| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yijE [C]
Identifier: 92113250
GI number: 92113250
Start: 1281173
End: 1282111
Strand: Direct
Name: yijE [C]
Synonym: Csal_1123
Alternate gene names: 92113250
Gene position: 1281173-1282111 (Clockwise)
Preceding gene: 92113247
Following gene: 92113252
Centisome position: 34.66
GC content: 67.84
Gene sequence:
>939_bases ATGACGGAGTCGACTTCGGAGGCTGTCGCGGGAAGGCCGGCGTCGCCGCGCTTGCGACGCGGCCTGGATATGCCTGCCGG CATCGCGATGACCGGGTTTTGTCTGGTGCTGGGATTGCAGCAGGTGGCCATCAAGGCCGTGGCCGACGATATCACGCCCT TGAGCCAGGTCGCGTTGCGTTCGTTGCTGGCGGGGTTGCTGGTGCTGGTCGTCGCGCGCATTCAGGGCATCGGCCTGGCG GCGTTTCGCGGTCGGCTGGGTGCAGGCATTCTCGTCGGCCTGGGCTTTGCGGGGGAGTTCGGTTTCGTCGCCTGGGGGCT CAACTACACCCTGGCGTCGCACATGTCGGTGTTTCTGTACACGGCGCCGGTGTTCGCCGCCCTGGGACTGCATCTGTGGG TGCCGGGCGAACAGCTGGCGCGGCACCAATGGTGGGGGATCGGCGTGGCATTCGCGGGCATGCTGGTCGCCATGGCGCCC TCGGCCGCACCCGGGGCGCCGGCCGGCGACATTCTCCTGGGCGACGCCCTGGGATTGCTGGCGGGGTTGTCATGGGCCGC CACCACCCTGGTGGTGCGTCGCTCCTCGCTTTCCGAGGCGCCCCCCGTGCAGACGCTGACGTACCAACTCCTGACGGCGG GCGCGCTGTTGTTGCCCATCACCCTATGGCTGGGCGATTGGCAGCAGGCCACGCCCAGCGGCATGGCCGTGGCCAGCATG ACCTTCCAGACGCTGGTCATCTCGTTCGGTGCCCTGCTGTTGTGGTTCGCCCTGCTGCGCCGTTACTGGGCCTCGCAACT GGGTGTCTTGTCGTTCCTGTCACCGATCTTCGGAGTGCTCTTCGGCGCCGCCTTGCTGGACGAGCCCTTGAGCTGGAACT TCCTGCTCGGCGGGGCGGCGATTCTGCTGGGGATCGTGCTGGTCAGTCGCCAGGCGTGA
Upstream 100 bases:
>100_bases CATGAGTTGAGTTTTCCTGAGCCTGAGACTGCAGATTAATCGTTTGGATCGCGGCGCGGCAAATGCTCCACTGAGTCTCG ATTCAATGGAGGATGCGATC
Downstream 100 bases:
>100_bases TGGCAGAGGCCCGGGTCAGGCGACCCAGTTCCTCGAGGTAGCTTTCCACTACCAGGTTGGGCGGCGCGCCCTTGCGAGTG ATGGCGCTGTAGTGGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Transporter RhaT Family DMT Superfamily; Puative Integral Membrane Protein
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTESTSEAVAGRPASPRLRRGLDMPAGIAMTGFCLVLGLQQVAIKAVADDITPLSQVALRSLLAGLLVLVVARIQGIGLA AFRGRLGAGILVGLGFAGEFGFVAWGLNYTLASHMSVFLYTAPVFAALGLHLWVPGEQLARHQWWGIGVAFAGMLVAMAP SAAPGAPAGDILLGDALGLLAGLSWAATTLVVRRSSLSEAPPVQTLTYQLLTAGALLLPITLWLGDWQQATPSGMAVASM TFQTLVISFGALLLWFALLRRYWASQLGVLSFLSPIFGVLFGAALLDEPLSWNFLLGGAAILLGIVLVSRQA
Sequences:
>Translated_312_residues MTESTSEAVAGRPASPRLRRGLDMPAGIAMTGFCLVLGLQQVAIKAVADDITPLSQVALRSLLAGLLVLVVARIQGIGLA AFRGRLGAGILVGLGFAGEFGFVAWGLNYTLASHMSVFLYTAPVFAALGLHLWVPGEQLARHQWWGIGVAFAGMLVAMAP SAAPGAPAGDILLGDALGLLAGLSWAATTLVVRRSSLSEAPPVQTLTYQLLTAGALLLPITLWLGDWQQATPSGMAVASM TFQTLVISFGALLLWFALLRRYWASQLGVLSFLSPIFGVLFGAALLDEPLSWNFLLGGAAILLGIVLVSRQA >Mature_311_residues TESTSEAVAGRPASPRLRRGLDMPAGIAMTGFCLVLGLQQVAIKAVADDITPLSQVALRSLLAGLLVLVVARIQGIGLAA FRGRLGAGILVGLGFAGEFGFVAWGLNYTLASHMSVFLYTAPVFAALGLHLWVPGEQLARHQWWGIGVAFAGMLVAMAPS AAPGAPAGDILLGDALGLLAGLSWAATTLVVRRSSLSEAPPVQTLTYQLLTAGALLLPITLWLGDWQQATPSGMAVASMT FQTLVISFGALLLWFALLRRYWASQLGVLSFLSPIFGVLFGAALLDEPLSWNFLLGGAAILLGIVLVSRQA
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32617; Mature: 32486
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESTSEAVAGRPASPRLRRGLDMPAGIAMTGFCLVLGLQQVAIKAVADDITPLSQVALR CCCCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SLLAGLLVLVVARIQGIGLAAFRGRLGAGILVGLGFAGEFGFVAWGLNYTLASHMSVFLY HHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH TAPVFAALGLHLWVPGEQLARHQWWGIGVAFAGMLVAMAPSAAPGAPAGDILLGDALGLL HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AGLSWAATTLVVRRSSLSEAPPVQTLTYQLLTAGALLLPITLWLGDWQQATPSGMAVASM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH TFQTLVISFGALLLWFALLRRYWASQLGVLSFLSPIFGVLFGAALLDEPLSWNFLLGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILLGIVLVSRQA HHHHHHHHHCCC >Mature Secondary Structure TESTSEAVAGRPASPRLRRGLDMPAGIAMTGFCLVLGLQQVAIKAVADDITPLSQVALR CCCCCHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH SLLAGLLVLVVARIQGIGLAAFRGRLGAGILVGLGFAGEFGFVAWGLNYTLASHMSVFLY HHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHH TAPVFAALGLHLWVPGEQLARHQWWGIGVAFAGMLVAMAPSAAPGAPAGDILLGDALGLL HHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AGLSWAATTLVVRRSSLSEAPPVQTLTYQLLTAGALLLPITLWLGDWQQATPSGMAVASM HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH TFQTLVISFGALLLWFALLRRYWASQLGVLSFLSPIFGVLFGAALLDEPLSWNFLLGGAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH ILLGIVLVSRQA HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA