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The map label for this gene is fliD [H]

Identifier: 92112639

GI number: 92112639

Start: 562851

End: 564176

Strand: Direct

Name: fliD [H]

Synonym: Csal_0506

Alternate gene names: 92112639

Gene position: 562851-564176 (Clockwise)

Preceding gene: 92112638

Following gene: 92112641

Centisome position: 15.23

GC content: 60.03

Gene sequence:

>1326_bases
ATGGCTTCCATCGCGTCACTGGGTGTTGGTTCAGGACTTGATCTCAATGGCCTGCTGGACCAGCTCCAAGAAGCCGAGCA
ACAGAAGCTCGTGCCCATCCGACAGCAGCAGGCCGATCAAGATGCAAAGATCTCCGCCTATGGTCAGCTGCAGGGAGCGC
TGTCGAAGGTCCAGTCTTCGGCCAGCAATCTCAACGATCCTGAACTCTTCAACAGTGTGACCAGCGATGTCGAGGGCGAC
AGCGTAAGTGCCGCCGCGACGCCCGATGCGCCGCCTGGGCGCTATGACGTGGACGTCACACAGTTGGCCACGGCATCGAG
CATTGCCACCCAGGGCGTCGATGAAGAAGCGGTGCTCAATGCGGGCGCCGAGGCGAGCCTGGATGTCACGCTGAATGACG
GGACGGCGCAGAACATTACGGTAGAGGCGGATAGCACACTAAGTGATGTGCGCGATGCCATCAACGCAAGCGATTCAGGG
GTCTCGGCCTCGATCGTGTTCGATGGGTCGCAGAGCCGGCTGGCAATAGCTTCCGAGTCAACGGGGGCGGAAGCCGGTAT
CAATAGCGTCACCTTCAATGGTCTCGATGGCTTGGCGCTGGATACCGCGACGGAAATCCAGGGACAGGATGCCAAGCTGG
ACGTCAACGGCATCGCCATCACGAGTGACAGCAATCAGGTCGAAGAGGCCATCCAGGGCACCACGCTGAGCCTGTCGGAA
ACCGGGCAGTCCACGGTCACGGTGGAACGTGACGACGGTGCCATCCGCGATGCCATCACAGGGTTCGTCGACAGCTATAA
CAGCATGAAATCCACGGCGGATGACTTGACCAGCTTCGATGCCGAAAGCGGCGATGCCGGAGAGTTGCTGGGCGATGGGA
CGACCCGCATGGCGGAAACGCAGTTGCGGAGTACCTTGGCCTCGAGCGTCGAGGGCGACGGCCTGAACACCCTGAGCGAC
ATCGGCATTTCGATGAATGTCGACGGTGAGCTGGAAGTCGACGACGAGAAACTCGACGATGTGATGGCGAACCAGCCTGG
CGAGTTGCAGGCCTTGTTCACGGGAACCGGCGACACGGTGGGCATTGCAGGACGGGCCGAGGAAGAGCTGGACACCATGC
TTGGTGACAACGGGATGGTAGAGAATGCCGTGACCGGTGCCGAGGAGCAGATGGCTCGTCTCGACGAGCGTTATTCCTCG
ATGCAAGACAGTATCTCGAGCACGGTGGATCGTTATCGTACCCAGTTCCAGGAGCTCGATAGCATGGTGGCCGAGATGAA
TCAGACCAGCAGTTACCTCACCCAGCAGTTGTCTGCCCTGGGCTAG

Upstream 100 bases:

>100_bases
TTTCTTCTTCCTCGGCACATGAGTGATTTGCTAGGGTGAGGCACAGACATCAGCAGACGTATGCTTGCGATGACACGCAC
CTGACAAGGGAAGAGGTGGT

Downstream 100 bases:

>100_bases
ACGCTAGCCTGATGTCAGCAATGTAACCGGCCCGGCGCCCGCCTCAGTGCGGGCGCCTTGGTTTGTGCGGGATGCTCCGC
CCAATAGCTGCCGAGGCCTT

Product: flagellar hook-associated 2-like protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSSASNLNDPELFNSVTSDVEGD
SVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLNAGAEASLDVTLNDGTAQNITVEADSTLSDVRDAINASDSG
VSASIVFDGSQSRLAIASESTGAEAGINSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQVEEAIQGTTLSLSE
TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSFDAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSD
IGISMNVDGELEVDDEKLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDERYSS
MQDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQLSALG

Sequences:

>Translated_441_residues
MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSSASNLNDPELFNSVTSDVEGD
SVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLNAGAEASLDVTLNDGTAQNITVEADSTLSDVRDAINASDSG
VSASIVFDGSQSRLAIASESTGAEAGINSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQVEEAIQGTTLSLSE
TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSFDAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSD
IGISMNVDGELEVDDEKLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDERYSS
MQDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQLSALG
>Mature_440_residues
ASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSSASNLNDPELFNSVTSDVEGDS
VSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLNAGAEASLDVTLNDGTAQNITVEADSTLSDVRDAINASDSGV
SASIVFDGSQSRLAIASESTGAEAGINSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQVEEAIQGTTLSLSET
GQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSFDAESGDAGELLGDGTTRMAETQLRSTLASSVEGDGLNTLSDI
GISMNVDGELEVDDEKLDDVMANQPGELQALFTGTGDTVGIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDERYSSM
QDSISSTVDRYRTQFQELDSMVAEMNQTSSYLTQQLSALG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=462, Percent_Identity=35.9307359307359, Blast_Score=230, Evalue=1e-61,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 45813; Mature: 45682

Theoretical pI: Translated: 3.50; Mature: 3.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ASNLNDPELFNSVTSDVEGDSVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLN
HCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHC
AGAEASLDVTLNDGTAQNITVEADSTLSDVRDAINASDSGVSASIVFDGSQSRLAIASES
CCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCC
TGAEAGINSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQVEEAIQGTTLSLSE
CCCCCCCCCEEECCCCCCEECCHHHCCCCCCEEEECEEEEECCCHHHHHHHCCCEEEECC
TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSFDAESGDAGELLGDGTTRMAET
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QLRSTLASSVEGDGLNTLSDIGISMNVDGELEVDDEKLDDVMANQPGELQALFTGTGDTV
HHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEEEECCCCEE
GIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDERYSSMQDSISSTVDRYRTQFQELD
EECCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMVAEMNQTSSYLTQQLSALG
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ASIASLGVGSGLDLNGLLDQLQEAEQQKLVPIRQQQADQDAKISAYGQLQGALSKVQSS
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHH
ASNLNDPELFNSVTSDVEGDSVSAAATPDAPPGRYDVDVTQLATASSIATQGVDEEAVLN
HCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHC
AGAEASLDVTLNDGTAQNITVEADSTLSDVRDAINASDSGVSASIVFDGSQSRLAIASES
CCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCC
TGAEAGINSVTFNGLDGLALDTATEIQGQDAKLDVNGIAITSDSNQVEEAIQGTTLSLSE
CCCCCCCCCEEECCCCCCEECCHHHCCCCCCEEEECEEEEECCCHHHHHHHCCCEEEECC
TGQSTVTVERDDGAIRDAITGFVDSYNSMKSTADDLTSFDAESGDAGELLGDGTTRMAET
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
QLRSTLASSVEGDGLNTLSDIGISMNVDGELEVDDEKLDDVMANQPGELQALFTGTGDTV
HHHHHHHHHCCCCCCCHHHHCCEEECCCCCEEECHHHHHHHHCCCCCCEEEEEECCCCEE
GIAGRAEEELDTMLGDNGMVENAVTGAEEQMARLDERYSSMQDSISSTVDRYRTQFQELD
EECCCCHHHHHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMVAEMNQTSSYLTQQLSALG
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2193164; 11677609; 1527488; 9878359; 11118149 [H]