTLCHM PLLRNPDKSKLSKRKNPTSINYYRRMGFLPQAVTNYLGRMGWSMPDDREKFTLEEMMANFDIQRVSLGGPVFDLEKLTWL NGVYIREDLDDAALLQALREWAFNDAYVNQILPQVRPRISTLSDVMPLAGHFFSGVPPLEASSFDGIKLEHETLLKLLQF LTWRLEGVSRWEKDVLLDDVKALAEAFDMKMKAFLAPVFIAVTGSATSTSVLDAMAILGSDMTRARLRHAIEVLGGVSKK QAKRFEKEYRQLQV
Sequences:
>Translated_494_residues MTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRVRSTAESEQMILDSLRWLGLEWDEGPDVGGPHGP YRQSERGDIYAQYAQQLLDAGHAFKCYRTSEELDELREARKAAGLHLALKPADLALPDDEVARREREQWPYVVRMKVPGE GSCVVSDMLRGEIEVDWAQVDAQILLKSDGMPTYHLANVVDDHLMGITHVMRGEEWINSAPKHKLLYEYFDWPMPTLCHM PLLRNPDKSKLSKRKNPTSINYYRRMGFLPQAVTNYLGRMGWSMPDDREKFTLEEMMANFDIQRVSLGGPVFDLEKLTWL NGVYIREDLDDAALLQALREWAFNDAYVNQILPQVRPRISTLSDVMPLAGHFFSGVPPLEASSFDGIKLEHETLLKLLQF LTWRLEGVSRWEKDVLLDDVKALAEAFDMKMKAFLAPVFIAVTGSATSTSVLDAMAILGSDMTRARLRHAIEVLGGVSKK QAKRFEKEYRQLQV >Mature_493_residues TVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRVRSTAESEQMILDSLRWLGLEWDEGPDVGGPHGPY RQSERGDIYAQYAQQLLDAGHAFKCYRTSEELDELREARKAAGLHLALKPADLALPDDEVARREREQWPYVVRMKVPGEG SCVVSDMLRGEIEVDWAQVDAQILLKSDGMPTYHLANVVDDHLMGITHVMRGEEWINSAPKHKLLYEYFDWPMPTLCHMP LLRNPDKSKLSKRKNPTSINYYRRMGFLPQAVTNYLGRMGWSMPDDREKFTLEEMMANFDIQRVSLGGPVFDLEKLTWLN GVYIREDLDDAALLQALREWAFNDAYVNQILPQVRPRISTLSDVMPLAGHFFSGVPPLEASSFDGIKLEHETLLKLLQFL TWRLEGVSRWEKDVLLDDVKALAEAFDMKMKAFLAPVFIAVTGSATSTSVLDAMAILGSDMTRARLRHAIEVLGGVSKKQ AKRFEKEYRQLQV
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=492, Percent_Identity=31.7073170731707, Blast_Score=239, Evalue=3e-63, Organism=Escherichia coli, GI1788743, Length=493, Percent_Identity=34.6855983772819, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI226510925, Length=257, Percent_Identity=32.295719844358, Blast_Score=110, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71993394, Length=357, Percent_Identity=37.8151260504202, Blast_Score=230, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6324540, Length=357, Percent_Identity=39.4957983193277, Blast_Score=250, Evalue=3e-67, Organism=Drosophila melanogaster, GI24665321, Length=499, Percent_Identity=33.4669338677355, Blast_Score=247, Evalue=2e-65,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_CHRSD (Q1QY92)
Other databases:
- EMBL: CP000285 - RefSeq: YP_573265.1 - ProteinModelPortal: Q1QY92 - SMR: Q1QY92 - STRING: Q1QY92 - GeneID: 4027356 - GenomeReviews: CP000285_GR - KEGG: csa:Csal_1211 - NMPDR: fig|290398.4.peg.1036 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: MAHIPLI - ProtClustDB: PRK01406 - BioCyc: CSAL290398:CSAL_1211-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 56183; Mature: 56052
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRVRSTAESEQMILDS CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LRWLGLEWDEGPDVGGPHGPYRQSERGDIYAQYAQQLLDAGHAFKCYRTSEELDELREAR HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH KAAGLHLALKPADLALPDDEVARREREQWPYVVRMKVPGEGSCVVSDMLRGEIEVDWAQV HHCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEHHHH DAQILLKSDGMPTYHLANVVDDHLMGITHVMRGEEWINSAPKHKLLYEYFDWPMPTLCHM CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHCC PLLRNPDKSKLSKRKNPTSINYYRRMGFLPQAVTNYLGRMGWSMPDDREKFTLEEMMANF HHHCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC DIQRVSLGGPVFDLEKLTWLNGVYIREDLDDAALLQALREWAFNDAYVNQILPQVRPRIS CCEEEECCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TLSDVMPLAGHFFSGVPPLEASSFDGIKLEHETLLKLLQFLTWRLEGVSRWEKDVLLDDV HHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALAEAFDMKMKAFLAPVFIAVTGSATSTSVLDAMAILGSDMTRARLRHAIEVLGGVSKK HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH QAKRFEKEYRQLQV HHHHHHHHHHHCCC >Mature Secondary Structure TVRTRIAPSPTGDPHVGTAYIALFNLCFARQHGGQFILRIEDTDRVRSTAESEQMILDS CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHH LRWLGLEWDEGPDVGGPHGPYRQSERGDIYAQYAQQLLDAGHAFKCYRTSEELDELREAR HHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHH KAAGLHLALKPADLALPDDEVARREREQWPYVVRMKVPGEGSCVVSDMLRGEIEVDWAQV HHCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCCCEEEHHHH DAQILLKSDGMPTYHLANVVDDHLMGITHVMRGEEWINSAPKHKLLYEYFDWPMPTLCHM CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHHHCC PLLRNPDKSKLSKRKNPTSINYYRRMGFLPQAVTNYLGRMGWSMPDDREKFTLEEMMANF HHHCCCCHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCC DIQRVSLGGPVFDLEKLTWLNGVYIREDLDDAALLQALREWAFNDAYVNQILPQVRPRIS CCEEEECCCCCHHHHHHHHHCCEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH TLSDVMPLAGHFFSGVPPLEASSFDGIKLEHETLLKLLQFLTWRLEGVSRWEKDVLLDDV HHHHHHHHHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KALAEAFDMKMKAFLAPVFIAVTGSATSTSVLDAMAILGSDMTRARLRHAIEVLGGVSKK HHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHH QAKRFEKEYRQLQV HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA