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The map label for this gene is 92113002

Identifier: 92113002

GI number: 92113002

Start: 982721

End: 983338

Strand: Direct

Name: 92113002

Synonym: Csal_0874

Alternate gene names: NA

Gene position: 982721-983338 (Clockwise)

Preceding gene: 92113001

Following gene: 92113003

Centisome position: 26.58

GC content: 66.5

Gene sequence:

>618_bases
ATGATCAAAGCATTGCGTCGTGCCGGGGACCGGCGGCGTCAGTCGGGCGGGCATCATGCCTGGCGCTTCGAGCCTTACGC
TGGCAGCGAGGTCATTGCCCTGGATTGCGAGACGACCGACCTGGATCCGCGCCAGGCGGATCTGGTGGCGATCGCCGCGG
TCAAGGTTCGCGATGGGCGCGTGCTGACCAGCGAGTCGCTGGACCTGCGCCTGCAGCGTCCGGATAGCCTCTCGAGCGAT
TCCATTCGTATCCACGGGCTGCGCGGTGTCGACCTGCTGGGGGGTGAGGCCTTGGGCGACGCCCTCAATACCCTGCTCGA
CTTCATCGGCAACCGTCCCCTGGTCGGCTGGTGCATCGACTATGATGTGGCGGTGATCAATCGACACTTGCGTCCACGTA
CCGGTTTCGACCTCCCCAACCGTACGATCGACGTGTGCCGGTTATACGCGCGTGAGCGGCGCCGCGCGCAGCCGGATGTC
GAGCCGGATCTACGCTTCGAGGCGATGAGCGAGGCCTTGGGGGTGCCGGTGATGGGCCGGCACACGGCACTGGGCGATGC
GGTGACGACGGCGTTGATGTACCTGCGCCTGTGTCGGGGCCAGGCAGCGAGCGCCTGA

Upstream 100 bases:

>100_bases
GCTGTCTCAGCGGTTTCATCTCGAGTACTGACAGGCCCGCGATGCCTGATGCCGCGCCGCGGTCGGGTATCGCCCCGGAG
CCATGACACGGGAGGTTGTG

Downstream 100 bases:

>100_bases
GTCGCGCGATGCGTGGGCGGTCGCTTCGCCGTACCGGCATGCGGTGGTAGCATAGGCGGCCTCATTCACCACGGCACTCT
AAAGCGCAACCTTCATGCAC

Product: DNA polymerase III subunit epsilon

Products: diphosphate; DNAn+1

Alternate protein names: DNA Polymerase III Epsilon Subunit; Exonuclease RNAse T And DNA Polymerase III; Exonuclease; Exonuclease Superfamily; Exonuclease Family Protein; Exonuclease RNAase T And DNA Polymerase III

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MIKALRRAGDRRRQSGGHHAWRFEPYAGSEVIALDCETTDLDPRQADLVAIAAVKVRDGRVLTSESLDLRLQRPDSLSSD
SIRIHGLRGVDLLGGEALGDALNTLLDFIGNRPLVGWCIDYDVAVINRHLRPRTGFDLPNRTIDVCRLYARERRRAQPDV
EPDLRFEAMSEALGVPVMGRHTALGDAVTTALMYLRLCRGQAASA

Sequences:

>Translated_205_residues
MIKALRRAGDRRRQSGGHHAWRFEPYAGSEVIALDCETTDLDPRQADLVAIAAVKVRDGRVLTSESLDLRLQRPDSLSSD
SIRIHGLRGVDLLGGEALGDALNTLLDFIGNRPLVGWCIDYDVAVINRHLRPRTGFDLPNRTIDVCRLYARERRRAQPDV
EPDLRFEAMSEALGVPVMGRHTALGDAVTTALMYLRLCRGQAASA
>Mature_205_residues
MIKALRRAGDRRRQSGGHHAWRFEPYAGSEVIALDCETTDLDPRQADLVAIAAVKVRDGRVLTSESLDLRLQRPDSLSSD
SIRIHGLRGVDLLGGEALGDALNTLLDFIGNRPLVGWCIDYDVAVINRHLRPRTGFDLPNRTIDVCRLYARERRRAQPDV
EPDLRFEAMSEALGVPVMGRHTALGDAVTTALMYLRLCRGQAASA

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 22711; Mature: 22711

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKALRRAGDRRRQSGGHHAWRFEPYAGSEVIALDCETTDLDPRQADLVAIAAVKVRDGR
CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCHHCEEEEEEEEEECCE
VLTSESLDLRLQRPDSLSSDSIRIHGLRGVDLLGGEALGDALNTLLDFIGNRPLVGWCID
EEECCCCEEEEECCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEC
YDVAVINRHLRPRTGFDLPNRTIDVCRLYARERRRAQPDVEPDLRFEAMSEALGVPVMGR
CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
HTALGDAVTTALMYLRLCRGQAASA
CHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MIKALRRAGDRRRQSGGHHAWRFEPYAGSEVIALDCETTDLDPRQADLVAIAAVKVRDGR
CCHHHHHHHHHHHHCCCCCCEEECCCCCCEEEEEECCCCCCCCCHHCEEEEEEEEEECCE
VLTSESLDLRLQRPDSLSSDSIRIHGLRGVDLLGGEALGDALNTLLDFIGNRPLVGWCID
EEECCCCEEEEECCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHHHCCCCEEEEEEC
YDVAVINRHLRPRTGFDLPNRTIDVCRLYARERRRAQPDVEPDLRFEAMSEALGVPVMGR
CHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCC
HTALGDAVTTALMYLRLCRGQAASA
CHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA