| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112864
Identifier: 92112864
GI number: 92112864
Start: 821857
End: 823686
Strand: Direct
Name: 92112864
Synonym: Csal_0732
Alternate gene names: NA
Gene position: 821857-823686 (Clockwise)
Preceding gene: 92112863
Following gene: 92112868
Centisome position: 22.23
GC content: 38.63
Gene sequence:
>1830_bases ATGAAAAATAGCAATGCGTTGGCCAATCTTTTTTTAGAAAGAAGTAAGTTTCTGTTGATAGGGTTGACGGGAAGAACTGG GTCTGGGTGTACAACTGCAGCGAATATTTTGAGAGAAAAAAATCCTATATTCCCTGAGATTTCTGACCTGAGGTATAAGG GAGAGTCTTTTTATGCGGGGCTGGATGCAAGAAGGTATGATATTGTAAAAAAATATGCTGCGGAAAACTGGAGGCCTTTT TTCTATATTAAAGTCAGTGACTTGATATCTGCTTACTTGATGACATTGACGTTGACGGACCTGTCGAAATTTATTGTCGA GTCATCTACGCACGATGATTTGCGTATATCGGGTGTAAAGAAAAGAATAAGAAATGGAGTTTATAATGATGCCTCAATGA GGCGTCTTCGTATGAAGTTGCCAAGAATATTGTGTGAGAAAAGCTATGAGGTGACCAGAAAGTCAGAGGTTCTTAGAGTT CTAGCTGGGGTGAAAAAATTTACAGAAATTTTCAAGCAGGAGTTGGATGAAATTCAAGCAGGGCTGTATGTAGAAACATA TCAAGCTGCTGGAAATTCAATACGAAAAGTTGGTGCGGTTTCTTCAGAATTCAAGTGCAGACCTTTTGATCCAGATAAGG TTTTTGAACTTCCTAAAGCGATTAATAAATTCATAAAATCCGTCAGGGCTGTTTACGAGGAGTCGTTTATTGTAATTGAT GCCATACGGAACCCATATGAGGCGAGGTTTTTTAAAGATAGATACTCTGCTTTTTACTTGGTGTCTATTAATGCGCCTGA TGAAGATCGGGAGGATTATCTGAGCAGTATTAGGAAGTTTAATAAAGACCAGATAAAAAAGATTGACGATATTGAGTCTG GGAAGTATCCGGTAGAAAATGATGACTTTGTTTCTCAAAATGTAAAGAAATGCATAGAAATTTCAGACATACATCTTTTT AACCCGCGGAATGAGAGAGATAATAATAATATCCTTAAGTCCCAGTTAGCGTGGTATGTGGCGCTTATGGTGCATCCTGG ATTGATTTCTCCTAGTTCGATGGAAAGGGTTATGCAGATTGCTTATACAGCAAAGACTAATTCTGGATGTATATCGAGAC AAGTTGGTGCAGTAGTCACTGATAGTGATTCGTCAATAAAAGCGGTAGGTTGGAATGATGTGCCTCATGGACAAGTGCCT TGCGCTTTACGTAGTGTCGAAGGGGTGATTCGGAGTTTTGATGATGAAGTTTATAGTGAATATGAAAGGAATAATAAAGA GTTTAGGGAAAAGATTATTGAGGTGTCCGGATGGTATGAAGGGGCAGATTTAAAGGGTAGGAATTTATCATACTGTTTCA AAGATGTTAAGAATAGTGTTGACGGAAAAGGTAATCAAGTCCATACGAGGTCATTGCATGCTGAGGAAAATGCTTTTCTT CAGATTTCAAAATATGGAGGCATGAGCGTACAAGGTGGATCATTATTTACTACTGCTAGTCCATGCGAGTTGTGCGCAAA AAAAGCATTTCAATTAGGTGTTGAAAGAATAGTTTATATAGACCCATACCCAGGGATAACAAAAGTACATGTTTTGGCTA ATGGGTCATTAAAGCCAAAATTGGTGCAGTTCAGAGGGGCGGTGGGTAGAGGTTACTTTCAATTATACGAACAAACTTTA CCATACAAGGATGAGCTGGAGTATTTTGAAAATGGTGGCAAGCAAGAGTCTGGTAGGAAAAAGGATATAATGTCAAGTAT TGAGACTCTAGAAAAAGAGGGCTTGATTAATAGCGAAGAGGTTGCGTCTTTTATGGAGAAGATTGGCTGA
Upstream 100 bases:
>100_bases CGTTACAAGCTAAGGCTAAATTTGATTAAGCCGTTGAGGCCGTGGCCGATAGAAGCGTATGAGGAAAAAAATTTATAAAA TCTCTTTTTAAAGGTGAGGT
Downstream 100 bases:
>100_bases GTTTTTTCATGCGGGCATATCTGTGGCTCTTCGCAAGTTAGCATGAAATTGTAGGGTTCATTGAGGGCATTCAGGATAGA GAAACGGCGGTAAATCCAAA
Product: zinc-binding CMP/dCMP deaminase
Products: NA
Alternate protein names: DCMP Deaminase; Cytidine / Deoxycytidylate Deaminase Family Protein; Cytidine/Deoxycytidylate Deaminase; Cytidine/Deoxycytidylate Deaminase Family Protein
Number of amino acids: Translated: 609; Mature: 609
Protein sequence:
>609_residues MKNSNALANLFLERSKFLLIGLTGRTGSGCTTAANILREKNPIFPEISDLRYKGESFYAGLDARRYDIVKKYAAENWRPF FYIKVSDLISAYLMTLTLTDLSKFIVESSTHDDLRISGVKKRIRNGVYNDASMRRLRMKLPRILCEKSYEVTRKSEVLRV LAGVKKFTEIFKQELDEIQAGLYVETYQAAGNSIRKVGAVSSEFKCRPFDPDKVFELPKAINKFIKSVRAVYEESFIVID AIRNPYEARFFKDRYSAFYLVSINAPDEDREDYLSSIRKFNKDQIKKIDDIESGKYPVENDDFVSQNVKKCIEISDIHLF NPRNERDNNNILKSQLAWYVALMVHPGLISPSSMERVMQIAYTAKTNSGCISRQVGAVVTDSDSSIKAVGWNDVPHGQVP CALRSVEGVIRSFDDEVYSEYERNNKEFREKIIEVSGWYEGADLKGRNLSYCFKDVKNSVDGKGNQVHTRSLHAEENAFL QISKYGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVYIDPYPGITKVHVLANGSLKPKLVQFRGAVGRGYFQLYEQTL PYKDELEYFENGGKQESGRKKDIMSSIETLEKEGLINSEEVASFMEKIG
Sequences:
>Translated_609_residues MKNSNALANLFLERSKFLLIGLTGRTGSGCTTAANILREKNPIFPEISDLRYKGESFYAGLDARRYDIVKKYAAENWRPF FYIKVSDLISAYLMTLTLTDLSKFIVESSTHDDLRISGVKKRIRNGVYNDASMRRLRMKLPRILCEKSYEVTRKSEVLRV LAGVKKFTEIFKQELDEIQAGLYVETYQAAGNSIRKVGAVSSEFKCRPFDPDKVFELPKAINKFIKSVRAVYEESFIVID AIRNPYEARFFKDRYSAFYLVSINAPDEDREDYLSSIRKFNKDQIKKIDDIESGKYPVENDDFVSQNVKKCIEISDIHLF NPRNERDNNNILKSQLAWYVALMVHPGLISPSSMERVMQIAYTAKTNSGCISRQVGAVVTDSDSSIKAVGWNDVPHGQVP CALRSVEGVIRSFDDEVYSEYERNNKEFREKIIEVSGWYEGADLKGRNLSYCFKDVKNSVDGKGNQVHTRSLHAEENAFL QISKYGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVYIDPYPGITKVHVLANGSLKPKLVQFRGAVGRGYFQLYEQTL PYKDELEYFENGGKQESGRKKDIMSSIETLEKEGLINSEEVASFMEKIG >Mature_609_residues MKNSNALANLFLERSKFLLIGLTGRTGSGCTTAANILREKNPIFPEISDLRYKGESFYAGLDARRYDIVKKYAAENWRPF FYIKVSDLISAYLMTLTLTDLSKFIVESSTHDDLRISGVKKRIRNGVYNDASMRRLRMKLPRILCEKSYEVTRKSEVLRV LAGVKKFTEIFKQELDEIQAGLYVETYQAAGNSIRKVGAVSSEFKCRPFDPDKVFELPKAINKFIKSVRAVYEESFIVID AIRNPYEARFFKDRYSAFYLVSINAPDEDREDYLSSIRKFNKDQIKKIDDIESGKYPVENDDFVSQNVKKCIEISDIHLF NPRNERDNNNILKSQLAWYVALMVHPGLISPSSMERVMQIAYTAKTNSGCISRQVGAVVTDSDSSIKAVGWNDVPHGQVP CALRSVEGVIRSFDDEVYSEYERNNKEFREKIIEVSGWYEGADLKGRNLSYCFKDVKNSVDGKGNQVHTRSLHAEENAFL QISKYGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVYIDPYPGITKVHVLANGSLKPKLVQFRGAVGRGYFQLYEQTL PYKDELEYFENGGKQESGRKKDIMSSIETLEKEGLINSEEVASFMEKIG
Specific function: Unknown
COG id: COG2131
COG function: function code F; Deoxycytidylate deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69190; Mature: 69190
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSNALANLFLERSKFLLIGLTGRTGSGCTTAANILREKNPIFPEISDLRYKGESFYAG CCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHEECCCHHEEC LDARRYDIVKKYAAENWRPFFYIKVSDLISAYLMTLTLTDLSKFIVESSTHDDLRISGVK CCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KRIRNGVYNDASMRRLRMKLPRILCEKSYEVTRKSEVLRVLAGVKKFTEIFKQELDEIQA HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYVETYQAAGNSIRKVGAVSSEFKCRPFDPDKVFELPKAINKFIKSVRAVYEESFIVID CCEEEEHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AIRNPYEARFFKDRYSAFYLVSINAPDEDREDYLSSIRKFNKDQIKKIDDIESGKYPVEN CCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC DDFVSQNVKKCIEISDIHLFNPRNERDNNNILKSQLAWYVALMVHPGLISPSSMERVMQI CHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AYTAKTNSGCISRQVGAVVTDSDSSIKAVGWNDVPHGQVPCALRSVEGVIRSFDDEVYSE HHHCCCCCCCHHHCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YERNNKEFREKIIEVSGWYEGADLKGRNLSYCFKDVKNSVDGKGNQVHTRSLHAEENAFL HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE QISKYGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVYIDPYPGITKVHVLANGSLKPK EEECCCCCEECCCCEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCH LVQFRGAVGRGYFQLYEQTLPYKDELEYFENGGKQESGRKKDIMSSIETLEKEGLINSEE HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH VASFMEKIG HHHHHHHCC >Mature Secondary Structure MKNSNALANLFLERSKFLLIGLTGRTGSGCTTAANILREKNPIFPEISDLRYKGESFYAG CCCCHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHEECCCHHEEC LDARRYDIVKKYAAENWRPFFYIKVSDLISAYLMTLTLTDLSKFIVESSTHDDLRISGVK CCHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH KRIRNGVYNDASMRRLRMKLPRILCEKSYEVTRKSEVLRVLAGVKKFTEIFKQELDEIQA HHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLYVETYQAAGNSIRKVGAVSSEFKCRPFDPDKVFELPKAINKFIKSVRAVYEESFIVID CCEEEEHHHCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE AIRNPYEARFFKDRYSAFYLVSINAPDEDREDYLSSIRKFNKDQIKKIDDIESGKYPVEN CCCCCHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCC DDFVSQNVKKCIEISDIHLFNPRNERDNNNILKSQLAWYVALMVHPGLISPSSMERVMQI CHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH AYTAKTNSGCISRQVGAVVTDSDSSIKAVGWNDVPHGQVPCALRSVEGVIRSFDDEVYSE HHHCCCCCCCHHHCCCEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH YERNNKEFREKIIEVSGWYEGADLKGRNLSYCFKDVKNSVDGKGNQVHTRSLHAEENAFL HHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEE QISKYGGMSVQGGSLFTTASPCELCAKKAFQLGVERIVYIDPYPGITKVHVLANGSLKPK EEECCCCCEECCCCEEECCCHHHHHHHHHHHHCCCEEEEECCCCCCEEEEEEECCCCCCH LVQFRGAVGRGYFQLYEQTLPYKDELEYFENGGKQESGRKKDIMSSIETLEKEGLINSEE HHHHHCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHH VASFMEKIG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA