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The map label for this gene is ycfF [C]

Identifier: 92113039

GI number: 92113039

Start: 1025292

End: 1025633

Strand: Direct

Name: ycfF [C]

Synonym: Csal_0911

Alternate gene names: 92113039

Gene position: 1025292-1025633 (Clockwise)

Preceding gene: 92113038

Following gene: 92113040

Centisome position: 27.74

GC content: 59.94

Gene sequence:

>342_bases
ATGGAGTGCCTGTTCTGCAAGATGGTGAATCGCGACATCGAGCCCGATGTCGTCTACGAGGATGAACACGTGCTGGCGTT
CAACGACATCAACCCGCAAGCGCCGACCCATGTACTGATCATCCCCAAGAAACACATCGCCACGCTCAACGACATCACGC
CGGAGGATCTGACCCTGGTCGGCCGGCTGCAGCACACCGCCGCCACGCTGGCCCGCGAGCTGGGGTTTGCCGAGGACGGC
TACCGCGTGGTGATGAATTGCAATGACCACGGCGGACAGTCGGTCTATCATATTCATATGCATCTGATGGGCGGTCGTCG
CTTCACTTGGCCAGCGGGCTGA

Upstream 100 bases:

>100_bases
GGCCATGGACTTGATTCTGTCGCCGCTGGTGACGCAACTGCTGGATCAACGCCGTTTCCGCTAGACGGTTACCGACATCG
ATTTTCGAAGAGGAAGCCTC

Downstream 100 bases:

>100_bases
CCGTCACGCGCCAGCGCCGTGCGCGTGTCTTCCGAGCGATGGACGCATCGATGCTGCCGGGCCGCTCGACGAGTGGCCCG
GTTTTCTGATGCCCGCGCGT

Product: histidine triad (HIT) protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MECLFCKMVNRDIEPDVVYEDEHVLAFNDINPQAPTHVLIIPKKHIATLNDITPEDLTLVGRLQHTAATLARELGFAEDG
YRVVMNCNDHGGQSVYHIHMHLMGGRRFTWPAG

Sequences:

>Translated_113_residues
MECLFCKMVNRDIEPDVVYEDEHVLAFNDINPQAPTHVLIIPKKHIATLNDITPEDLTLVGRLQHTAATLARELGFAEDG
YRVVMNCNDHGGQSVYHIHMHLMGGRRFTWPAG
>Mature_113_residues
MECLFCKMVNRDIEPDVVYEDEHVLAFNDINPQAPTHVLIIPKKHIATLNDITPEDLTLVGRLQHTAATLARELGFAEDG
YRVVMNCNDHGGQSVYHIHMHLMGGRRFTWPAG

Specific function: Unknown

COG id: COG0537

COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HIT domain [H]

Homologues:

Organism=Homo sapiens, GI4885413, Length=112, Percent_Identity=44.6428571428571, Blast_Score=113, Evalue=3e-26,
Organism=Homo sapiens, GI14211923, Length=111, Percent_Identity=42.3423423423423, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1787346, Length=105, Percent_Identity=56.1904761904762, Blast_Score=120, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI17506713, Length=112, Percent_Identity=44.6428571428571, Blast_Score=119, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI6320078, Length=118, Percent_Identity=37.2881355932203, Blast_Score=65, Evalue=3e-12,
Organism=Drosophila melanogaster, GI28574010, Length=112, Percent_Identity=46.4285714285714, Blast_Score=112, Evalue=3e-26,
Organism=Drosophila melanogaster, GI24581222, Length=112, Percent_Identity=46.4285714285714, Blast_Score=112, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011146
- InterPro:   IPR011151
- InterPro:   IPR019808
- InterPro:   IPR001310 [H]

Pfam domain/function: PF01230 HIT [H]

EC number: NA

Molecular weight: Translated: 12779; Mature: 12779

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECLFCKMVNRDIEPDVVYEDEHVLAFNDINPQAPTHVLIIPKKHIATLNDITPEDLTLV
CCEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCEEEEEECHHHCEECCCCCCCCEEEE
GRLQHTAATLARELGFAEDGYRVVMNCNDHGGQSVYHIHMHLMGGRRFTWPAG
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCEEECCCC
>Mature Secondary Structure
MECLFCKMVNRDIEPDVVYEDEHVLAFNDINPQAPTHVLIIPKKHIATLNDITPEDLTLV
CCEEEEEECCCCCCCCEEECCCEEEEECCCCCCCCEEEEEECHHHCEECCCCCCCCEEEE
GRLQHTAATLARELGFAEDGYRVVMNCNDHGGQSVYHIHMHLMGGRRFTWPAG
HHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEEEEECCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]