| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is cbbP [H]
Identifier: 92113038
GI number: 92113038
Start: 1024383
End: 1025255
Strand: Direct
Name: cbbP [H]
Synonym: Csal_0910
Alternate gene names: 92113038
Gene position: 1024383-1025255 (Clockwise)
Preceding gene: 92113037
Following gene: 92113039
Centisome position: 27.71
GC content: 62.77
Gene sequence:
>873_bases ATGTCGCGTGAGTATCCGATCATCGCGGTGACCGGCTCTTCGGGCGCTGGCACCACCACCGTCAAGCGGACGTTCGAGCG CATGTTCGCGCGCGAGGACATTCACGCGGCGTTCGTGGATGGCGATGCCTTTCACCGCTACACCCGGGACGAGCTGGCGC GCATCTTCGCCGAGGAACCCAGCCGCAAGGCCGAGCTGTCGCATTTCGCGGTGGAAGCCAACCTGCTCGACCGCCTCGAG GGACTGTTTCAGGAATACGGCGACCTGGGCGTGGGGATGCACCGGCACTATATCCACGCCGAGGACAAGCAGCGCATCGA GGCCGGGTGCCAGGTCGGCACGTTCACCGAGTGGGAGCCGCTGCCCGGCGGTACCGACCTGTTGTTCTATGAAGGGTTGC ATGGCGGGCTGGTGACCCACGAGTACGACATCGCCAAGCACGTCGACCTGCTGGTGGGCGTGGCGCCGACCATGAACCTC GAATGGATACAGAAGATCCATCGCGACACCAAGCTGCGCGGGCATTCCCAGGAGTCGGTCATCGACACCATTCTGGGGCG CATGAACGATTACGTGCGCTACATCCAGCCGCAGTTCTCGCGCAGTCATATCAACTTCCAGCGTGTACCGACGGTGGATA CGTCCAACCCCTTCGAGGTGCAGGACATTCCCACCGACGCCGAATCCATGGTGGTGATCCGCTTTCGCGATCCGCACTCG GTGGACTTTCCCTATCTGCTGACGATGATTCGCGACTCCTTCATGACGCGTCCGCACACCCTGGTGGTGCCGGGCGCGCG CATGTCCCTGGCCATGGACTTGATTCTGTCGCCGCTGGTGACGCAACTGCTGGATCAACGCCGTTTCCGCTAG
Upstream 100 bases:
>100_bases GGGTGACGCGACATGGAACCGGTACGATCGAGCATCGCCGGCCGCGCGGCCGGCATGACGGGCCACGGGTCAGGCCCTAC GCGATACAGGGAGACGCGGC
Downstream 100 bases:
>100_bases ACGGTTACCGACATCGATTTTCGAAGAGGAAGCCTCATGGAGTGCCTGTTCTGCAAGATGGTGAATCGCGACATCGAGCC CGATGTCGTCTACGAGGATG
Product: phosphoribulokinase
Products: NA
Alternate protein names: PRK; PRKase; Phosphopentokinase [H]
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSREYPIIAVTGSSGAGTTTVKRTFERMFAREDIHAAFVDGDAFHRYTRDELARIFAEEPSRKAELSHFAVEANLLDRLE GLFQEYGDLGVGMHRHYIHAEDKQRIEAGCQVGTFTEWEPLPGGTDLLFYEGLHGGLVTHEYDIAKHVDLLVGVAPTMNL EWIQKIHRDTKLRGHSQESVIDTILGRMNDYVRYIQPQFSRSHINFQRVPTVDTSNPFEVQDIPTDAESMVVIRFRDPHS VDFPYLLTMIRDSFMTRPHTLVVPGARMSLAMDLILSPLVTQLLDQRRFR
Sequences:
>Translated_290_residues MSREYPIIAVTGSSGAGTTTVKRTFERMFAREDIHAAFVDGDAFHRYTRDELARIFAEEPSRKAELSHFAVEANLLDRLE GLFQEYGDLGVGMHRHYIHAEDKQRIEAGCQVGTFTEWEPLPGGTDLLFYEGLHGGLVTHEYDIAKHVDLLVGVAPTMNL EWIQKIHRDTKLRGHSQESVIDTILGRMNDYVRYIQPQFSRSHINFQRVPTVDTSNPFEVQDIPTDAESMVVIRFRDPHS VDFPYLLTMIRDSFMTRPHTLVVPGARMSLAMDLILSPLVTQLLDQRRFR >Mature_289_residues SREYPIIAVTGSSGAGTTTVKRTFERMFAREDIHAAFVDGDAFHRYTRDELARIFAEEPSRKAELSHFAVEANLLDRLEG LFQEYGDLGVGMHRHYIHAEDKQRIEAGCQVGTFTEWEPLPGGTDLLFYEGLHGGLVTHEYDIAKHVDLLVGVAPTMNLE WIQKIHRDTKLRGHSQESVIDTILGRMNDYVRYIQPQFSRSHINFQRVPTVDTSNPFEVQDIPTDAESMVVIRFRDPHSV DFPYLLTMIRDSFMTRPHTLVVPGARMSLAMDLILSPLVTQLLDQRRFR
Specific function: Unknown
COG id: COG3954
COG function: function code C; Phosphoribulokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoribulokinase family [H]
Homologues:
Organism=Escherichia coli, GI2367214, Length=288, Percent_Identity=53.8194444444444, Blast_Score=321, Evalue=3e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006082 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.19 [H]
Molecular weight: Translated: 33201; Mature: 33070
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00567 PHOSPHORIBULOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREYPIIAVTGSSGAGTTTVKRTFERMFAREDIHAAFVDGDAFHRYTRDELARIFAEEP CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCC SRKAELSHFAVEANLLDRLEGLFQEYGDLGVGMHRHYIHAEDKQRIEAGCQVGTFTEWEP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHCCCCCCCCCCCC LPGGTDLLFYEGLHGGLVTHEYDIAKHVDLLVGVAPTMNLEWIQKIHRDTKLRGHSQESV CCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH IDTILGRMNDYVRYIQPQFSRSHINFQRVPTVDTSNPFEVQDIPTDAESMVVIRFRDPHS HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC VDFPYLLTMIRDSFMTRPHTLVVPGARMSLAMDLILSPLVTQLLDQRRFR CCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SREYPIIAVTGSSGAGTTTVKRTFERMFAREDIHAAFVDGDAFHRYTRDELARIFAEEP CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHCC SRKAELSHFAVEANLLDRLEGLFQEYGDLGVGMHRHYIHAEDKQRIEAGCQVGTFTEWEP CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCHHHHHHHCCCCCCCCCCCC LPGGTDLLFYEGLHGGLVTHEYDIAKHVDLLVGVAPTMNLEWIQKIHRDTKLRGHSQESV CCCCCEEEEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHHH IDTILGRMNDYVRYIQPQFSRSHINFQRVPTVDTSNPFEVQDIPTDAESMVVIRFRDPHS HHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCC VDFPYLLTMIRDSFMTRPHTLVVPGARMSLAMDLILSPLVTQLLDQRRFR CCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1964170; 1900916 [H]