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The map label for this gene is ppdD [C]

Identifier: 92112626

GI number: 92112626

Start: 540680

End: 541075

Strand: Direct

Name: ppdD [C]

Synonym: Csal_0493

Alternate gene names: 92112626

Gene position: 540680-541075 (Clockwise)

Preceding gene: 92112625

Following gene: 92112627

Centisome position: 14.63

GC content: 55.05

Gene sequence:

>396_bases
ATGCGTCGAACCCGCGGTTTTACCCTGATCGAGCTGATGATCGTCATGGTCATCATCGGCATCCTGGCGGCGATCGCCAT
TCCCGCGTACACCGAGCATGTGCGCAAGGCGCAGCGGGCCGATGCCCAGGCCACGCTGATGCAGCTGGCGTACTGGATGG
AGCGTCAGTACACGCAAAACAGTATTTACGATACCGATGCCACATTGCCGGAGTCGATGACAGGCGCAAAAGACCCTGAG
AGGGTGTACAAATTCGAGTCCCTACCTAATCCCGATAAAAATAAGGGGGACGGGTTTCTGCTGAAGGCCACACGTATCAA
TAGCCAAAGCGGGGATCAATGTGGCGTGCTGAAGTTGTACGATACCGGGCAAAAACAGCCAGAAAAATGCTGGTGA

Upstream 100 bases:

>100_bases
AACGACGCTACGCAGGTGGTCCGTCCGGCGGCGTCGCGGGCCGCGTGGCGTGCGATCATGCGTTGAGCGTCATGTTTTCG
CCATCACTGGAGGCTGTTCG

Downstream 100 bases:

>100_bases
CACATTGAGAGTCAAGCAATGGCAGGCGCTGCCTTGCTGAGCGTCGCATGATAGATTGCGGGTTTCGCCAGCCAAGAACG
AGTGTCCCTGTGAGTGAATT

Product: methylation

Products: NA

Alternate protein names: Methylation

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MRRTRGFTLIELMIVMVIIGILAAIAIPAYTEHVRKAQRADAQATLMQLAYWMERQYTQNSIYDTDATLPESMTGAKDPE
RVYKFESLPNPDKNKGDGFLLKATRINSQSGDQCGVLKLYDTGQKQPEKCW

Sequences:

>Translated_131_residues
MRRTRGFTLIELMIVMVIIGILAAIAIPAYTEHVRKAQRADAQATLMQLAYWMERQYTQNSIYDTDATLPESMTGAKDPE
RVYKFESLPNPDKNKGDGFLLKATRINSQSGDQCGVLKLYDTGQKQPEKCW
>Mature_131_residues
MRRTRGFTLIELMIVMVIIGILAAIAIPAYTEHVRKAQRADAQATLMQLAYWMERQYTQNSIYDTDATLPESMTGAKDPE
RVYKFESLPNPDKNKGDGFLLKATRINSQSGDQCGVLKLYDTGQKQPEKCW

Specific function: Not Yet Known. [C]

COG id: COG4968

COG function: function code NU; Tfp pilus assembly protein PilE

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14876; Mature: 14876

Theoretical pI: Translated: 8.67; Mature: 8.67

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRTRGFTLIELMIVMVIIGILAAIAIPAYTEHVRKAQRADAQATLMQLAYWMERQYTQN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIYDTDATLPESMTGAKDPERVYKFESLPNPDKNKGDGFLLKATRINSQSGDQCGVLKLY
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEE
DTGQKQPEKCW
CCCCCCCCCCC
>Mature Secondary Structure
MRRTRGFTLIELMIVMVIIGILAAIAIPAYTEHVRKAQRADAQATLMQLAYWMERQYTQN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SIYDTDATLPESMTGAKDPERVYKFESLPNPDKNKGDGFLLKATRINSQSGDQCGVLKLY
CCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEE
DTGQKQPEKCW
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA