Click here to switch to the map view.

The map label for this gene is secE [H]

Identifier: 92112541

GI number: 92112541

Start: 462764

End: 463132

Strand: Direct

Name: secE [H]

Synonym: Csal_0408

Alternate gene names: 92112541

Gene position: 462764-463132 (Clockwise)

Preceding gene: 92112540

Following gene: 92112542

Centisome position: 12.52

GC content: 62.6

Gene sequence:

>369_bases
ATGAAACAAAGCGCCGAGGTGCAAGGGTCGCGCTACGATGTCGCCAAGTGGGCGCTCGTCGTCATTCTTGTCGTTCTGGC
GGTGGCAGGCAATGCATATTTTGCCGATCAAGCGCTGCTGTATCGCGTGCTGGGCGTCGTGGCACTGGGTGTTGCCGCCG
CTGCGGTTGCCTTGACCACCACCAAGGGGCGTGCCCTGGCCGAGCTGGCACGTGGTTCTCGCAAGGAGATCCGGCGCGTG
GTATGGCCGACGCGCCCCGAGACCATCCAGACAACCGCCATCGTCCTGGTCGCCGTGCTGCTGGTCGGCATCATGCTGTG
GCTGATCGATACGCTTCTCGGCTGGATCATGTCCGGCATCATAGGTTAG

Upstream 100 bases:

>100_bases
TGGGGGTTCGATTCCCTCCTGGCCTGCCAGCCTTCCTCAGCGCTGGTTCTTCCTTTATTCTTTCTTGTTACGCTTGCCGC
GCCTTTAGGAGTCCCTTTCC

Downstream 100 bases:

>100_bases
GAGTTTTCATGTCCAAGCGTTGGTACGTCGTCCACGCCTACTCCGGCTTCGAAAAGCATGTGATGCGCTCCCTGATGGAG
CGCGTCAAGATGTATGGCAT

Product: protein translocase subunit secE/sec61 gamma

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKQSAEVQGSRYDVAKWALVVILVVLAVAGNAYFADQALLYRVLGVVALGVAAAAVALTTTKGRALAELARGSRKEIRRV
VWPTRPETIQTTAIVLVAVLLVGIMLWLIDTLLGWIMSGIIG

Sequences:

>Translated_122_residues
MKQSAEVQGSRYDVAKWALVVILVVLAVAGNAYFADQALLYRVLGVVALGVAAAAVALTTTKGRALAELARGSRKEIRRV
VWPTRPETIQTTAIVLVAVLLVGIMLWLIDTLLGWIMSGIIG
>Mature_122_residues
MKQSAEVQGSRYDVAKWALVVILVVLAVAGNAYFADQALLYRVLGVVALGVAAAAVALTTTKGRALAELARGSRKEIRRV
VWPTRPETIQTTAIVLVAVLLVGIMLWLIDTLLGWIMSGIIG

Specific function: Essential for protein export [H]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secE/SEC61-gamma family [H]

Homologues:

Organism=Escherichia coli, GI1790413, Length=124, Percent_Identity=42.741935483871, Blast_Score=79, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001901
- InterPro:   IPR005807 [H]

Pfam domain/function: PF00584 SecE [H]

EC number: NA

Molecular weight: Translated: 13043; Mature: 13043

Theoretical pI: Translated: 10.62; Mature: 10.62

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSAEVQGSRYDVAKWALVVILVVLAVAGNAYFADQALLYRVLGVVALGVAAAAVALTT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKGRALAELARGSRKEIRRVVWPTRPETIQTTAIVLVAVLLVGIMLWLIDTLLGWIMSGI
CCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IG
CC
>Mature Secondary Structure
MKQSAEVQGSRYDVAKWALVVILVVLAVAGNAYFADQALLYRVLGVVALGVAAAAVALTT
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKGRALAELARGSRKEIRRVVWPTRPETIQTTAIVLVAVLLVGIMLWLIDTLLGWIMSGI
CCCHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]