Definition Chromohalobacter salexigens DSM 3043 chromosome, complete genome.
Accession NC_007963
Length 3,696,649

Click here to switch to the map view.

The map label for this gene is yeaH [C]

Identifier: 92113010

GI number: 92113010

Start: 993209

End: 994489

Strand: Direct

Name: yeaH [C]

Synonym: Csal_0882

Alternate gene names: 92113010

Gene position: 993209-994489 (Clockwise)

Preceding gene: 92113009

Following gene: 92113011

Centisome position: 26.87

GC content: 62.14

Gene sequence:

>1281_bases
ATGACCTACTTCATCGATCGACGCGCCAACGCCAAGAACAAGAGTGCCGTGAATCGCCAGCGTTTCCTGCAACGCTATCG
CAGCCATATCAAGCGAGCGGTGGAGGAAGCGGTCAATCGCCGCTCGATTACCGACATGGAGCGCGGCGAGAAGATCTCGA
TCCCCGCCAAGGACATTTCCGAGCCGGTCTTTCAGCATGGCCCGGGCGGGGCACGCACGATCGTAAGCCCGGGGAACAAG
GAGTTCGTCGAGGGGGATCGCCTGCGTCGGCCGGGCGGCGAAGGGCGCGGCGGTTCGGGCGAGGGAAGTGCGTCCAACCA
GGGCGAGGGCATGGACGAGTTCGCGTTTTCCCTGAGCCGCGAGGAATTTCTCGATTTCGTCTTCGATGGCCTGGCCTTGC
CCCATCTCGAGCGCAAGCAGCTGCGGGATCTCGACGAGGTGCGCCCGGTGCGTGCCGGGGTGACGCGGGACGGCGTGCCG
TCGCGGATCAATATCGTGCGCTCGATGCGCGAGGCGCAGGCGCGCCGCATCGGCATGCGCGCGCCCATCAAGCGTGCTCT
GCGCGAAGCCGAGGAAGCCCTGGAAAGCGAGGAACGCAAGGACCCGGTGCTGCGCAACCCGGCACGAATCGGCGAACTCA
AGGCCGAGATCGAGCGCCTCGAGAAGCGGCTCGAGGCGGTACCGTTCATCGATACCTATGATTTGCGCTACAACAATCTC
ATCGATCAGCCGCAGCCGTCCAACAAGGCGGTGATGTTCTGCGTCATGGACGTTTCCGGCTCCATGACCCAGGGGCACAA
GGATATCGCCAAGCGCTTTTTCCTGTTGCTTTATCTCTTTCTGGAGCGTAACTACGAGAAGGTCGAACTGGTGTTCATAC
GCCACCACACGGCGGCCAAGGAAGTCGATGAAGAGGAATTCTTCTACTCGCGGGAAACCGGCGGAACCATCGTGTCCAGC
GCCTTGACGCTCGTCGACGAGATCATCGCCAAGCGCTACTCGCCGGCGCAGTGGAACCTCTATGTCGCCCAGGCCTCGGA
CGGCGATAACTGGGACGACGACTCGCTGACCTGTCGCGACCTGCTCATGACGTCGCTGATGGCCAAATTGCAGTATTACA
CCTACGTGGAGATCACGCCGCACTCGCACCAGGCCTTGTGGGAAGAATACGAACGCGTACAGGCCGCTCACCCGAGCCGC
TTCGCCATGCAACAGATCGTCGAGCCGGGGGACATCTACCCGGTCTTCCGCAAGCTGTTTCGCAAGCGCGTCGCATCGTG
A

Upstream 100 bases:

>100_bases
GCGCAAGTCCCACTAGGCAGCATGACGTGACCGACGACAGGGGAGCGGGCGGCGTGCGGATGCCGCCTTGCCCTGCGCCC
CGCGCTCACAGGAGGTCGCC

Downstream 100 bases:

>100_bases
CGAGCAAGCTCAGGAGGTGACATGAGTCCATCCCCCATCGCTACCGGCTCCGACTGGAACTTCGAGATCCTGACGGCCTA
CGAGCGTGAAATCGCGCGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNK
EFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVP
SRINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL
IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSS
ALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSR
FAMQQIVEPGDIYPVFRKLFRKRVAS

Sequences:

>Translated_426_residues
MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNK
EFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVP
SRINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL
IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSS
ALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSR
FAMQQIVEPGDIYPVFRKLFRKRVAS
>Mature_425_residues
TYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNKE
FVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPS
RINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNLI
DQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSSA
LTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRF
AMQQIVEPGDIYPVFRKLFRKRVAS

Specific function: Unknown

COG id: COG2718

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0229 family

Homologues:

Organism=Escherichia coli, GI1788084, Length=432, Percent_Identity=54.8611111111111, Blast_Score=477, Evalue=1e-136,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y882_CHRSD (Q1QZ69)

Other databases:

- EMBL:   CP000285
- RefSeq:   YP_572938.1
- STRING:   Q1QZ69
- GeneID:   4027785
- GenomeReviews:   CP000285_GR
- KEGG:   csa:Csal_0882
- NMPDR:   fig|290398.4.peg.762
- eggNOG:   COG2718
- HOGENOM:   HBG313798
- OMA:   IVFIRHT
- ProtClustDB:   PRK05325
- BioCyc:   CSAL290398:CSAL_0882-MONOMER
- HAMAP:   MF_01232
- InterPro:   IPR006698

Pfam domain/function: PF04285 DUF444

EC number: NA

Molecular weight: Translated: 48951; Mature: 48820

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDIS
CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCHHHHH
EPVFQHGPGGARTIVSPGNKEFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSR
HHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPSRINIVRSMREAQARRIGMR
HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
APIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAK
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH
EVDEEEFFYSRETGGTIVSSALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRD
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
LLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRFAMQQIVEPGDIYPVFRKLF
HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
RKRVAS
HHHHCC
>Mature Secondary Structure 
TYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDIS
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCHHHHH
EPVFQHGPGGARTIVSPGNKEFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSR
HHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
EEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPSRINIVRSMREAQARRIGMR
HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCH
APIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC
IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAK
CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH
EVDEEEFFYSRETGGTIVSSALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRD
HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH
LLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRFAMQQIVEPGDIYPVFRKLF
HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH
RKRVAS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA