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The map label for this gene is ycgB [H]

Identifier: 92113011

GI number: 92113011

Start: 994511

End: 996061

Strand: Direct

Name: ycgB [H]

Synonym: Csal_0883

Alternate gene names: 92113011

Gene position: 994511-996061 (Clockwise)

Preceding gene: 92113010

Following gene: 92113012

Centisome position: 26.9

GC content: 61.44

Gene sequence:

>1551_bases
ATGAGTCCATCCCCCATCGCTACCGGCTCCGACTGGAACTTCGAGATCCTGACGGCCTACGAGCGTGAAATCGCGCGTTT
CGCCAAGGAATATCGTCTGAATACCTATCCCAACCAGATCGAGATCATCACGTCCGAGCAGATGATGGATGCCTATGCCA
GCGTGGGCATGCCGGTGGGCTACCATCACTGGTCGTTCGGCAAGCAGTTCCTGTCCGTCGAGCAGGCGTATCGGCGTGGT
CAGATGGGGCTGGCCTATGAGCTGGTCATCAATTCCGATCCCTGCATCGCCTACCTCATGGAAGAGAACACCTTGATGAT
GCAAGTGCTGGTCATGGCGCACGCCTGCTATGGCCATAACTCGTTCTTCAAGGGGAACTACCTGTTTCGCACCTGGACGG
ATGCCTCGGCGATCGTCGATTACCTGGTGTTCGCGCGCAAATACATTGCCGAGTGCGAGGAGCGTCACGGCGTCGGGGCG
GTGGAGCAACTGCTGGATGCCTGTCACGCCCTGCAGAACTACGGCGTCGATCGCTACAAGCGGCCCTCGCCGATCTCCTC
CGAGGAAGAGGCACGTCGCCAGCAGGAGCGGGAAGCCTACCTGCAGGCGCAAGTCAACGCCCTGTGGCGAACCATCCCCG
AGCAGGCGACACCGACCGCGCAGAGGCCGGACGAGGATGGCGATGATCCGCTCGGGCTGCACCAGCACGGCCGCTATCCC
GCCGAACCTCAGGAAAACCTGCTGTACTTTCTGGAGAAGAATGCTCCGCTGCTGGAGTCATGGCAGCGCGAGGTGGTGCG
GATCGTGCGCAAGCTGGCGCAGTATTTCTACCCGCAGCGTCAGACCCAGGTCATGAACGAGGGGTGGGCCACCTTCTGGC
ACTATACGTTGATGAATCGCCTCTACGATGAAGGCTTGATCGACGAGGGCACGATTCTCGAATTCCTGCACTCGCACACC
GCGGTGATTCAGCAGCCGGGGTTCGACAGTCCCCATTTCAACGGCATCAATCCCTACGCGCTGGGGTTCGCCATGTTCTC
GGACATCCGTCGGATCTGCGAGGCGCCGACTGACGAGGACCGCGAATGGTTCCCGGACATCGCCGGCAGCGACTGGCTGG
ATACGCTGCATTTCGCGATGCGCAACTTCAAGGACGAGTCGTTCATTCAGCAGTTCCTGTCGCCCCGGGTGATCCGCGAC
CTCAAGCTGTTCAGCCTCGTCGACGACGATCGCGATGAGATGCTCACCATCAGTGCCATTCACGATGAACGCGGCTATCG
CCGCGTGCGCGAGGCCCTCTCGGCGCAGTACGCGCTTTCCCTGCGCGAGCCCAACATCCAGGTCTGGGAAGCCGACATTC
GTGGCGATCGGTCGCTGACGCTGCGCCATGTTCAGGACCGTCGGCGGCCGTTGGGCAAGACGCTCTACCCGGTGTTGCGC
CATCTGCATCAGCTGTGGGGATTCCCCGTCAAGCTGGAGTCGGTCGAAGACGACGAGGTCGTGCGCCACTATCAATGGCC
ACTGCCCGGCGACGAGCGCGAGGGGGCATGA

Upstream 100 bases:

>100_bases
CGCCATGCAACAGATCGTCGAGCCGGGGGACATCTACCCGGTCTTCCGCAAGCTGTTTCGCAAGCGCGTCGCATCGTGAC
GAGCAAGCTCAGGAGGTGAC

Downstream 100 bases:

>100_bases
CGCGGCGCTAGCCGCAGCGCCCAAGGCTGATATACTGAGCGCGCGCCGTCGATGCCATGTCGAAAAATGGCAGAGTGACA
GTGCATCCTGAGTGCCCTGG

Product: SpoVR family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 516; Mature: 515

Protein sequence:

>516_residues
MSPSPIATGSDWNFEILTAYEREIARFAKEYRLNTYPNQIEIITSEQMMDAYASVGMPVGYHHWSFGKQFLSVEQAYRRG
QMGLAYELVINSDPCIAYLMEENTLMMQVLVMAHACYGHNSFFKGNYLFRTWTDASAIVDYLVFARKYIAECEERHGVGA
VEQLLDACHALQNYGVDRYKRPSPISSEEEARRQQEREAYLQAQVNALWRTIPEQATPTAQRPDEDGDDPLGLHQHGRYP
AEPQENLLYFLEKNAPLLESWQREVVRIVRKLAQYFYPQRQTQVMNEGWATFWHYTLMNRLYDEGLIDEGTILEFLHSHT
AVIQQPGFDSPHFNGINPYALGFAMFSDIRRICEAPTDEDREWFPDIAGSDWLDTLHFAMRNFKDESFIQQFLSPRVIRD
LKLFSLVDDDRDEMLTISAIHDERGYRRVREALSAQYALSLREPNIQVWEADIRGDRSLTLRHVQDRRRPLGKTLYPVLR
HLHQLWGFPVKLESVEDDEVVRHYQWPLPGDEREGA

Sequences:

>Translated_516_residues
MSPSPIATGSDWNFEILTAYEREIARFAKEYRLNTYPNQIEIITSEQMMDAYASVGMPVGYHHWSFGKQFLSVEQAYRRG
QMGLAYELVINSDPCIAYLMEENTLMMQVLVMAHACYGHNSFFKGNYLFRTWTDASAIVDYLVFARKYIAECEERHGVGA
VEQLLDACHALQNYGVDRYKRPSPISSEEEARRQQEREAYLQAQVNALWRTIPEQATPTAQRPDEDGDDPLGLHQHGRYP
AEPQENLLYFLEKNAPLLESWQREVVRIVRKLAQYFYPQRQTQVMNEGWATFWHYTLMNRLYDEGLIDEGTILEFLHSHT
AVIQQPGFDSPHFNGINPYALGFAMFSDIRRICEAPTDEDREWFPDIAGSDWLDTLHFAMRNFKDESFIQQFLSPRVIRD
LKLFSLVDDDRDEMLTISAIHDERGYRRVREALSAQYALSLREPNIQVWEADIRGDRSLTLRHVQDRRRPLGKTLYPVLR
HLHQLWGFPVKLESVEDDEVVRHYQWPLPGDEREGA
>Mature_515_residues
SPSPIATGSDWNFEILTAYEREIARFAKEYRLNTYPNQIEIITSEQMMDAYASVGMPVGYHHWSFGKQFLSVEQAYRRGQ
MGLAYELVINSDPCIAYLMEENTLMMQVLVMAHACYGHNSFFKGNYLFRTWTDASAIVDYLVFARKYIAECEERHGVGAV
EQLLDACHALQNYGVDRYKRPSPISSEEEARRQQEREAYLQAQVNALWRTIPEQATPTAQRPDEDGDDPLGLHQHGRYPA
EPQENLLYFLEKNAPLLESWQREVVRIVRKLAQYFYPQRQTQVMNEGWATFWHYTLMNRLYDEGLIDEGTILEFLHSHTA
VIQQPGFDSPHFNGINPYALGFAMFSDIRRICEAPTDEDREWFPDIAGSDWLDTLHFAMRNFKDESFIQQFLSPRVIRDL
KLFSLVDDDRDEMLTISAIHDERGYRRVREALSAQYALSLREPNIQVWEADIRGDRSLTLRHVQDRRRPLGKTLYPVLRH
LHQLWGFPVKLESVEDDEVVRHYQWPLPGDEREGA

Specific function: Unknown

COG id: COG2719

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spoVR [H]

Homologues:

Organism=Escherichia coli, GI1787437, Length=493, Percent_Identity=66.7342799188641, Blast_Score=716, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007390 [H]

Pfam domain/function: PF04293 SpoVR [H]

EC number: NA

Molecular weight: Translated: 60277; Mature: 60145

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPSPIATGSDWNFEILTAYEREIARFAKEYRLNTYPNQIEIITSEQMMDAYASVGMPVG
CCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKQFLSVEQAYRRGQMGLAYELVINSDPCIAYLMEENTLMMQVLVMAHACYGHN
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC
SFFKGNYLFRTWTDASAIVDYLVFARKYIAECEERHGVGAVEQLLDACHALQNYGVDRYK
CEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
RPSPISSEEEARRQQEREAYLQAQVNALWRTIPEQATPTAQRPDEDGDDPLGLHQHGRYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEPQENLLYFLEKNAPLLESWQREVVRIVRKLAQYFYPQRQTQVMNEGWATFWHYTLMNR
CCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYDEGLIDEGTILEFLHSHTAVIQQPGFDSPHFNGINPYALGFAMFSDIRRICEAPTDED
HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
REWFPDIAGSDWLDTLHFAMRNFKDESFIQQFLSPRVIRDLKLFSLVDDDRDEMLTISAI
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEH
HDERGYRRVREALSAQYALSLREPNIQVWEADIRGDRSLTLRHVQDRRRPLGKTLYPVLR
HHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHH
HLHQLWGFPVKLESVEDDEVVRHYQWPLPGDEREGA
HHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SPSPIATGSDWNFEILTAYEREIARFAKEYRLNTYPNQIEIITSEQMMDAYASVGMPVG
CCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCCC
YHHWSFGKQFLSVEQAYRRGQMGLAYELVINSDPCIAYLMEENTLMMQVLVMAHACYGHN
CCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHHHCCC
SFFKGNYLFRTWTDASAIVDYLVFARKYIAECEERHGVGAVEQLLDACHALQNYGVDRYK
CEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCC
RPSPISSEEEARRQQEREAYLQAQVNALWRTIPEQATPTAQRPDEDGDDPLGLHQHGRYP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AEPQENLLYFLEKNAPLLESWQREVVRIVRKLAQYFYPQRQTQVMNEGWATFWHYTLMNR
CCCHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
LYDEGLIDEGTILEFLHSHTAVIQQPGFDSPHFNGINPYALGFAMFSDIRRICEAPTDED
HHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
REWFPDIAGSDWLDTLHFAMRNFKDESFIQQFLSPRVIRDLKLFSLVDDDRDEMLTISAI
HHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHCCCCCCEEEEEEH
HDERGYRRVREALSAQYALSLREPNIQVWEADIRGDRSLTLRHVQDRRRPLGKTLYPVLR
HHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHH
HLHQLWGFPVKLESVEDDEVVRHYQWPLPGDEREGA
HHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 7906689 [H]