| Definition | Chromohalobacter salexigens DSM 3043 chromosome, complete genome. |
|---|---|
| Accession | NC_007963 |
| Length | 3,696,649 |
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The map label for this gene is yaeT [H]
Identifier: 92112704
GI number: 92112704
Start: 633134
End: 635506
Strand: Direct
Name: yaeT [H]
Synonym: Csal_0571
Alternate gene names: 92112704
Gene position: 633134-635506 (Clockwise)
Preceding gene: 92112703
Following gene: 92112705
Centisome position: 17.13
GC content: 62.66
Gene sequence:
>2373_bases ATGAGCGGGCGGACTCGAGAGAAGCGAATCGACTGCATGAAGATCAAGACCATCGGATTGGCGGCGCTGCTGCTGACCGC GGCTCCCGCGGCGCTGGCGGCCCCCTTCGAGATTTCAGACATTCGCGTGGAAGGGCTGCAGCGCGTTTCGCCGGCATCGG TGTTCAACGCCTTTCCGGTCAGTGCCCACGAGACGGTCGATGACCGTGAACTGGCGGAGGCGTCGCAGCAGCTTTTCGAC ACCGGCCTGTTCGACGACATCGAGCTGTTGCGCGACGGTGACGTGTTGATCGTCAATGTGGTCGAGCGCCCCACGATCGC CTCCATCGAACTCGACGGCAACTCCCAGGTGTCCGACGACGATCTGCGCAAGGGCATGACCGAGGCCGGGCTCGCCGAGG GGCAGGTGCTGCAGCGTTCGACGCTGGACGAGGTGCAGCGTGAGCTGGAACGGCTCTACCAATCCCAGGGACGTTACAGC GCCAGCATCGACACCAACGTCGAAGAACTCGACAACAATCGGGTCGAAGTCGATATCGACATCAACGAAGGGGCCGTCGC CAAGATCCAGAAGATCAACTTCGTCGGCAACCAGGATTTCGACGACGAGACCCTGCGTGATCTGTTCGCGCTGGAAGACA AGCCCGGCTGGTTCCTGGGCTGGTTCTCCGACGACGAATACTCGCGCGACAAGCTCTCCGGCGACCTCGAGACGCTGCGC TCCTTCTACCTGGACCGGGGCTACGTCAATTTCGACATCCGCTCGTCGCAGGTGTCGATCAGTCCCGACAAGTCCAAGAT CTTCATCACCATCAACGTCGACGAGGGCCAGCGCTACAAGCTCGACGAGATTCGCTTCGCCGGTGACTTGAAGATCGGCG AGGACAAGGCACGCGAGCTGGTGACGGCCACGCCCGGCGAATATTATTCGCAAAGCGCCATGACCGAATCCGCCGAGGCC CTGCGTCAGCGCCTCGGCGCCGAAGGTTTCGCCTTCGCCGAGGTCGACAGCGTGCCCGAGACCGATGCCCAGGACGGCAC CGTGGACGTGACCTTCCGTGTCGAGCCGGGGCGGCGCGCCTATGTGCGGCGCATCAACTTCGTCGGCAATACCACCACCC AGGACGAGGTGCTGCGCCGCGAGATGACCCAGATGGAAGGGGCGCCGGCGTCCACCGACCAGATCAGCCAGTCCCGCGAG CGTCTTGAGCGTCTCGGGTTCTTCCGTACGGTCGATGTGGAAACCCGGCCCGTCGCCGATCATCCCGACCAGCTCGATGT CACCTACAACGTCGAGGAGCAGCCCTCCGGTTCGGTGTCGGCCAGCCTGGGGTATTCGCAAAGCGCCGGTGTCATCTACG GGGCCGCCTTGTCCCAGAACAACTTCCTGGGAACCGGCAATCGCGTCAACGTGAATGCCCAGAAGGGGGATTACTTCACG AACCTCAACTTCGGGTTCACCGATCCCTACTGGACGCTGGACGGCATCTCGCGGGGCTATAACGTCTACTACCGCGAAAC GGACTACGAGGACTTCGACGATATCTCGACGTACTCCTCCGACGCGCTGGGCGGCAGCATCAACTTCGGGTATCCGATCA ACGAGCTCTCGCGCCTCAACTTCGGCGTCGGGGTCGAGGATCTGTCGCTCGAGACCTACCGTGATACGCCGGCCGAGATC ATCCAGTACACGGAAGACGAGGGCGAGGACTTCCTGAACTACAAGCTCACCGCCCGCTGGACGCGCAACAATCTCAACCG CGGCATCATGCCGACGGCGGGGAGCTATCAGCGCTTGTCGCTGGAAGCCGCCGTGCCGGGCAGTGACACGCAGTACTACA AGACTCGCTACGAGGCACAGAAGCTGTTCGAGTTCCGTCCCGAGTGGTCGCTGAAGTTCAGTACCAACCTGGGCTATGCG GATACCGTCGGTGACGATGCCTATCCGTTTTACGAGAACTTCTACTCGGGCGGCCTGGGCTCGGTGCGCGGTTTCTCCAG CAACACGCTGGGCCCCAACACGACACCGCGGAACGACGGCGACGACGATACCCTGGGGGGCAACGTGCTCGTCGAGGGCT CGGCCGAGCTGATCTATCCGTTCCCGTGGGTCGAGGATCGCCGCTCGCTGCAGACCAGCGTGTTCTTCGACGCGGGCAAC ACGTACCTGACCGAATGCTACGACGTGCCGGCAGGCAGCACCTCCAACTGCAGCAGTGGTGTCGATCTTGGCGAGTTGCG TTACAGCGTGGGGCTGGGGCTGTCCTGGCTGACGCCGGTGGGGCCGTTGACCTTCAGCGTCGCCAAGCCGATCAGCGACG AAGACGGCGATGACACGCAGGTCTTTCAGTTCTCGCTGGGTCAGACCTTCTAA
Upstream 100 bases:
>100_bases TAAGCGGTCGTTGACCGCAAGGATGAGCGACCCGGGGGAACGTGGCGAGGGGAGTACGGCCTTGCCAGTCGCCCAGGGAA ATGTATAAGGTGCCTGTTCC
Downstream 100 bases:
>100_bases CCAGGCTGACACAGCGTCGTGCGACCGGTGCGATGATGTGGTCATCGCACCGAGTGACCATAACGAATCAAGGAGAGGGT GTGATGCGCAAATTGACGGG
Product: surface antigen (D15)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MSGRTREKRIDCMKIKTIGLAALLLTAAPAALAAPFEISDIRVEGLQRVSPASVFNAFPVSAHETVDDRELAEASQQLFD TGLFDDIELLRDGDVLIVNVVERPTIASIELDGNSQVSDDDLRKGMTEAGLAEGQVLQRSTLDEVQRELERLYQSQGRYS ASIDTNVEELDNNRVEVDIDINEGAVAKIQKINFVGNQDFDDETLRDLFALEDKPGWFLGWFSDDEYSRDKLSGDLETLR SFYLDRGYVNFDIRSSQVSISPDKSKIFITINVDEGQRYKLDEIRFAGDLKIGEDKARELVTATPGEYYSQSAMTESAEA LRQRLGAEGFAFAEVDSVPETDAQDGTVDVTFRVEPGRRAYVRRINFVGNTTTQDEVLRREMTQMEGAPASTDQISQSRE RLERLGFFRTVDVETRPVADHPDQLDVTYNVEEQPSGSVSASLGYSQSAGVIYGAALSQNNFLGTGNRVNVNAQKGDYFT NLNFGFTDPYWTLDGISRGYNVYYRETDYEDFDDISTYSSDALGGSINFGYPINELSRLNFGVGVEDLSLETYRDTPAEI IQYTEDEGEDFLNYKLTARWTRNNLNRGIMPTAGSYQRLSLEAAVPGSDTQYYKTRYEAQKLFEFRPEWSLKFSTNLGYA DTVGDDAYPFYENFYSGGLGSVRGFSSNTLGPNTTPRNDGDDDTLGGNVLVEGSAELIYPFPWVEDRRSLQTSVFFDAGN TYLTECYDVPAGSTSNCSSGVDLGELRYSVGLGLSWLTPVGPLTFSVAKPISDEDGDDTQVFQFSLGQTF
Sequences:
>Translated_790_residues MSGRTREKRIDCMKIKTIGLAALLLTAAPAALAAPFEISDIRVEGLQRVSPASVFNAFPVSAHETVDDRELAEASQQLFD TGLFDDIELLRDGDVLIVNVVERPTIASIELDGNSQVSDDDLRKGMTEAGLAEGQVLQRSTLDEVQRELERLYQSQGRYS ASIDTNVEELDNNRVEVDIDINEGAVAKIQKINFVGNQDFDDETLRDLFALEDKPGWFLGWFSDDEYSRDKLSGDLETLR SFYLDRGYVNFDIRSSQVSISPDKSKIFITINVDEGQRYKLDEIRFAGDLKIGEDKARELVTATPGEYYSQSAMTESAEA LRQRLGAEGFAFAEVDSVPETDAQDGTVDVTFRVEPGRRAYVRRINFVGNTTTQDEVLRREMTQMEGAPASTDQISQSRE RLERLGFFRTVDVETRPVADHPDQLDVTYNVEEQPSGSVSASLGYSQSAGVIYGAALSQNNFLGTGNRVNVNAQKGDYFT NLNFGFTDPYWTLDGISRGYNVYYRETDYEDFDDISTYSSDALGGSINFGYPINELSRLNFGVGVEDLSLETYRDTPAEI IQYTEDEGEDFLNYKLTARWTRNNLNRGIMPTAGSYQRLSLEAAVPGSDTQYYKTRYEAQKLFEFRPEWSLKFSTNLGYA DTVGDDAYPFYENFYSGGLGSVRGFSSNTLGPNTTPRNDGDDDTLGGNVLVEGSAELIYPFPWVEDRRSLQTSVFFDAGN TYLTECYDVPAGSTSNCSSGVDLGELRYSVGLGLSWLTPVGPLTFSVAKPISDEDGDDTQVFQFSLGQTF >Mature_789_residues SGRTREKRIDCMKIKTIGLAALLLTAAPAALAAPFEISDIRVEGLQRVSPASVFNAFPVSAHETVDDRELAEASQQLFDT GLFDDIELLRDGDVLIVNVVERPTIASIELDGNSQVSDDDLRKGMTEAGLAEGQVLQRSTLDEVQRELERLYQSQGRYSA SIDTNVEELDNNRVEVDIDINEGAVAKIQKINFVGNQDFDDETLRDLFALEDKPGWFLGWFSDDEYSRDKLSGDLETLRS FYLDRGYVNFDIRSSQVSISPDKSKIFITINVDEGQRYKLDEIRFAGDLKIGEDKARELVTATPGEYYSQSAMTESAEAL RQRLGAEGFAFAEVDSVPETDAQDGTVDVTFRVEPGRRAYVRRINFVGNTTTQDEVLRREMTQMEGAPASTDQISQSRER LERLGFFRTVDVETRPVADHPDQLDVTYNVEEQPSGSVSASLGYSQSAGVIYGAALSQNNFLGTGNRVNVNAQKGDYFTN LNFGFTDPYWTLDGISRGYNVYYRETDYEDFDDISTYSSDALGGSINFGYPINELSRLNFGVGVEDLSLETYRDTPAEII QYTEDEGEDFLNYKLTARWTRNNLNRGIMPTAGSYQRLSLEAAVPGSDTQYYKTRYEAQKLFEFRPEWSLKFSTNLGYAD TVGDDAYPFYENFYSGGLGSVRGFSSNTLGPNTTPRNDGDDDTLGGNVLVEGSAELIYPFPWVEDRRSLQTSVFFDAGNT YLTECYDVPAGSTSNCSSGVDLGELRYSVGLGLSWLTPVGPLTFSVAKPISDEDGDDTQVFQFSLGQTF
Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]
COG id: COG4775
COG function: function code M; Outer membrane protein/protective antigen OMA87
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the surface antigen D15 family [H]
Homologues:
Organism=Escherichia coli, GI1786374, Length=816, Percent_Identity=38.9705882352941, Blast_Score=567, Evalue=1e-163,
Paralogues:
None
Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000184 - InterPro: IPR016474 - InterPro: IPR010827 [H]
Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]
EC number: NA
Molecular weight: Translated: 87945; Mature: 87814
Theoretical pI: Translated: 4.08; Mature: 4.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRTREKRIDCMKIKTIGLAALLLTAAPAALAAPFEISDIRVEGLQRVSPASVFNAFPV CCCCCCHHCCCEEEEHHHHHHHHHHHHCHHHHCCCCEECHHHHHHHHCCCHHHHHHCCCC SAHETVDDRELAEASQQLFDTGLFDDIELLRDGDVLIVNVVERPTIASIELDGNSQVSDD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCHH DLRKGMTEAGLAEGQVLQRSTLDEVQRELERLYQSQGRYSASIDTNVEELDNNRVEVDID HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCEEEEEEE INEGAVAKIQKINFVGNQDFDDETLRDLFALEDKPGWFLGWFSDDEYSRDKLSGDLETLR CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCHHHHHH SFYLDRGYVNFDIRSSQVSISPDKSKIFITINVDEGQRYKLDEIRFAGDLKIGEDKAREL HHHHCCCEEEEEEECCEEEECCCCCEEEEEEECCCCCCEEHHHEEEECCCEECCHHHHHE VTATPGEYYSQSAMTESAEALRQRLGAEGFAFAEVDSVPETDAQDGTVDVTFRVEPGRRA EECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEE YVRRINFVGNTTTQDEVLRREMTQMEGAPASTDQISQSRERLERLGFFRTVDVETRPVAD EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC HPDQLDVTYNVEEQPSGSVSASLGYSQSAGVIYGAALSQNNFLGTGNRVNVNAQKGDYFT CCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCEECCCCEEEEECCCCCEEE NLNFGFTDPYWTLDGISRGYNVYYRETDYEDFDDISTYSSDALGGSINFGYPINELSRLN ECCCCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCHHHHHHCC FGVGVEDLSLETYRDTPAEIIQYTEDEGEDFLNYKLTARWTRNNLNRGIMPTAGSYQRLS CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEE LEAAVPGSDTQYYKTRYEAQKLFEFRPEWSLKFSTNLGYADTVGDDAYPFYENFYSGGLG EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC SVRGFSSNTLGPNTTPRNDGDDDTLGGNVLVEGSAELIYPFPWVEDRRSLQTSVFFDAGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHCCEEEEEEECCC TYLTECYDVPAGSTSNCSSGVDLGELRYSVGLGLSWLTPVGPLTFSVAKPISDEDGDDTQ CEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCE VFQFSLGQTF EEEEECCCCC >Mature Secondary Structure SGRTREKRIDCMKIKTIGLAALLLTAAPAALAAPFEISDIRVEGLQRVSPASVFNAFPV CCCCCHHCCCEEEEHHHHHHHHHHHHCHHHHCCCCEECHHHHHHHHCCCHHHHHHCCCC SAHETVDDRELAEASQQLFDTGLFDDIELLRDGDVLIVNVVERPTIASIELDGNSQVSDD CCCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEEECCCEEEEEEECCCCCCCHH DLRKGMTEAGLAEGQVLQRSTLDEVQRELERLYQSQGRYSASIDTNVEELDNNRVEVDID HHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHCCCEEEEEEE INEGAVAKIQKINFVGNQDFDDETLRDLFALEDKPGWFLGWFSDDEYSRDKLSGDLETLR CCCCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCHHHHHH SFYLDRGYVNFDIRSSQVSISPDKSKIFITINVDEGQRYKLDEIRFAGDLKIGEDKAREL HHHHCCCEEEEEEECCEEEECCCCCEEEEEEECCCCCCEEHHHEEEECCCEECCHHHHHE VTATPGEYYSQSAMTESAEALRQRLGAEGFAFAEVDSVPETDAQDGTVDVTFRVEPGRRA EECCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEEEEEECCCCEE YVRRINFVGNTTTQDEVLRREMTQMEGAPASTDQISQSRERLERLGFFRTVDVETRPVAD EEEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC HPDQLDVTYNVEEQPSGSVSASLGYSQSAGVIYGAALSQNNFLGTGNRVNVNAQKGDYFT CCCCEEEEEECCCCCCCCEEEECCCCCCCCEEEEEEECCCCEECCCCEEEEECCCCCEEE NLNFGFTDPYWTLDGISRGYNVYYRETDYEDFDDISTYSSDALGGSINFGYPINELSRLN ECCCCCCCCCEECCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCEECCCCHHHHHHCC FGVGVEDLSLETYRDTPAEIIQYTEDEGEDFLNYKLTARWTRNNLNRGIMPTAGSYQRLS CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEE LEAAVPGSDTQYYKTRYEAQKLFEFRPEWSLKFSTNLGYADTVGDDAYPFYENFYSGGLG EEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHCCCCC SVRGFSSNTLGPNTTPRNDGDDDTLGGNVLVEGSAELIYPFPWVEDRRSLQTSVFFDAGN CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCHHHHCCEEEEEEECCC TYLTECYDVPAGSTSNCSSGVDLGELRYSVGLGLSWLTPVGPLTFSVAKPISDEDGDDTQ CEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHCCCCCCEEEEECCCCCCCCCCCE VFQFSLGQTF EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA