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The map label for this gene is ssb [H]

Identifier: 92112583

GI number: 92112583

Start: 497669

End: 498235

Strand: Direct

Name: ssb [H]

Synonym: Csal_0450

Alternate gene names: 92112583

Gene position: 497669-498235 (Clockwise)

Preceding gene: 92112582

Following gene: 92112585

Centisome position: 13.46

GC content: 63.49

Gene sequence:

>567_bases
ATGGCTCGCGGCGTCAACAAGGTCATTCTGATCGGCAACCTCGGTCAGGACCCGGAAGTTCGCTTTCTTCCCTCCGGCAA
CCCGGTATGCAATCTGCGTATCGCGACCACCGACTCGTGGACCGACCGCCAGAGCGGTCAGCGTCAGGAGCGTACCGAAT
GGCACACGGTGGTGATGTTCAACAAGCTGGCGGAAATCGCCCAGCAGTACGTGAAGAAAGGCTCGCGCATCTATATCGAA
GGCCGCCTGCAGACGCGCAAGTGGCAGGGGCAGGACGGTCAGGATCGCTATTCCACCGAAATCGTCGCCAATGACATGCA
GATGCTCGATTCGCGCAGTGGACAGGGAGGCGACTACGCCCAGCCCTCGCAAGGCGCGCCTCAGCAAGGCATGGGCCAGC
CCGGTGGCGCGCCCCAGCAGGGAGGCGGCTACGGTCAGCCTCAGGGCGGTCCGCCGCCGCAGCAGCGTCCCCAGCAGCAG
CCGCCGCAACAGGGCGGGCAGCAGGACAATTATGGCGCTCCCAATCCGGGCAACTTCGATGACTTTGACGACGAGATTCC
GTTCTGA

Upstream 100 bases:

>100_bases
GCAGCGGCTGGACGCGGAGGCGCTGGCCCGCGTTCTGGGTACCGAACCGGATCACAAGCGCGCCTGACGACGGGCGCTTA
ACTATTTCAAGGAGACTCAC

Downstream 100 bases:

>100_bases
GTCGATCGTCTAGTGTTTGAGTCCCAGGCGTTTGGCCAGGCGATGCAGGTTGCCGCTGTCGGTGCGCAAGGCACGGGCGG
TGGCGGCCCAGTTGCCGTCG

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MARGVNKVILIGNLGQDPEVRFLPSGNPVCNLRIATTDSWTDRQSGQRQERTEWHTVVMFNKLAEIAQQYVKKGSRIYIE
GRLQTRKWQGQDGQDRYSTEIVANDMQMLDSRSGQGGDYAQPSQGAPQQGMGQPGGAPQQGGGYGQPQGGPPPQQRPQQQ
PPQQGGQQDNYGAPNPGNFDDFDDEIPF

Sequences:

>Translated_188_residues
MARGVNKVILIGNLGQDPEVRFLPSGNPVCNLRIATTDSWTDRQSGQRQERTEWHTVVMFNKLAEIAQQYVKKGSRIYIE
GRLQTRKWQGQDGQDRYSTEIVANDMQMLDSRSGQGGDYAQPSQGAPQQGMGQPGGAPQQGGGYGQPQGGPPPQQRPQQQ
PPQQGGQQDNYGAPNPGNFDDFDDEIPF
>Mature_187_residues
ARGVNKVILIGNLGQDPEVRFLPSGNPVCNLRIATTDSWTDRQSGQRQERTEWHTVVMFNKLAEIAQQYVKKGSRIYIEG
RLQTRKWQGQDGQDRYSTEIVANDMQMLDSRSGQGGDYAQPSQGAPQQGMGQPGGAPQQGGGYGQPQGGPPPQQRPQQQP
PQQGGQQDNYGAPNPGNFDDFDDEIPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Homo sapiens, GI4507231, Length=121, Percent_Identity=33.8842975206612, Blast_Score=77, Evalue=6e-15,
Organism=Escherichia coli, GI1790494, Length=190, Percent_Identity=49.4736842105263, Blast_Score=162, Evalue=1e-41,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 20700; Mature: 20569

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGVNKVILIGNLGQDPEVRFLPSGNPVCNLRIATTDSWTDRQSGQRQERTEWHTVVMF
CCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHH
NKLAEIAQQYVKKGSRIYIEGRLQTRKWQGQDGQDRYSTEIVANDMQMLDSRSGQGGDYA
HHHHHHHHHHHHCCCEEEEEECEEECEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
QPSQGAPQQGMGQPGGAPQQGGGYGQPQGGPPPQQRPQQQPPQQGGQQDNYGAPNPGNFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
DFDDEIPF
CCCCCCCC
>Mature Secondary Structure 
ARGVNKVILIGNLGQDPEVRFLPSGNPVCNLRIATTDSWTDRQSGQRQERTEWHTVVMF
CCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEECCCCCCCHHCCCHHHHHHHHHHHHH
NKLAEIAQQYVKKGSRIYIEGRLQTRKWQGQDGQDRYSTEIVANDMQMLDSRSGQGGDYA
HHHHHHHHHHHHCCCEEEEEECEEECEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
QPSQGAPQQGMGQPGGAPQQGGGYGQPQGGPPPQQRPQQQPPQQGGQQDNYGAPNPGNFD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCC
DFDDEIPF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9973335; 10952301 [H]