| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yeaH [C]
Identifier: 92113010
GI number: 92113010
Start: 993209
End: 994489
Strand: Direct
Name: yeaH [C]
Synonym: Csal_0882
Alternate gene names: 92113010
Gene position: 993209-994489 (Clockwise)
Preceding gene: 92113009
Following gene: 92113011
Centisome position: 26.87
GC content: 62.14
Gene sequence:
>1281_bases ATGACCTACTTCATCGATCGACGCGCCAACGCCAAGAACAAGAGTGCCGTGAATCGCCAGCGTTTCCTGCAACGCTATCG CAGCCATATCAAGCGAGCGGTGGAGGAAGCGGTCAATCGCCGCTCGATTACCGACATGGAGCGCGGCGAGAAGATCTCGA TCCCCGCCAAGGACATTTCCGAGCCGGTCTTTCAGCATGGCCCGGGCGGGGCACGCACGATCGTAAGCCCGGGGAACAAG GAGTTCGTCGAGGGGGATCGCCTGCGTCGGCCGGGCGGCGAAGGGCGCGGCGGTTCGGGCGAGGGAAGTGCGTCCAACCA GGGCGAGGGCATGGACGAGTTCGCGTTTTCCCTGAGCCGCGAGGAATTTCTCGATTTCGTCTTCGATGGCCTGGCCTTGC CCCATCTCGAGCGCAAGCAGCTGCGGGATCTCGACGAGGTGCGCCCGGTGCGTGCCGGGGTGACGCGGGACGGCGTGCCG TCGCGGATCAATATCGTGCGCTCGATGCGCGAGGCGCAGGCGCGCCGCATCGGCATGCGCGCGCCCATCAAGCGTGCTCT GCGCGAAGCCGAGGAAGCCCTGGAAAGCGAGGAACGCAAGGACCCGGTGCTGCGCAACCCGGCACGAATCGGCGAACTCA AGGCCGAGATCGAGCGCCTCGAGAAGCGGCTCGAGGCGGTACCGTTCATCGATACCTATGATTTGCGCTACAACAATCTC ATCGATCAGCCGCAGCCGTCCAACAAGGCGGTGATGTTCTGCGTCATGGACGTTTCCGGCTCCATGACCCAGGGGCACAA GGATATCGCCAAGCGCTTTTTCCTGTTGCTTTATCTCTTTCTGGAGCGTAACTACGAGAAGGTCGAACTGGTGTTCATAC GCCACCACACGGCGGCCAAGGAAGTCGATGAAGAGGAATTCTTCTACTCGCGGGAAACCGGCGGAACCATCGTGTCCAGC GCCTTGACGCTCGTCGACGAGATCATCGCCAAGCGCTACTCGCCGGCGCAGTGGAACCTCTATGTCGCCCAGGCCTCGGA CGGCGATAACTGGGACGACGACTCGCTGACCTGTCGCGACCTGCTCATGACGTCGCTGATGGCCAAATTGCAGTATTACA CCTACGTGGAGATCACGCCGCACTCGCACCAGGCCTTGTGGGAAGAATACGAACGCGTACAGGCCGCTCACCCGAGCCGC TTCGCCATGCAACAGATCGTCGAGCCGGGGGACATCTACCCGGTCTTCCGCAAGCTGTTTCGCAAGCGCGTCGCATCGTG A
Upstream 100 bases:
>100_bases GCGCAAGTCCCACTAGGCAGCATGACGTGACCGACGACAGGGGAGCGGGCGGCGTGCGGATGCCGCCTTGCCCTGCGCCC CGCGCTCACAGGAGGTCGCC
Downstream 100 bases:
>100_bases CGAGCAAGCTCAGGAGGTGACATGAGTCCATCCCCCATCGCTACCGGCTCCGACTGGAACTTCGAGATCCTGACGGCCTA CGAGCGTGAAATCGCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 426; Mature: 425
Protein sequence:
>426_residues MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNK EFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVP SRINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSS ALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSR FAMQQIVEPGDIYPVFRKLFRKRVAS
Sequences:
>Translated_426_residues MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNK EFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVP SRINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSS ALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSR FAMQQIVEPGDIYPVFRKLFRKRVAS >Mature_425_residues TYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDISEPVFQHGPGGARTIVSPGNKE FVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSREEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPS RINIVRSMREAQARRIGMRAPIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNLI DQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAKEVDEEEFFYSRETGGTIVSSA LTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRDLLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRF AMQQIVEPGDIYPVFRKLFRKRVAS
Specific function: Unknown
COG id: COG2718
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0229 family
Homologues:
Organism=Escherichia coli, GI1788084, Length=432, Percent_Identity=54.8611111111111, Blast_Score=477, Evalue=1e-136,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y882_CHRSD (Q1QZ69)
Other databases:
- EMBL: CP000285 - RefSeq: YP_572938.1 - STRING: Q1QZ69 - GeneID: 4027785 - GenomeReviews: CP000285_GR - KEGG: csa:Csal_0882 - NMPDR: fig|290398.4.peg.762 - eggNOG: COG2718 - HOGENOM: HBG313798 - OMA: IVFIRHT - ProtClustDB: PRK05325 - BioCyc: CSAL290398:CSAL_0882-MONOMER - HAMAP: MF_01232 - InterPro: IPR006698
Pfam domain/function: PF04285 DUF444
EC number: NA
Molecular weight: Translated: 48951; Mature: 48820
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDIS CCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCHHHHH EPVFQHGPGGARTIVSPGNKEFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSR HHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH EEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPSRINIVRSMREAQARRIGMR HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCH APIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAK CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH EVDEEEFFYSRETGGTIVSSALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRD HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH LLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRFAMQQIVEPGDIYPVFRKLF HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH RKRVAS HHHHCC >Mature Secondary Structure TYFIDRRANAKNKSAVNRQRFLQRYRSHIKRAVEEAVNRRSITDMERGEKISIPAKDIS CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCEECCCHHHHH EPVFQHGPGGARTIVSPGNKEFVEGDRLRRPGGEGRGGSGEGSASNQGEGMDEFAFSLSR HHHHHCCCCCCEEEECCCCCHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH EEFLDFVFDGLALPHLERKQLRDLDEVRPVRAGVTRDGVPSRINIVRSMREAQARRIGMR HHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCH APIKRALREAEEALESEERKDPVLRNPARIGELKAEIERLEKRLEAVPFIDTYDLRYNNL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCC IDQPQPSNKAVMFCVMDVSGSMTQGHKDIAKRFFLLLYLFLERNYEKVELVFIRHHTAAK CCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHH EVDEEEFFYSRETGGTIVSSALTLVDEIIAKRYSPAQWNLYVAQASDGDNWDDDSLTCRD HCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHH LLMTSLMAKLQYYTYVEITPHSHQALWEEYERVQAAHPSRFAMQQIVEPGDIYPVFRKLF HHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHH RKRVAS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA