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The map label for this gene is 92113013

Identifier: 92113013

GI number: 92113013

Start: 996558

End: 997409

Strand: Direct

Name: 92113013

Synonym: Csal_0885

Alternate gene names: NA

Gene position: 996558-997409 (Clockwise)

Preceding gene: 92113012

Following gene: 92113014

Centisome position: 26.96

GC content: 65.26

Gene sequence:

>852_bases
ATGATCGCCGTTATTTCCTATCAATTTCGGCGCCTGGTGCGTGGCGCAGGCATTTCCCTGGTTTTCGCCGTGGTCGGCTC
CGGTCTCTGGTATTGGCAGGAGCGTGACGTCCGCGATCAGCTCAGCTGGATGGGCGTCCCCGAATGGCAGGCGACGAGCT
GGCAGGGCTTCAACAGGGTGCTGCGCAACGACGGCTTCCTGGTCGGGTGGTCGGACATTCGCGTCAGCCCCCTGTGGGCC
AGCTACATGCTGAATGAAACGGCGGAGGCGCCCATCGGCGATCGGCCCAGCGGGTTCGAGCGCGACTGGCGCTCGCTGTG
GCCGGTGACGTCGGATCAGTACACGCGCAGTGGCTATGATCGTGGCCATCTGGCCCCCAACTACGCGATCGCCCGCGTCT
ACGGGCGCGACGCCCAGCTCGATACCTTTCGCATGACCAATATCACGCCCCAGCGCCCCGATCTGAATCGGCGCGTATGG
CAGCGCCTGGAAGAAGTCGTCATGGACGACTTTCTGCCGCGTTTCGGTCGGCTTCAGGTGGTGACGGGGCCGGTCTTCGA
CGAACGCTTCCTGCACCGGATCGGGTTCACCCAGGTGCCGGCGGCGTTCTACAAGATCATCGTCGTGCCGGGCGAGCACC
CGCGGGCACTGGCCTTTCTCGTGCCGCAAACGGTGCATGGCGACGAGCCGCTCGATCGCTTCCTGGTGAGCATCGACGAA
CTCGAGGCGCGGACTCGTCTCGACTTCTTTCCACGTCTGCCCGAGGCGGTCGAGACGCCGCTGGAGTCCCATATCGAGAC
CCAAGGCTGGGGGCTGGAGCGTGTCGCGCGACGGCCGGGGCGCTTCGACTAG

Upstream 100 bases:

>100_bases
ACCATGTTCTCGCTGGGATGGTAGTTCCCGCCACGACGCGGCCCGCGAGGGCCGCCGATCTTCCGTTTTCGTCACTGCAG
GACAAGGACGCGTCATCGGC

Downstream 100 bases:

>100_bases
ACGACGGGCCGGGCAGAAGAGCCAATGAGCGGGGGAGGAGGTTTCCGCGTGATATCGGCACGGGGCGATGACATCACCGG
GTGGCCGGGGGAAACGGGCA

Product: DNA/RNA non-specific endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MIAVISYQFRRLVRGAGISLVFAVVGSGLWYWQERDVRDQLSWMGVPEWQATSWQGFNRVLRNDGFLVGWSDIRVSPLWA
SYMLNETAEAPIGDRPSGFERDWRSLWPVTSDQYTRSGYDRGHLAPNYAIARVYGRDAQLDTFRMTNITPQRPDLNRRVW
QRLEEVVMDDFLPRFGRLQVVTGPVFDERFLHRIGFTQVPAAFYKIIVVPGEHPRALAFLVPQTVHGDEPLDRFLVSIDE
LEARTRLDFFPRLPEAVETPLESHIETQGWGLERVARRPGRFD

Sequences:

>Translated_283_residues
MIAVISYQFRRLVRGAGISLVFAVVGSGLWYWQERDVRDQLSWMGVPEWQATSWQGFNRVLRNDGFLVGWSDIRVSPLWA
SYMLNETAEAPIGDRPSGFERDWRSLWPVTSDQYTRSGYDRGHLAPNYAIARVYGRDAQLDTFRMTNITPQRPDLNRRVW
QRLEEVVMDDFLPRFGRLQVVTGPVFDERFLHRIGFTQVPAAFYKIIVVPGEHPRALAFLVPQTVHGDEPLDRFLVSIDE
LEARTRLDFFPRLPEAVETPLESHIETQGWGLERVARRPGRFD
>Mature_283_residues
MIAVISYQFRRLVRGAGISLVFAVVGSGLWYWQERDVRDQLSWMGVPEWQATSWQGFNRVLRNDGFLVGWSDIRVSPLWA
SYMLNETAEAPIGDRPSGFERDWRSLWPVTSDQYTRSGYDRGHLAPNYAIARVYGRDAQLDTFRMTNITPQRPDLNRRVW
QRLEEVVMDDFLPRFGRLQVVTGPVFDERFLHRIGFTQVPAAFYKIIVVPGEHPRALAFLVPQTVHGDEPLDRFLVSIDE
LEARTRLDFFPRLPEAVETPLESHIETQGWGLERVARRPGRFD

Specific function: Unknown

COG id: COG1864

COG function: function code F; DNA/RNA endonuclease G, NUC1

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DNA/RNA non-specific endonuclease family [H]

Homologues:

Organism=Homo sapiens, GI53759134, Length=159, Percent_Identity=31.4465408805031, Blast_Score=67, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322253, Length=179, Percent_Identity=30.1675977653631, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018524
- InterPro:   IPR001604
- InterPro:   IPR020821 [H]

Pfam domain/function: PF01223 Endonuclease_NS [H]

EC number: NA

Molecular weight: Translated: 32851; Mature: 32851

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAVISYQFRRLVRGAGISLVFAVVGSGLWYWQERDVRDQLSWMGVPEWQATSWQGFNRV
CEEEEHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRNDGFLVGWSDIRVSPLWASYMLNETAEAPIGDRPSGFERDWRSLWPVTSDQYTRSGYD
HHCCCCEEEECCCEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCC
RGHLAPNYAIARVYGRDAQLDTFRMTNITPQRPDLNRRVWQRLEEVVMDDFLPRFGRLQV
CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VTGPVFDERFLHRIGFTQVPAAFYKIIVVPGEHPRALAFLVPQTVHGDEPLDRFLVSIDE
EECCCHHHHHHHHHCCHHHCHHHEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LEARTRLDFFPRLPEAVETPLESHIETQGWGLERVARRPGRFD
HHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MIAVISYQFRRLVRGAGISLVFAVVGSGLWYWQERDVRDQLSWMGVPEWQATSWQGFNRV
CEEEEHHHHHHHHHCCCHHHHHHHHCCCCEEECCCCHHHHHHHCCCCCCCCCCHHHHHHH
LRNDGFLVGWSDIRVSPLWASYMLNETAEAPIGDRPSGFERDWRSLWPVTSDQYTRSGYD
HHCCCCEEEECCCEECHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCCCCHHHCCCC
RGHLAPNYAIARVYGRDAQLDTFRMTNITPQRPDLNRRVWQRLEEVVMDDFLPRFGRLQV
CCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEE
VTGPVFDERFLHRIGFTQVPAAFYKIIVVPGEHPRALAFLVPQTVHGDEPLDRFLVSIDE
EECCCHHHHHHHHHCCHHHCHHHEEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHH
LEARTRLDFFPRLPEAVETPLESHIETQGWGLERVARRPGRFD
HHHHHHHHHCCCCCHHHHCHHHHHHCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9403685 [H]