| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is 92112843
Identifier: 92112843
GI number: 92112843
Start: 798293
End: 798973
Strand: Direct
Name: 92112843
Synonym: Csal_0711
Alternate gene names: NA
Gene position: 798293-798973 (Clockwise)
Preceding gene: 92112840
Following gene: 92112844
Centisome position: 21.6
GC content: 61.38
Gene sequence:
>681_bases ATGGTGACTTCCAATCCGTTTTCGGCGTTGTTCGGACGATCGCCTTTCGAGCCCTTGCTCGCGCATATCGTCAAGACTAG CGAGTGCGCCGAACGACTCTTGCCGTTTTTCGATGCCACGCAGGCGGGCAACTGGGACGAGGCCGCCACGCATCGCGAAG CGATCACCGAACTCGAGCACGAGGCCGATACGCTCAAGACCGAGCTGCGCCTCAACCTTCCCAACACCATGTTTCTGCCG GTCTCGCGCTCCGACCTGCTGGAGTTGATCAGCGTACAGGACAAGATCGCCAACAAGGCGCGCGACATCACCGGCATCAT GCTGGGCCGCGAAATGCAGATCCCGGCCTCGCTGGCACCGGCGATGCGGGCGTATCTGGAAACCGCCATCGCCACCGTCA GCCAGGCTCGCAAGGCGCTCGAGGAACTCGAGGAGCTGCTCGAGTCGGGTTTCGGGCGCAACGTCTCGGATGTCATGCAC GATTTCATCCGCGAGCTCCACGAACTCGAGCACAAAGCCGACGATCAGCAAGTGCAGATTCGCCGCCAGCTCTTCCAGCT GGAAGCCGAGCTGCCACCGGTCGACGTGATCTTTCTCTACAAGATCATCGAGTGGATCGGTGAGCTGTCCGATCGCGCCG AGCGCGTCGGCAGTCGTCTTCAAATCCTCACGGCCCGCTAA
Upstream 100 bases:
>100_bases GTCCTGTTGCGTTGATGACAAGGGGATGAATTTTCCATGACGCGAAGGGGTGCAGTCACTATACTGACGCCGCCATTCCC AACGCATCGAATCTGACATT
Downstream 100 bases:
>100_bases GACGGGCCGTGTGATTTTTCGTCTCACGCCAGCCAGATAGAACTTGCCTATGTCCATCATTGCGCAATACGGCGATGTCT TCATCATTCTCGCCTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MVTSNPFSALFGRSPFEPLLAHIVKTSECAERLLPFFDATQAGNWDEAATHREAITELEHEADTLKTELRLNLPNTMFLP VSRSDLLELISVQDKIANKARDITGIMLGREMQIPASLAPAMRAYLETAIATVSQARKALEELEELLESGFGRNVSDVMH DFIRELHELEHKADDQQVQIRRQLFQLEAELPPVDVIFLYKIIEWIGELSDRAERVGSRLQILTAR
Sequences:
>Translated_226_residues MVTSNPFSALFGRSPFEPLLAHIVKTSECAERLLPFFDATQAGNWDEAATHREAITELEHEADTLKTELRLNLPNTMFLP VSRSDLLELISVQDKIANKARDITGIMLGREMQIPASLAPAMRAYLETAIATVSQARKALEELEELLESGFGRNVSDVMH DFIRELHELEHKADDQQVQIRRQLFQLEAELPPVDVIFLYKIIEWIGELSDRAERVGSRLQILTAR >Mature_226_residues MVTSNPFSALFGRSPFEPLLAHIVKTSECAERLLPFFDATQAGNWDEAATHREAITELEHEADTLKTELRLNLPNTMFLP VSRSDLLELISVQDKIANKARDITGIMLGREMQIPASLAPAMRAYLETAIATVSQARKALEELEELLESGFGRNVSDVMH DFIRELHELEHKADDQQVQIRRQLFQLEAELPPVDVIFLYKIIEWIGELSDRAERVGSRLQILTAR
Specific function: Unknown
COG id: COG1392
COG function: function code P; Phosphate transport regulator (distant homolog of PhoU)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0111 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002727 - InterPro: IPR018445 [H]
Pfam domain/function: PF01865 PhoU_div [H]
EC number: NA
Molecular weight: Translated: 25620; Mature: 25620
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTSNPFSALFGRSPFEPLLAHIVKTSECAERLLPFFDATQAGNWDEAATHREAITELEH CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EADTLKTELRLNLPNTMFLPVSRSDLLELISVQDKIANKARDITGIMLGREMQIPASLAP HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AMRAYLETAIATVSQARKALEELEELLESGFGRNVSDVMHDFIRELHELEHKADDQQVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RRQLFQLEAELPPVDVIFLYKIIEWIGELSDRAERVGSRLQILTAR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVTSNPFSALFGRSPFEPLLAHIVKTSECAERLLPFFDATQAGNWDEAATHREAITELEH CCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH EADTLKTELRLNLPNTMFLPVSRSDLLELISVQDKIANKARDITGIMLGREMQIPASLAP HHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH AMRAYLETAIATVSQARKALEELEELLESGFGRNVSDVMHDFIRELHELEHKADDQQVQI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH RRQLFQLEAELPPVDVIFLYKIIEWIGELSDRAERVGSRLQILTAR HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]