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The map label for this gene is 92112705

Identifier: 92112705

GI number: 92112705

Start: 635590

End: 636093

Strand: Direct

Name: 92112705

Synonym: Csal_0572

Alternate gene names: NA

Gene position: 635590-636093 (Clockwise)

Preceding gene: 92112704

Following gene: 92112706

Centisome position: 17.19

GC content: 61.11

Gene sequence:

>504_bases
ATGCGCAAATTGACGGGTGCCCTGTGTCTCGGGGTGATGAGCGTGCTGTCCATGCCGGCCATGGCGACCGAGGTCGGCGT
GCTCGACTGGCGTCAGGCCTTGCTGGATTCGGATGCTGCGCAGCGCTCGATGAACGAGCTCAAGAATCAGATCAGTTCTC
AGCAGCAGCGTGCGGAGTCCCTGAGTCAGGAACTGCAGCAGCTGCAGCAAAAGCTGCAGCAGGATGGCGCGGTGATGTCC
GAGTCGGAACGCACCAGCGCGCAGCAGGAACTGCGTCAGAAGGGCTCCGAGTTCCAGCAACTGCGTCAGCAGATCCAGCG
TGCGCAGCAGGAAAAGGAACAGGCGTTCATGCAGTCCGCCAAGCCCAAGCTTGACCGCGCCATCGACCAGGTCGTCGCGC
AGCATGATCTGGATGTCATCGTGGATCGCGACGCGGTGGTGTTCTCGGAAGACGGGCTCGACGTCACCGAGGAAGTCACT
CGCATCTTTAACTCGCTCAACTGA

Upstream 100 bases:

>100_bases
TGGGTCAGACCTTCTAACCAGGCTGACACAGCGTCGTGCGACCGGTGCGATGATGTGGTCATCGCACCGAGTGACCATAA
CGAATCAAGGAGAGGGTGTG

Downstream 100 bases:

>100_bases
GCCCACCGGGCGCCGCGAGCGCCCATGGCTAGCGATTCCAAGCGCACATGAAGACCCTTACTCCCTGCGCCTTCACGCTC
GGTGAACTGGCCGAGCGTCT

Product: outer membrane chaperone Skp

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRKLTGALCLGVMSVLSMPAMATEVGVLDWRQALLDSDAAQRSMNELKNQISSQQQRAESLSQELQQLQQKLQQDGAVMS
ESERTSAQQELRQKGSEFQQLRQQIQRAQQEKEQAFMQSAKPKLDRAIDQVVAQHDLDVIVDRDAVVFSEDGLDVTEEVT
RIFNSLN

Sequences:

>Translated_167_residues
MRKLTGALCLGVMSVLSMPAMATEVGVLDWRQALLDSDAAQRSMNELKNQISSQQQRAESLSQELQQLQQKLQQDGAVMS
ESERTSAQQELRQKGSEFQQLRQQIQRAQQEKEQAFMQSAKPKLDRAIDQVVAQHDLDVIVDRDAVVFSEDGLDVTEEVT
RIFNSLN
>Mature_167_residues
MRKLTGALCLGVMSVLSMPAMATEVGVLDWRQALLDSDAAQRSMNELKNQISSQQQRAESLSQELQQLQQKLQQDGAVMS
ESERTSAQQELRQKGSEFQQLRQQIQRAQQEKEQAFMQSAKPKLDRAIDQVVAQHDLDVIVDRDAVVFSEDGLDVTEEVT
RIFNSLN

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005632 [H]

Pfam domain/function: PF03938 OmpH [H]

EC number: NA

Molecular weight: Translated: 18848; Mature: 18848

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKLTGALCLGVMSVLSMPAMATEVGVLDWRQALLDSDAAQRSMNELKNQISSQQQRAES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LSQELQQLQQKLQQDGAVMSESERTSAQQELRQKGSEFQQLRQQIQRAQQEKEQAFMQSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPKLDRAIDQVVAQHDLDVIVDRDAVVFSEDGLDVTEEVTRIFNSLN
CHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRKLTGALCLGVMSVLSMPAMATEVGVLDWRQALLDSDAAQRSMNELKNQISSQQQRAES
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LSQELQQLQQKLQQDGAVMSESERTSAQQELRQKGSEFQQLRQQIQRAQQEKEQAFMQSA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KPKLDRAIDQVVAQHDLDVIVDRDAVVFSEDGLDVTEEVTRIFNSLN
CHHHHHHHHHHHHHHCHHHHCCCCCEEECCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]